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Mariana García Campuzano
Medicine student
Third semester 2019-2
UPB
INTRODUCTION
2
The toxin produced by
them is responsible for
gastrointestinal
diseases associated
with antibiotics
Most important cause
of
pseudomembranous
colitis
Bacterial species of gram
positive bacilli
It is part of the normal
intestinal microbiota in
a small number of
healthy individuals and
hospitalized patients
Anaerobes
Is resistant to most
antibiotics, moreover,
it is able to grow under
those conditions
CLOSTRIDIOIDES DIFFICILE
INTRODUCTION
3
C. difficile infection commonly occurs by
direct contact
with contaminated surfaces, health workers,
visitors or
patient to patient
Contamination of surfaces with toxigenic and
hypervirulent C. difficile strains can generate an
alarm about the acquisition of infection,
particularly in seriously ill patients
GENERAL OBJECTIVE
4
Characterize isolates of
Clostridioides difficile
recovered from
hospitalized patients and the
hospitals environment and air
MATERIALS AND METHODS
5
The study was developed
between April 2016 and August
2017 in 4
tertiary hospitals of Tehran, Iran
*Characteristics of the study
A total of 700 stool samples were
obtained from hospitalized patients
aged between 2 to 95 years old,
suspected of Clostridioides difficile
infection
A total of 1435 environmental
air samples were collected
from hospital surfaces and
equipment .
6
Pulsed field gel electrophoresis process
(PFGE)
For what?
Allow the differentiation and
classification of different genetic
patterns of a microorganism
Materials and methods
Its foundation
Separation of samples of
DNA, RNA or other
macromolecules according
to their size and charge
using a special gel
7
Polymerase Chain Reaction (PCR)
For what?
Amplify a DNA fragment
gene or an RNA through
an in vitro enzymatic
reaction
Its foundation
Replicate strands of DNA
with a DNA polymerase
using a primer
Materials and methods
8
Minimum inhibitory concentration
(MIC)
For what?
Confirm the resistance of
microorganisms to an
antimicrobial agent, and
analize the activity of new
antimicrobial agents
Its foundation
inhibits the growth of a
microorganism after its
incubation
Materials and methods
The isolate PC111 and PC118, include a
identical pulsotype (PT18), that is because
they have the same banding, but respect
to the others, they keep conserving
differences
9
RESULTS
The ones that have more differences are
the pulsotypes PT29 and PT30
10
RESULTS
The isolate ECD41, is resistant to some
antibiotics like Ciprofloxacin, Levofloxacin,
Clindamycin
11
RESULTS
The isolate ECD47 is resistant to
antibiotics like Metronidazole,
Ciprofloxacin, Tetracycline
12
RESULTS
DISCUSSION
13
AUTHOR CONCEPT YES OR NO
Dubberke E.R etal
“Contamination of surfaces
with toxigenic and
hypervirulent C. Difficile strains
can raise an alarm about the
acquisition of infection
particularly in severely-ill
patients”
Bahani A etal
“The antibiotic-resistant
phenotypes of clinical C.
Difficile isolates were
previously recognized in
patients who had been
admitted to the target
hospitals of the current study.”
Fawley W.N etal
“CE-ribotyping was performed
for the isolates that were non-
typeable by PFGE due to DNA
degradation”
Kikuchi E etal
“All the clinical, environmental
and aerial C. difficile isolates
that were phenotypically
confirmed were examined for
C. difficile 16S rDNA specific
gene”
CONCLUSIONS
The study provided evidence of the presence of
the C. difficile population in the hospital air and
its patients, obtaining genetically diverse and
hypervirulent isolates.
14
Investigations as this one shows the impact that
molecular biology has in the medical field,
allowing through its rapid and precise techniques,
the easy obtaining of a clinical diagnosis,
especially when it is a infectious diseases or
cancer.
Diapositivas artículo biología molecular

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Diapositivas artículo biología molecular

