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Class 3
Reactions
of
amino acids
COOH
HCH3N
+
R
COOH
HH2N
R
C
COO
_
HCH2N
R
Low pH
Acidic
High pH
Basic
Amino acid
Anionic form
Cationic form
Ionization of amino
acids
What is Zwitter ion?
What is Amphoteric molecule?
What is Isoelectric pH?
Peptide bondsPeptide bonds
 Different types of amino acidsDifferent types of amino acids
undergo polymerization byundergo polymerization by
peptide bond formationpeptide bond formation
 Peptide bonds are importantPeptide bonds are important
part of protein structure.part of protein structure.
 If they are broken orIf they are broken or
hydrolyzed it degradehydrolyzed it degrade
proteinprotein
Amino acids
Dipeptide
Tripeptides
Peptides
Polypeptides
(Proteins)
PeptidebondPeptidebond
formationformation
H
H2N
R
C C OH
OII
COOH
H
R
CN
H
H
H
H2N
R
C C
O
II
COOH
H
R
CN
H
HO H
PeptidesPeptides
 Composed of small number of amino acidsComposed of small number of amino acids
 Linkage is peptide bondsLinkage is peptide bonds
 Synthesized in bodySynthesized in body
 Have specific functionHave specific function
 Digestion of protein also leadsDigestion of protein also leads
Biologically IMP peptidesBiologically IMP peptides
Examples and BiomedicalExamples and Biomedical
importanceimportance
 HormoneHormone : Insulin, glucagon, Vasopressin,: Insulin, glucagon, Vasopressin,
OxytocinOxytocin
 AntioxidantAntioxidant : Glutathione: Glutathione
 AntibioticsAntibiotics : Gramicidin S: Gramicidin S
 Anti-tumor drugAnti-tumor drug : Bleomycin: Bleomycin
 Sweetening agentSweetening agent : Aspartame: Aspartame
Biologically IMP peptidesBiologically IMP peptides
 TripeptideTripeptide : Glutamic acid, Cysteine and Glycine: Glutamic acid, Cysteine and Glycine
 Reduced form asReduced form as GSHGSH
 Oxidised form asOxidised form as GS-SGGS-SG
 Characterised by Gama peptide bonds,Characterised by Gama peptide bonds,
 not digestednot digested by peptidaseby peptidase
 Found in all cell except nerve cellFound in all cell except nerve cell
 Biological antioxidant, Amino acid absorptionBiological antioxidant, Amino acid absorption
GlutathioneGlutathione
Biologically IMP peptidesBiologically IMP peptides
 FunctionsFunctions::
 1.1. CoenzymeCoenzyme in oxidation reduction reactionin oxidation reduction reaction
 2. Maintains Red Cell2. Maintains Red Cell Membrane integrityMembrane integrity
 3.3. Protects HBProtects HB against Oxidationagainst Oxidation
 4. Free radical and peroxide4. Free radical and peroxide scavangingscavanging
 5.5. DetoxicationDetoxication
GlutathioneGlutathione
Hemolytic anemia due to G6PD deficiency
InsulinInsulin
 fromfrom ββ cell ofcell of pancreaspancreas
 ContainsContains 30 + 2130 + 21 amino acidsamino acids
 Hypoglycemic HormoneHypoglycemic Hormone
GlucagonGlucagon
 fromfrom αα cell ofcell of pancreaspancreas
 Contains 29 amino acidsContains 29 amino acids
 Hyper glycemic hormoneHyper glycemic hormone
AngiotensinAngiotensin
 Angiotensinogen synthesized by liverAngiotensinogen synthesized by liver
 Angiotensinogen to angiotensin I by Renin (10 AAs)Angiotensinogen to angiotensin I by Renin (10 AAs)
 Angiotensin I to II by ACEAngiotensin I to II by ACE (Angiotensin converting enzyme)(Angiotensin converting enzyme)
 Angiotensin II active form Have 8 AAsAngiotensin II active form Have 8 AAs
 Vaso-constructor increase arterial pressureVaso-constructor increase arterial pressure
 Increase synthesis of Aldosteron -Na+ retentionIncrease synthesis of Aldosteron -Na+ retention
 ACE inhibitors used as antihypertensive & CCFACE inhibitors used as antihypertensive & CCF
OxytocinOxytocin
