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Metagenomics and Metaproteomics of Polysaccharide-Degrading Bacteria Mike Cox, Jennifer Edwards, Clive Edwards and Alan McCarthy
 
Cellulose
Chitin
using an  integrated ‘omic’   approach  to examine the presence and diversity of polysaccharide-degrading microorganisms that colonise baits  in situ .
Metagenomics Metaproteomics SIP Isolation Diversity
MetaprotogenomoSIPalomics
Screening Expression Probing
 
Probe design problems Protein Databases Modular Enzymes Large Numbers Diverse Domains Substrate Specificity
GH5 Family Architecture
And Solutions… ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Metaproteomics
 
 
 
 
13 C Cellulose did not degrade 13 C – O bond 16-18 x stronger
Jennifer Edwards Clive Edwards Alan McCarthy Rob Lockhart Paul Loughnane James McDonald Alex de Menezes Lab H, University of Liverpool Aquatic Metagenomics Consortium Bela Tiwari NEBC NERC SGM

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SGM 6/9/07