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International Journal of Electrical, Electronics and Computers
Vol-6, Issue-4 | Jul-Aug, 2021
Available: https://aipublications.com/ijeec/
Peer-Reviewed Journal
ISSN: 2456-2319
https://dx.doi.org/10.22161/eec.64.3 10
Design of MEMS Biosensor for Pathogenic Bacterial
Disease Detection.
Ms. K. R. Katole1
, Mrs. S.P Balwir2
, Mr P. P Manekar3
1,2
Department of ECE, Assistant Professor, Dr. Babasaheb Ambedkar College of Engineering & Research, Nagpur, India
3
WWT Divisoin, Scientist, CSIR, National Environmental Engineering & Research Institute ,Nagpur, India.
Received: 01 Jun 2021; Accepted: 29 Jun 2021; Date of Publication: 05 Jul 2021
©2021 The Author(s). Published by Infogain Publication. This is an open access article under the CC BY license
(https://creativecommons.org/licenses/by/4.0/).
Abstract— In situations of a critical disease outbreak, any time delay in identifying the pathogen can
prove to be risky and has its far-reaching effects on public health systems. There is a need for pathogenic
bacteria detection at the point‐of‐care (POC) using a fast, sensitive, inexpensive, and easy‐to‐use method
that does not require complex infrastructure and well‐trained technicians. For instance, detection of
pneumonia, tuberculosis at acute infection stage has been challenging, since current antibody‐based POC
technologies are not effective due to low concentration of antibodies. In this study, we demonstrated for the
first time a label‐free electrical sensing method that can detect pathogenic bacteria, through MEMS
cantilever technology. The presented method offers a rapid and portable tool that is MEMS biosensor, can
be used as a bacteria detection technology at the hospital and primary care settings.
Keywords— Biosensor, Micro-cantilever, pathogen, MEMS.
I. INTRODUCTION
A Micro-cantilever is a device that can be used as
physical, chemical or biological sensor by detecting the
changes in cantilever bending or vibrational frequency. It
is the miniaturized duplicate of a diving board that moves
up and down at regular intervals. This deflection of micro
cantilever changes when a specific mass of an analyte is
specifically adsorbed on its surface similar to change when
a person steps onto the diving board.
The development of electrochemical micro-sensors in
micro-scale is a revolutionary advancement for non-
destructive and in situ measurements of both absolute
levels and changes in chemical and biological species in
engineered and natural aquatic systems. A needle-type
electrochemical micro-sensor represents one of the most
prominent methods for better understanding fundamental
mechanisms contributing to the rates and magnitude of
liquid-solid (e.g., corrosion and biofilm) interfacial
chemical and biological reactions.
II. PATHOGENIC BACTERIA
The human body is continually exposed to many species
of bacteria but Pathogenic bacteria are those bacteria that
can cause disease. Pathogenic bacteria may cause different
disease like pneumonia, tuberculosis, cholera, anthrax,
leprosy, the bubonic plague and many more. Pneumonia is
a lung disease, caused by infections. The many causes of
pneumonia include bacteria, viruses, fungi, and parasites.
We are concentrating on bacterial pneumonia in this paper.
Also in this paper, we are going to study about the Bacteria
a microorganism made of a single cell, having a variety of
shapes and features, and can live in just about any
environment, including in and on human body.
Most species of bacteria are harmless and are
often beneficial but others can cause infectious diseases.
Streptococcus pneumoniae bacteria are lancet-shaped,
Gram-positive cocci, that are typically observed in pairs
(diplococci) but which may also be found as individual
bacteria or in short chains. Most S. pneumoniae serotypes
can cause disease, but only a minority of serotypes
produce the majority of pneumococcal infections [16].
K. R. Katole et al. Design of MEMS Biosensor for Pathogenic Bacterial Disease Detection
www.aipublications.com Page | 11
Fig.1 Schematic diagram of the virulence factors of S.
pneumoniae [14].