 Hormone of posterior pituitaryHormone of posterior pituitary
 ContainsContains 99 amino acidsamino acids
 Stimulates contraction of uterusStimulates contraction of uterus
 Hormone secreted by posterior pituitary
 Contains 9 amino acids
 Decreases GFR and retains body water
 Increases Blood pressure
Vasopressin (ADH)Vasopressin (ADH)
CorticotropinCorticotropin
 Hormone of Anterior pituitaryHormone of Anterior pituitary
 ContainsContains 3939 amino acidsamino acids
 Stimulates adrenal cortex for secretion of steroidStimulates adrenal cortex for secretion of steroid
hormoneshormones
TRHTRH
 Hypothalamic hormoneHypothalamic hormone
 ContainsContains 33 amino acidsamino acids
 Stimulates release of thyrotropin from anteriorStimulates release of thyrotropin from anterior
pituitarypituitary
GastrinGastrin
 Local hormone from StomachLocal hormone from Stomach
 Stimulates production of gastric juiceStimulates production of gastric juice
SecretinSecretin
 G I PeptideG I Peptide
 Stimulates secretion of pancreatic juiceStimulates secretion of pancreatic juice
BradykininBradykinin
 Contains 9 amino acidsContains 9 amino acids
 Formed in bloodFormed in blood
 Power full vasodilatorPower full vasodilator
 Causes contraction of smooth musclesCauses contraction of smooth muscles
 Stimulates pain receptorsStimulates pain receptors
EnkephalinsEnkephalins
 Peptide formed in CNSPeptide formed in CNS
 Binds to certain receptors in brain andBinds to certain receptors in brain and
induces analgesia (Killing pain sensation)induces analgesia (Killing pain sensation)
KallidinKallidin
 Contains 10 amino acidsContains 10 amino acids
 Power full vasodilatorPower full vasodilator
AspartameAspartame
 Di-peptide,Di-peptide,
 Neutra sweet, artificial sweetenerNeutra sweet, artificial sweetener
 L aspartyl phenylalanyl methyl esterL aspartyl phenylalanyl methyl ester
 Not suitable for phenylketourics.Not suitable for phenylketourics.
Important reactionsImportant reactions
ofof
Amino acidsAmino acids
DeaminationDeamination
 Removal of amino groupRemoval of amino group from amino acid byfrom amino acid by
enzyme to forms keto acidenzyme to forms keto acid
 Deamination:1.Deamination:1. OxidativeOxidative deaminationdeamination
2.2. Non oxidativeNon oxidative deaminationdeamination
Glutamate α keto glutarate
NH2
Amino acid deaminase
TransaminationTransamination
 Transfer of amino group of one amino acid to aTransfer of amino group of one amino acid to a
keto acidketo acid
 Result in formation of new amino acid and a ketoResult in formation of new amino acid and a keto
acidacid
 Enzymes : Transaminase orEnzymes : Transaminase or
Amino transferaseAmino transferase
 Coenzymes : Pyridoxal phosphateCoenzymes : Pyridoxal phosphate
 Advantage: Non essential amino acid synthesisAdvantage: Non essential amino acid synthesis
 Interconversion of amino acidsInterconversion of amino acids
Amino acid
α ketoacid Amino acid
α ketoacid
Amino transferase
Pyridoxal phosphate
General reaction
Alanine
α ketoglutarate
L- Glutamate
Pyruvate
Alanine
transaminase
Pyridoxal phosphate
Reaction with ammoniaReaction with ammonia
 Acidic amino acids reacts with NHAcidic amino acids reacts with NH33 to formto form
amide.amide.
 They are part of protein structureThey are part of protein structure
 Serve as source of NitrogenServe as source of Nitrogen
L- Glutamate
L- Glutamine
α keto glutarate
NH3NH3
Enzyme - Glutaminase
DesulphurationDesulphuration
 Sulphur containing amino acid during theirSulphur containing amino acid during their
catabolism oxidises sulph-hydryl group to formcatabolism oxidises sulph-hydryl group to form
keto acid.keto acid.
