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Juan Esteban Restrepo Ruiz
Biologia Molecular
Facultad de Medicina UPB
2018
Introduction.
Mutagenesis Lymphoblasts Radiation
Introduction.
In the experiment they put certain cell lines to grow in different media
that were irradiated. These cells were specifically lines of
lymphoblasts and E. coli.
Finally they evaluated the mutation effects of growing in different
media that was treated with processes of radiation.
Objective.
Evaluate the effect of high dose irradiated meat samples (HIDMS) on
simple model systems including wild type E. coli cells and human
lymphoblast cell line.
Materials.
1.Procurement, processing and
gamma irradiation of meat sample
● Gamma radiation (25kGy) was carried
out at dry ice (-78.5°C) condition in a
cobalt-60 Food Package Irradiator
● Irradiation at 25 kGy is the maximum
approved dose for any food commodity
by Indian Law.
Obtain the culture media .
2. Preparation of human S9 liver
mix.
● The liver was prepared homogenizing
fresh human liver and centrifuging the
homogenate at 9000 g for 20 minutes
at 4°C
● Supernatant contains microsomes
comprised of mixed function oxidases
.
Obtain the Cytochrome P450 enzymes.
Materials.
3.RNA polymerase beta subunit
(rpoB) based forward mutation assay
● Wild type E. coli cells were grown in
liver S9 metabolic activated fresh meat
medium.
● Mutagenicity was assayed by rpoB
RNA polymerase based forward
mutation detection assay where cells
acquire rifampicin resistant phenotype
upon mutation in this gene
Evaluate the number of mutant E. coli
cells that acquire the rifampicin
resistant phenotype
4.DPAR mutation assay
● E. coli cells transformed with
pBR322 plasmid DNA.
● The cells grew in LB culture
media in the presence of
antibiotics (ampicillin) in the
presence of known mutagen or a
test compound and compared for
frequency of the colonies
displaying resistance to the
another antibiotics (tetracycline)
on LB-agar selection plates.
Mutagenic exposure leads to significant
variation in the antibiotics resistance
frequency of cells with respect to these two
antibiotics in a culture and observed variation
indicates the mutation frequency.
Materials.
5.Sequencing of pBR322 plasmid encoded
tcR gene PCR amplified from E. coli
transformed cells grown on HDIMS.
● E. coli transformants were grown
exclusively on HDIMS broth, and
subsequently subcultured till 1500
generations in the same medium
supplemented with ampicillin.
Obtain the plasmid sequencing with
PCR from the E. coli cells that grown
on the meat irradiated samples.
6. RAPD analysis of E. coli genome from
1500 generations HDIMS grown cells.
● The DNA was isolated from E. coli
using phenol-chloroform extraction.
● The DNA was subjected to RAPD
analysis using random primers.
● PCR programs.
Amplify random regions of the genome.
Materials.
7.Human lymphoblast mutation
(HLM) assay.
● Human Lymphoblast TK6 line.
● Analysis of mutations at two different
loci (tk+/- and hprt+).
● Ethyl methanesulfonate and 5-
azacytidine were used as mutagens
(positive controls).
This process was made to obtain the
culture media were the different cell
lines will grew up.
Obtain mutant lymphoblasts cells
Results. 1.Mutation frequency in E. coli MG1655 (ATCC 700926) cells.
Results.
2.Differential loss of Antibiotic Resistance (DPAR) assay in pBR322 transformed E.
coli MG1655 (ATCC 700926) cells and maintained up to 1500 generations
on HDIMS broth medium.
Results. 3.RAPD analysis of E. coli MG1655 (ATCC 700926) genome with primers
Results. 4.Assessment of mutagenicity in human lymphoblast cell line TK6 (ATCC CRL-8015).
tk -/+
hprt-/+
Different
irradiation
Discussion.
Author Idea Yes or No
Kanatt et al. 2010 Irradiation of meat samples is an
important technique to ensure its safety
and also extended shelf life.
Al-Amer et al. 2016 Among the meat samples studied,
chicken and mutton contains about six
time more fats as compared to fishes
and prawns
Saxena et al. 2016 In case of positive controls where TK6
cells were exposed to 5-AZ or EMS,
cellular aggregation was observed in
both the samples, indicating
mutagenesis
Poling et al. 1995 Three generations of
albino rats were fed electron beam
sterilized raw ground beef where no
evidence of toxicity or decrease in
nutritional value of the raw meat due to
irradiation treatment was observed
Conclusion.
● None of the assays indicated any mutagenesis due to HDIMS.
● The findings thus affiermed the genotoxic safety of HDIMS .
● This technology is known to have excellent potential to ensure postharvest food preservation.
➢ Food irradiation program always remained underutilized since inception. Misconceived
apprehension pertaining to the safety of irradiated food for human consumption seems to be
one of the underlying causes.
➢ Food irradiation has positioned itself as one of the best mechanisms to protect consumers from
pathogens.
Lack of induced mutagenesis-Seminario Biología Molecular-Juan Restrepo Ruiz

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Lack of induced mutagenesis-Seminario Biología Molecular-Juan Restrepo Ruiz