III. OBJECTIVE FRAMING
Objectives of this Research is, to explore the challenges of
existing biosensor and their operation.
1. To expose the recent trends and advancement in the
field of MEMS.
2. To study the different pathogenic bacteria.
3. To study the different micro-cantilevers.
4. Design and simulation of micro-cantilevers with
different specifications using COMSOL software.
5. To implement the designed micro sensor for
pathogen detection.
6. To reduce the time and cost of micro sensor as
compare to the existing one.
IV. METHODOLOGY
Detection of pathogens in liquid medium has significant
applications in medicine (for the monitoring of biomarkers
in body fluids) and in public health (for the monitoring of
disease agents in water). For point-of-care (POC)
diagnostics applications, compact and label-free sensors
that can operate directly with body fluids without requiring
expertise are desired. There are many methods for bio
sensing.
In this study, we proposed to develop a biosensor for
pathogenic bacteria detection.
In the first stage, various pathogenic bacteria will be
analyzed with the help of microbiologist after collecting
various samples.
A micro cantilever will be virtually fabricated and
simulated by using software like Coventor or COMSOL
Here the surface stress-based sensors as bio-chemical
sensors will be developed.
The antibody-antigen interaction on the surface of the
microcantilever generates a quasi-static deflection which
was detected by analyzing the motion of the scanning laser
along the entire length of the cantilever. By analyzing the
intensity of the reflected signal and integrating the
derivative of the topography, one can obtain the profile of
the entire micro-cantilever surface.
The MEMS fabrication needs many techniques which are
used to construct other semiconductor circuits like
oxidation process, diffusion process, ion implantation
process, low-pressure chemical vapor deposition process,
sputtering, etc. Additionally, these sensors use a process
like micromachining.
MEMS cantilever gives quick and exact response based on
bio molecular activities as compare to the conventional
cantilever design [8]. First the Clinical Samples of
streptococcus bacteria to Be Collected. Next proposed
approach is to coat a microcantilever with antibodies that
bind the streptococcus bacteria. When bacteria bind to the
microcantilever, its effective mass changes resulting in
changes in the resonant frequency of the cantilever
vibration [3].
In such cantilever, the settling time of biomolecule, which
is mainly taken by the analyte molecule to settle down on
the sensor surface, decreases and provides rapid detection
of biomolecules. There are two operating mode of
cantilever: static and dynamic. In former, the deflection is
measured by the pressure produced by the biomolecules on
the cantilever surface. In later, the concentration of
biomolecules is measured by detecting the change in
oscillating frequency with respect to the change in mass,
where applied sinusoidal voltage is kept constant. The
deflection at the micro cantilever beam can be monitored
by various methods namely, optical reflection, capacitive
and electron tunneling, interferometric and piezoelectric
based detection. The optical reflection is most effective
method for deflection detection. [8]
There has been increased utilization of nucleic acid-based
biosensors for pathogen detection. Hybridization of
deoxyribonucleic acid (DNA) or ribonucleic acid (RNA)
on the sensor surface causes signal change; and detection
of gene identification sequences using that signal change
can reveal analyte identity [10].
Fig 2: Schematic of Biosensors. [15]
Biomolecula
r layer
Analyte
Output
signal
Elect
rome
chani
cal
l
Biomolecule
supply
B
Sensor
B B B
B
K. R. Katole et al. Design of MEMS Biosensor for Pathogenic Bacterial Disease Detection
www.aipublications.com Page | 12
V. TECHNICAL NOVELTY
Diagnosis and monitoring of complex diseases require
quantitative detection of multiple pathogens. Recent study
has shown that when specific biomolecular binding occurs
on one surface of a microcantilever beam, intermolecular
Nano-mechanics bend the cantilever, which can be
detected.