  • 1. Mariana García Campuzano Medicine student Third semester 2019-2 UPB
  • 2. INTRODUCTION 2 The toxin produced by them is responsible for gastrointestinal diseases associated with antibiotics Most important cause of pseudomembranous colitis Bacterial species of gram positive bacilli It is part of the normal intestinal microbiota in a small number of healthy individuals and hospitalized patients Anaerobes Is resistant to most antibiotics, moreover, it is able to grow under those conditions CLOSTRIDIOIDES DIFFICILE
  • 3. INTRODUCTION 3 C. difficile infection commonly occurs by direct contact with contaminated surfaces, health workers, visitors or patient to patient Contamination of surfaces with toxigenic and hypervirulent C. difficile strains can generate an alarm about the acquisition of infection, particularly in seriously ill patients
  • 4. GENERAL OBJECTIVE 4 Characterize isolates of Clostridioides difficile recovered from hospitalized patients and the hospitals environment and air
  • 5. MATERIALS AND METHODS 5 The study was developed between April 2016 and August 2017 in 4 tertiary hospitals of Tehran, Iran *Characteristics of the study A total of 700 stool samples were obtained from hospitalized patients aged between 2 to 95 years old, suspected of Clostridioides difficile infection A total of 1435 environmental air samples were collected from hospital surfaces and equipment .
  • 6. 6 Pulsed field gel electrophoresis process (PFGE) For what? Allow the differentiation and classification of different genetic patterns of a microorganism Materials and methods Its foundation Separation of samples of DNA, RNA or other macromolecules according to their size and charge using a special gel
  • 7. 7 Polymerase Chain Reaction (PCR) For what? Amplify a DNA fragment gene or an RNA through an in vitro enzymatic reaction Its foundation Replicate strands of DNA with a DNA polymerase using a primer Materials and methods
  • 8. 8 Minimum inhibitory concentration (MIC) For what? Confirm the resistance of microorganisms to an antimicrobial agent, and analize the activity of new antimicrobial agents Its foundation inhibits the growth of a microorganism after its incubation Materials and methods
  • 9. The isolate PC111 and PC118, include a identical pulsotype (PT18), that is because they have the same banding, but respect to the others, they keep conserving differences 9 RESULTS
  • 10. The ones that have more differences are the pulsotypes PT29 and PT30 10 RESULTS
  • 11. The isolate ECD41, is resistant to some antibiotics like Ciprofloxacin, Levofloxacin, Clindamycin 11 RESULTS
  • 12. The isolate ECD47 is resistant to antibiotics like Metronidazole, Ciprofloxacin, Tetracycline 12 RESULTS
  • 13. DISCUSSION 13 AUTHOR CONCEPT YES OR NO Dubberke E.R etal “Contamination of surfaces with toxigenic and hypervirulent C. Difficile strains can raise an alarm about the acquisition of infection particularly in severely-ill patients” Bahani A etal “The antibiotic-resistant phenotypes of clinical C. Difficile isolates were previously recognized in patients who had been admitted to the target hospitals of the current study.” Fawley W.N etal “CE-ribotyping was performed for the isolates that were non- typeable by PFGE due to DNA degradation” Kikuchi E etal “All the clinical, environmental and aerial C. difficile isolates that were phenotypically confirmed were examined for C. difficile 16S rDNA specific gene”
  • 14. CONCLUSIONS The study provided evidence of the presence of the C. difficile population in the hospital air and its patients, obtaining genetically diverse and hypervirulent isolates. 14 Investigations as this one shows the impact that molecular biology has in the medical field, allowing through its rapid and precise techniques, the easy obtaining of a clinical diagnosis, especially when it is a infectious diseases or cancer.

Editor's Notes

  1. Caracteristicas del estudio y muestras ambientales
  2. Caracteristicas del estudio y muestras ambientales
  3. Caracteristicas del estudio y muestras ambientales