  • 1. Juan Esteban Restrepo Ruiz Biologia Molecular Facultad de Medicina UPB 2018
  • 3. Introduction. In the experiment they put certain cell lines to grow in different media that were irradiated. These cells were specifically lines of lymphoblasts and E. coli. Finally they evaluated the mutation effects of growing in different media that was treated with processes of radiation.
  • 4. Objective. Evaluate the effect of high dose irradiated meat samples (HIDMS) on simple model systems including wild type E. coli cells and human lymphoblast cell line.
  • 5. Materials. 1.Procurement, processing and gamma irradiation of meat sample ● Gamma radiation (25kGy) was carried out at dry ice (-78.5°C) condition in a cobalt-60 Food Package Irradiator ● Irradiation at 25 kGy is the maximum approved dose for any food commodity by Indian Law. Obtain the culture media . 2. Preparation of human S9 liver mix. ● The liver was prepared homogenizing fresh human liver and centrifuging the homogenate at 9000 g for 20 minutes at 4°C ● Supernatant contains microsomes comprised of mixed function oxidases . Obtain the Cytochrome P450 enzymes.
  • 6. Materials. 3.RNA polymerase beta subunit (rpoB) based forward mutation assay ● Wild type E. coli cells were grown in liver S9 metabolic activated fresh meat medium. ● Mutagenicity was assayed by rpoB RNA polymerase based forward mutation detection assay where cells acquire rifampicin resistant phenotype upon mutation in this gene Evaluate the number of mutant E. coli cells that acquire the rifampicin resistant phenotype 4.DPAR mutation assay ● E. coli cells transformed with pBR322 plasmid DNA. ● The cells grew in LB culture media in the presence of antibiotics (ampicillin) in the presence of known mutagen or a test compound and compared for frequency of the colonies displaying resistance to the another antibiotics (tetracycline) on LB-agar selection plates. Mutagenic exposure leads to significant variation in the antibiotics resistance frequency of cells with respect to these two antibiotics in a culture and observed variation indicates the mutation frequency.
  • 7. Materials. 5.Sequencing of pBR322 plasmid encoded tcR gene PCR amplified from E. coli transformed cells grown on HDIMS. ● E. coli transformants were grown exclusively on HDIMS broth, and subsequently subcultured till 1500 generations in the same medium supplemented with ampicillin. Obtain the plasmid sequencing with PCR from the E. coli cells that grown on the meat irradiated samples. 6. RAPD analysis of E. coli genome from 1500 generations HDIMS grown cells. ● The DNA was isolated from E. coli using phenol-chloroform extraction. ● The DNA was subjected to RAPD analysis using random primers. ● PCR programs. Amplify random regions of the genome.
  • 8. Materials. 7.Human lymphoblast mutation (HLM) assay. ● Human Lymphoblast TK6 line. ● Analysis of mutations at two different loci (tk+/- and hprt+). ● Ethyl methanesulfonate and 5- azacytidine were used as mutagens (positive controls). This process was made to obtain the culture media were the different cell lines will grew up. Obtain mutant lymphoblasts cells
  • 9. Results. 1.Mutation frequency in E. coli MG1655 (ATCC 700926) cells.
  • 10. Results. 2.Differential loss of Antibiotic Resistance (DPAR) assay in pBR322 transformed E. coli MG1655 (ATCC 700926) cells and maintained up to 1500 generations on HDIMS broth medium.
  • 11. Results. 3.RAPD analysis of E. coli MG1655 (ATCC 700926) genome with primers
  • 12. Results. 4.Assessment of mutagenicity in human lymphoblast cell line TK6 (ATCC CRL-8015). tk -/+ hprt-/+ Different irradiation
  • 13. Discussion. Author Idea Yes or No Kanatt et al. 2010 Irradiation of meat samples is an important technique to ensure its safety and also extended shelf life. Al-Amer et al. 2016 Among the meat samples studied, chicken and mutton contains about six time more fats as compared to fishes and prawns Saxena et al. 2016 In case of positive controls where TK6 cells were exposed to 5-AZ or EMS, cellular aggregation was observed in both the samples, indicating mutagenesis Poling et al. 1995 Three generations of albino rats were fed electron beam sterilized raw ground beef where no evidence of toxicity or decrease in nutritional value of the raw meat due to irradiation treatment was observed
  • 14. Conclusion. ● None of the assays indicated any mutagenesis due to HDIMS. ● The findings thus affiermed the genotoxic safety of HDIMS . ● This technology is known to have excellent potential to ensure postharvest food preservation. ➢ Food irradiation program always remained underutilized since inception. Misconceived apprehension pertaining to the safety of irradiated food for human consumption seems to be one of the underlying causes. ➢ Food irradiation has positioned itself as one of the best mechanisms to protect consumers from pathogens.

Editor's Notes

  1. Mutagenesis: is a process by which the genetic information of an organism is changed resulting in a mutation.
  2. An aliquot of the culture medium was spread plated on Luria agar plates containing rifampicin. Mutation frequency was determined as the ratio of total number of rifampicin resistan mutants per ml of the culture to the total number of viable cells per ml. The mutagens used in the experiment were HDIMS, and EMS.
  3. The primers used on the RAPD are arbitrary sequences of synthetic DNA..
  4. These mutant cells divide and form cellular aggregates gates (in suspension) through de novo synthesis of nucleotides which were visualized under an inverted microscope.