VI. CONCLUSION
Microbial identification of pathogens causing pneumonia
is an important issue for optimum clinical management of
pneumonia and is a major challenge globally, given the
expanding rate of multidrug-resistant pathogens and the
emergence of new pathogens.
This concludes the study of MEMS microcantilever as a
bio sensor which is applicable for sensing pathogenic
bacteria. The overall goal of this device is to become a
portable platform for pathogenic bacteria detection,
detecting various bio analytes for the disease pneumonia
identification. These MEMS sensors hold advantages such
as low cost of productional due to lesser materials, easy
integration, greater portability, robustness and low power
consumption.
REFERENCES
[1] Erman Timurdogana, B. Erdem Alacab, I. Halil Kavaklic,
Hakan Ureya,∗ .” MEMS biosensor for detection of
Hepatitis A and C viruses in serum”,Biosensors and
BioElectronics Elsevier
[2] Federico Hahn, “Actual Pathogen Detection: Sensors and
Algorithms - a Review”, algorithms ISSN 1999-
4893,www.mdpi.com/journal/algorithms
[3] Chithra & Pallavi S. & A. Amalin Prince, “RF MEMS-
Based Biosensor for Pathogenic Bacteria Detection”,
BioNanoSci.DOI 10.1007/s12668-013-0098-1
[4] Hadi Shafi ee , Muntasir Jahangir , Fatih Inci , ShuQi
Wang , “Acute On-Chip HIV Detection Through Label-
Free
[5] Electrical Sensing of Viral Nano-Lysate”, small 2013, 9,
No. 15, 2553–2563
[6] A.MMoulina S. JO'Sheab M .E Wellanda, “
Microcantilever-based biosensors” ,
Ultramicroscopy,Volume 82, Issues 1–4, February 2000,
Pages 23-31
[7] Jeffary B. H. Tok, “Nano and Microsensor for chemical
and biological Terrorism surveillance”
[8] Guanghua Wu, Ram H.Datar, Karolyn M.Hasen, Thomas
Thundat, Richard J. Cote, Arjun Majumdar,”Bioassay of
Prostate-Specific Antigen(PSA) Using Microcantilevers”,
Nature Biotechnology, VOL.19, No.856,2001.
[9] Deep Kishore Parsediya, Jawar Singh, Pavan Kumar
Kankar, "Simulation and analysis of highly sensitive
MEMS cantilever designs for “in vivo label free”
biosensing” 2nd International Conference on Innovations in
Automation and Mechatronics Engineering, ICIAME 2014.
[10] Luis Castillo-Henríquez 1,2 , Mariana Brenes-Acuña 3 ,
Arianna Castro-Rojas 3 , Rolando Cordero-Salmerón 3 ,
Mary Lopretti-Correa 4 and José Roberto Vega-Baudrit
1,3, ” Biosensors for the Detection of Bacterial and Viral
Clinical Pathogens” Sensors MDPI, December 2020.
[11] Sen Xu, “Electromechanical biosensors for pathogen
detection”, Microchim Acta (2012) 178:245–260 DOI
10.1007/s00604-012-0831-4.
[12] Elif Burcu Aydın1 , Muhammet Aydın1 , Mustafa Kemal
Sezginturk 2, Paper-based devices, chapter six.
[13] Catia Cilloniz , Ignacio Martin-Loeches , Carolina Garcia-
Vidal , Alicia San Jose and Antoni Torres ,”Microbial
Etiology of Pneumonia: Epidemiology, Diagnosis and
Resistance Patterns”, International journal of molecular
science
[14] Saud Bin Abdul Sattar; Sandeep Sharma, “Pneumonia,
Bacterial”, StatPearls publishing LLC
[15] Mark J. Jedrzejas, “ Pneumococcal Virulence Factors:
Structure and Function”, Microbiology and Molecular
Biology Reviews : American Society for Microbiology
(ASM).
[16] Tai- Ran Hsu, “MEMS & Microsystems Design and
Manufacture”, Mc Graw Hill publications.