C
COOH
CH2
SH
NH2H
SH2
COOH
CH3
NHC
COOH
CH2
NH2C
COOH
CH3
C O
Cysteine
Desulphurase
Imino acid
Keto acid
DecarboxylationDecarboxylation
 Removal of coo group to form aminesRemoval of coo group to form amines
 EnzymesEnzymes : Amino acid decarboxylase: Amino acid decarboxylase
 CoenzymeCoenzyme : Pyridoxal phosphate: Pyridoxal phosphate
GlutamateGlutamate GABAGABA
NeurotransmitterNeurotransmitter
HistidineHistidine HistamineHistamine
Effect on BP, Allergic condEffect on BP, Allergic cond
TyrosineTyrosine TyramineTyramine
Contracts uterusContracts uterus
TryptophanTryptophan TryptamineTryptamine
Serotonin, NTSerotonin, NT
Decarboxylas
e
PLP
CO2
Colour reactions of amino acidsColour reactions of amino acids
Biuret reactionBiuret reaction Peptide bondsPeptide bonds
Ninhydrine reactionNinhydrine reaction Free amino groupsFree amino groups
Xanthoproteic reactionXanthoproteic reaction Aromatic amino acidsAromatic amino acids
Millon’s reactionMillon’s reaction TyrosineTyrosine
Hopkins – cole reactionHopkins – cole reaction Tryptophan – indole ringTryptophan – indole ring
Sakaguchi’s reactionSakaguchi’s reaction Arginine – guanidino groupArginine – guanidino group
Nitroprusside reactionNitroprusside reaction Free SH groupFree SH group
Pauly’s reactionPauly’s reaction Histidine – imidazole groupHistidine – imidazole group
Lead acetate reactionLead acetate reaction SH groupSH group
Biologically important compounds fromBiologically important compounds from
amino acidsamino acids
GlycineGlycine Heme, Purine base, Bile salt,Heme, Purine base, Bile salt,
GlutathioneGlutathione
Aspartic andAspartic and
Glutamic acidGlutamic acid
Purine, pyrimidine basesPurine, pyrimidine bases
TyrosineTyrosine Thyroxine, Adrenaline, Melaniine,Thyroxine, Adrenaline, Melaniine,
TryptamineTryptamine
TryptophaneTryptophane Niacin, SerotoninNiacin, Serotonin
Arginine,Arginine,
Methionine, GlycineMethionine, Glycine
CreatineCreatine
Last edited Nov 2018
1. Describe biomedical significance of five biologically active
peptides.
2. List two examples of dipeptide and their biomedical
importance.
3. List amino acids present in glutathione . Write its
significance.
4. What is ADH? Write its function.
5. Define Zwiter ion and write its significance.
6. Explain amphoteric nature of amino acid.
7. List Branched chain and Aromatic amino acids.
8. Describe classification of amino acids.
What is happening? Can you understand?

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Class 3 protein reactions and biopeptides

  • 2. COOH HCH3N + R COOH HH2N R C COO _ HCH2N R Low pH Acidic High pH Basic Amino acid Anionic form Cationic form Ionization of amino acids
  • 3. What is Zwitter ion? What is Amphoteric molecule? What is Isoelectric pH?
  • 4.
  • 5. Peptide bondsPeptide bonds  Different types of amino acidsDifferent types of amino acids undergo polymerization byundergo polymerization by peptide bond formationpeptide bond formation  Peptide bonds are importantPeptide bonds are important part of protein structure.part of protein structure.  If they are broken orIf they are broken or hydrolyzed it degradehydrolyzed it degrade proteinprotein Amino acids Dipeptide Tripeptides Peptides Polypeptides (Proteins)
  • 7. PeptidesPeptides  Composed of small number of amino acidsComposed of small number of amino acids  Linkage is peptide bondsLinkage is peptide bonds  Synthesized in bodySynthesized in body  Have specific functionHave specific function  Digestion of protein also leadsDigestion of protein also leads
  • 9. Examples and BiomedicalExamples and Biomedical importanceimportance  HormoneHormone : Insulin, glucagon, Vasopressin,: Insulin, glucagon, Vasopressin, OxytocinOxytocin  AntioxidantAntioxidant : Glutathione: Glutathione  AntibioticsAntibiotics : Gramicidin S: Gramicidin S  Anti-tumor drugAnti-tumor drug : Bleomycin: Bleomycin  Sweetening agentSweetening agent : Aspartame: Aspartame
  • 10. Biologically IMP peptidesBiologically IMP peptides  TripeptideTripeptide : Glutamic acid, Cysteine and Glycine: Glutamic acid, Cysteine and Glycine  Reduced form asReduced form as GSHGSH  Oxidised form asOxidised form as GS-SGGS-SG  Characterised by Gama peptide bonds,Characterised by Gama peptide bonds,  not digestednot digested by peptidaseby peptidase  Found in all cell except nerve cellFound in all cell except nerve cell  Biological antioxidant, Amino acid absorptionBiological antioxidant, Amino acid absorption GlutathioneGlutathione