[17] Mario Ramirez, ”Streptococcus pneumoniae” ,Molecular
Medical Microbiology. DOI:
http://dx.doi.org/10.1016/B978-0-12-397169-2.00086-X.

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Design of MEMS Biosensor for Pathogenic Bacterial Disease Detection

  • 1. International Journal of Electrical, Electronics and Computers Vol-6, Issue-4 | Jul-Aug, 2021 Available: https://aipublications.com/ijeec/ Peer-Reviewed Journal ISSN: 2456-2319 https://dx.doi.org/10.22161/eec.64.3 10 Design of MEMS Biosensor for Pathogenic Bacterial Disease Detection. Ms. K. R. Katole1 , Mrs. S.P Balwir2 , Mr P. P Manekar3 1,2 Department of ECE, Assistant Professor, Dr. Babasaheb Ambedkar College of Engineering & Research, Nagpur, India 3 WWT Divisoin, Scientist, CSIR, National Environmental Engineering & Research Institute ,Nagpur, India. Received: 01 Jun 2021; Accepted: 29 Jun 2021; Date of Publication: 05 Jul 2021 ©2021 The Author(s). Published by Infogain Publication. This is an open access article under the CC BY license (https://creativecommons.org/licenses/by/4.0/). Abstract— In situations of a critical disease outbreak, any time delay in identifying the pathogen can prove to be risky and has its far-reaching effects on public health systems. There is a need for pathogenic bacteria detection at the point‐of‐care (POC) using a fast, sensitive, inexpensive, and easy‐to‐use method that does not require complex infrastructure and well‐trained technicians. For instance, detection of pneumonia, tuberculosis at acute infection stage has been challenging, since current antibody‐based POC technologies are not effective due to low concentration of antibodies. In this study, we demonstrated for the first time a label‐free electrical sensing method that can detect pathogenic bacteria, through MEMS cantilever technology. The presented method offers a rapid and portable tool that is MEMS biosensor, can be used as a bacteria detection technology at the hospital and primary care settings. Keywords— Biosensor, Micro-cantilever, pathogen, MEMS. I. INTRODUCTION A Micro-cantilever is a device that can be used as physical, chemical or biological sensor by detecting the changes in cantilever bending or vibrational frequency. It is the miniaturized duplicate of a diving board that moves up and down at regular intervals. This deflection of micro cantilever changes when a specific mass of an analyte is specifically adsorbed on its surface similar to change when a person steps onto the diving board. The development of electrochemical micro-sensors in micro-scale is a revolutionary advancement for non- destructive and in situ measurements of both absolute levels and changes in chemical and biological species in engineered and natural aquatic systems. A needle-type electrochemical micro-sensor represents one of the most prominent methods for better understanding fundamental mechanisms contributing to the rates and magnitude of liquid-solid (e.g., corrosion and biofilm) interfacial chemical and biological reactions. II. PATHOGENIC BACTERIA The human body is continually exposed to many species of bacteria but Pathogenic bacteria are those bacteria that can cause disease. Pathogenic bacteria may cause different disease like pneumonia, tuberculosis, cholera, anthrax, leprosy, the bubonic plague and many more. Pneumonia is a lung disease, caused by infections. The many causes of pneumonia include bacteria, viruses, fungi, and parasites. We are concentrating on bacterial pneumonia in this paper. Also in this paper, we are going to study about the Bacteria a microorganism made of a single cell, having a variety of shapes and features, and can live in just about any environment, including in and on human body. Most species of bacteria are harmless and are often beneficial but others can cause infectious diseases. Streptococcus pneumoniae bacteria are lancet-shaped, Gram-positive cocci, that are typically observed in pairs (diplococci) but which may also be found as individual bacteria or in short chains. Most S. pneumoniae serotypes can cause disease, but only a minority of serotypes produce the majority of pneumococcal infections [16].
  • 2. K. R. Katole et al. Design of MEMS Biosensor for Pathogenic Bacterial Disease Detection www.aipublications.com Page | 11 Fig.1 Schematic diagram of the virulence factors of S. pneumoniae [14]. III. OBJECTIVE FRAMING Objectives of this Research is, to explore the challenges of existing biosensor and their operation. 1. To expose the recent trends and advancement in the field of MEMS. 2. To study the different pathogenic bacteria. 3. To study the different micro-cantilevers. 4. Design and simulation of micro-cantilevers with different specifications using COMSOL software. 5. To implement the designed micro sensor for pathogen detection. 6. To reduce the time and cost of micro sensor as compare to the existing one. IV. METHODOLOGY Detection of pathogens in liquid medium has significant applications in medicine (for the monitoring of biomarkers in body fluids) and in public health (for the monitoring of disease agents in water). For point-of-care (POC) diagnostics applications, compact and label-free sensors that can operate directly with body fluids without requiring expertise are desired. There are many methods for bio sensing. In this study, we proposed to develop a biosensor for pathogenic bacteria detection. In the first stage, various pathogenic bacteria will be analyzed with the help of microbiologist after collecting various samples. A micro cantilever will be virtually fabricated and simulated by using software like Coventor or COMSOL Here the surface stress-based sensors as bio-chemical sensors will be developed. The antibody-antigen interaction on the surface of the microcantilever generates a quasi-static deflection which was detected by analyzing the motion of the scanning laser along the entire length of the cantilever. By analyzing the intensity of the reflected signal and integrating the derivative of the topography, one can obtain the profile of the entire micro-cantilever surface. The MEMS fabrication needs many techniques which are used to construct other semiconductor circuits like oxidation process, diffusion process, ion implantation process, low-pressure chemical vapor deposition process, sputtering, etc. Additionally, these sensors use a process like micromachining. MEMS cantilever gives quick and exact response based on bio molecular activities as compare to the conventional cantilever design [8]. First the Clinical Samples of streptococcus bacteria to Be Collected. Next proposed approach is to coat a microcantilever with antibodies that bind the streptococcus bacteria. When bacteria bind to the microcantilever, its effective mass changes resulting in changes in the resonant frequency of the cantilever vibration [3]. In such cantilever, the settling time of biomolecule, which is mainly taken by the analyte molecule to settle down on the sensor surface, decreases and provides rapid detection of biomolecules. There are two operating mode of cantilever: static and dynamic. In former, the deflection is measured by the pressure produced by the biomolecules on the cantilever surface. In later, the concentration of biomolecules is measured by detecting the change in oscillating frequency with respect to the change in mass, where applied sinusoidal voltage is kept constant. The deflection at the micro cantilever beam can be monitored by various methods namely, optical reflection, capacitive and electron tunneling, interferometric and piezoelectric based detection. The optical reflection is most effective method for deflection detection. [8] There has been increased utilization of nucleic acid-based biosensors for pathogen detection. Hybridization of deoxyribonucleic acid (DNA) or ribonucleic acid (RNA) on the sensor surface causes signal change; and detection of gene identification sequences using that signal change can reveal analyte identity [10]. Fig 2: Schematic of Biosensors. [15] Biomolecula r layer Analyte Output signal Elect rome chani cal l Biomolecule supply B Sensor B B B B
  • 3. K. R. Katole et al. Design of MEMS Biosensor for Pathogenic Bacterial Disease Detection www.aipublications.com Page | 12 V. TECHNICAL NOVELTY Diagnosis and monitoring of complex diseases require quantitative detection of multiple pathogens. Recent study has shown that when specific biomolecular binding occurs on one surface of a microcantilever beam, intermolecular Nano-mechanics bend the cantilever, which can be detected. VI. CONCLUSION Microbial identification of pathogens causing pneumonia is an important issue for optimum clinical management of pneumonia and is a major challenge globally, given the expanding rate of multidrug-resistant pathogens and the emergence of new pathogens. This concludes the study of MEMS microcantilever as a bio sensor which is applicable for sensing pathogenic bacteria. The overall goal of this device is to become a portable platform for pathogenic bacteria detection, detecting various bio analytes for the disease pneumonia identification. These MEMS sensors hold advantages such as low cost of productional due to lesser materials, easy integration, greater portability, robustness and low power consumption. REFERENCES [1] Erman Timurdogana, B. Erdem Alacab, I. Halil Kavaklic, Hakan Ureya,∗ .” MEMS biosensor for detection of Hepatitis A and C viruses in serum”,Biosensors and BioElectronics Elsevier [2] Federico Hahn, “Actual Pathogen Detection: Sensors and Algorithms - a Review”, algorithms ISSN 1999- 4893,www.mdpi.com/journal/algorithms [3] Chithra & Pallavi S. & A. Amalin Prince, “RF MEMS- Based Biosensor for Pathogenic Bacteria Detection”, BioNanoSci.DOI 10.1007/s12668-013-0098-1 [4] Hadi Shafi ee , Muntasir Jahangir , Fatih Inci , ShuQi Wang , “Acute On-Chip HIV Detection Through Label- Free [5] Electrical Sensing of Viral Nano-Lysate”, small 2013, 9, No. 15, 2553–2563 [6] A.MMoulina S. JO'Sheab M .E Wellanda, “ Microcantilever-based biosensors” , Ultramicroscopy,Volume 82, Issues 1–4, February 2000, Pages 23-31 [7] Jeffary B. H. Tok, “Nano and Microsensor for chemical and biological Terrorism surveillance” [8] Guanghua Wu, Ram H.Datar, Karolyn M.Hasen, Thomas Thundat, Richard J. Cote, Arjun Majumdar,”Bioassay of Prostate-Specific Antigen(PSA) Using Microcantilevers”, Nature Biotechnology, VOL.19, No.856,2001. [9] Deep Kishore Parsediya, Jawar Singh, Pavan Kumar Kankar, "Simulation and analysis of highly sensitive MEMS cantilever designs for “in vivo label free” biosensing” 2nd International Conference on Innovations in Automation and Mechatronics Engineering, ICIAME 2014. [10] Luis Castillo-Henríquez 1,2 , Mariana Brenes-Acuña 3 , Arianna Castro-Rojas 3 , Rolando Cordero-Salmerón 3 , Mary Lopretti-Correa 4 and José Roberto Vega-Baudrit 1,3, ” Biosensors for the Detection of Bacterial and Viral Clinical Pathogens” Sensors MDPI, December 2020. [11] Sen Xu, “Electromechanical biosensors for pathogen detection”, Microchim Acta (2012) 178:245–260 DOI 10.1007/s00604-012-0831-4. [12] Elif Burcu Aydın1 , Muhammet Aydın1 , Mustafa Kemal Sezginturk 2, Paper-based devices, chapter six. [13] Catia Cilloniz , Ignacio Martin-Loeches , Carolina Garcia- Vidal , Alicia San Jose and Antoni Torres ,”Microbial Etiology of Pneumonia: Epidemiology, Diagnosis and Resistance Patterns”, International journal of molecular science [14] Saud Bin Abdul Sattar; Sandeep Sharma, “Pneumonia, Bacterial”, StatPearls publishing LLC [15] Mark J. Jedrzejas, “ Pneumococcal Virulence Factors: Structure and Function”, Microbiology and Molecular Biology Reviews : American Society for Microbiology (ASM). [16] Tai- Ran Hsu, “MEMS & Microsystems Design and Manufacture”, Mc Graw Hill publications. [17] Mario Ramirez, ”Streptococcus pneumoniae” ,Molecular Medical Microbiology. DOI: http://dx.doi.org/10.1016/B978-0-12-397169-2.00086-X.