  • 11. Biologically IMP peptidesBiologically IMP peptides  FunctionsFunctions::  1.1. CoenzymeCoenzyme in oxidation reduction reactionin oxidation reduction reaction  2. Maintains Red Cell2. Maintains Red Cell Membrane integrityMembrane integrity  3.3. Protects HBProtects HB against Oxidationagainst Oxidation  4. Free radical and peroxide4. Free radical and peroxide scavangingscavanging  5.5. DetoxicationDetoxication GlutathioneGlutathione Hemolytic anemia due to G6PD deficiency
  • 12. InsulinInsulin  fromfrom ββ cell ofcell of pancreaspancreas  ContainsContains 30 + 2130 + 21 amino acidsamino acids  Hypoglycemic HormoneHypoglycemic Hormone GlucagonGlucagon  fromfrom αα cell ofcell of pancreaspancreas  Contains 29 amino acidsContains 29 amino acids  Hyper glycemic hormoneHyper glycemic hormone
  • 13. AngiotensinAngiotensin  Angiotensinogen synthesized by liverAngiotensinogen synthesized by liver  Angiotensinogen to angiotensin I by Renin (10 AAs)Angiotensinogen to angiotensin I by Renin (10 AAs)  Angiotensin I to II by ACEAngiotensin I to II by ACE (Angiotensin converting enzyme)(Angiotensin converting enzyme)  Angiotensin II active form Have 8 AAsAngiotensin II active form Have 8 AAs  Vaso-constructor increase arterial pressureVaso-constructor increase arterial pressure  Increase synthesis of Aldosteron -Na+ retentionIncrease synthesis of Aldosteron -Na+ retention  ACE inhibitors used as antihypertensive & CCFACE inhibitors used as antihypertensive & CCF
  • 14. OxytocinOxytocin  Hormone of posterior pituitaryHormone of posterior pituitary  ContainsContains 99 amino acidsamino acids  Stimulates contraction of uterusStimulates contraction of uterus  Hormone secreted by posterior pituitary  Contains 9 amino acids  Decreases GFR and retains body water  Increases Blood pressure Vasopressin (ADH)Vasopressin (ADH)
  • 15. CorticotropinCorticotropin  Hormone of Anterior pituitaryHormone of Anterior pituitary  ContainsContains 3939 amino acidsamino acids  Stimulates adrenal cortex for secretion of steroidStimulates adrenal cortex for secretion of steroid hormoneshormones TRHTRH  Hypothalamic hormoneHypothalamic hormone  ContainsContains 33 amino acidsamino acids  Stimulates release of thyrotropin from anteriorStimulates release of thyrotropin from anterior pituitarypituitary
  • 16. GastrinGastrin  Local hormone from StomachLocal hormone from Stomach  Stimulates production of gastric juiceStimulates production of gastric juice SecretinSecretin  G I PeptideG I Peptide  Stimulates secretion of pancreatic juiceStimulates secretion of pancreatic juice
  • 17. BradykininBradykinin  Contains 9 amino acidsContains 9 amino acids  Formed in bloodFormed in blood  Power full vasodilatorPower full vasodilator  Causes contraction of smooth musclesCauses contraction of smooth muscles  Stimulates pain receptorsStimulates pain receptors EnkephalinsEnkephalins  Peptide formed in CNSPeptide formed in CNS  Binds to certain receptors in brain andBinds to certain receptors in brain and induces analgesia (Killing pain sensation)induces analgesia (Killing pain sensation)
  • 18. KallidinKallidin  Contains 10 amino acidsContains 10 amino acids  Power full vasodilatorPower full vasodilator AspartameAspartame  Di-peptide,Di-peptide,  Neutra sweet, artificial sweetenerNeutra sweet, artificial sweetener  L aspartyl phenylalanyl methyl esterL aspartyl phenylalanyl methyl ester  Not suitable for phenylketourics.Not suitable for phenylketourics.
  • 20. DeaminationDeamination  Removal of amino groupRemoval of amino group from amino acid byfrom amino acid by enzyme to forms keto acidenzyme to forms keto acid  Deamination:1.Deamination:1. OxidativeOxidative deaminationdeamination 2.2. Non oxidativeNon oxidative deaminationdeamination Glutamate α keto glutarate NH2 Amino acid deaminase
  • 21. TransaminationTransamination  Transfer of amino group of one amino acid to aTransfer of amino group of one amino acid to a keto acidketo acid  Result in formation of new amino acid and a ketoResult in formation of new amino acid and a keto acidacid  Enzymes : Transaminase orEnzymes : Transaminase or Amino transferaseAmino transferase  Coenzymes : Pyridoxal phosphateCoenzymes : Pyridoxal phosphate  Advantage: Non essential amino acid synthesisAdvantage: Non essential amino acid synthesis  Interconversion of amino acidsInterconversion of amino acids
  • 22. Amino acid α ketoacid Amino acid α ketoacid Amino transferase Pyridoxal phosphate General reaction Alanine α ketoglutarate L- Glutamate Pyruvate Alanine transaminase Pyridoxal phosphate
  • 23. Reaction with ammoniaReaction with ammonia  Acidic amino acids reacts with NHAcidic amino acids reacts with NH33 to formto form amide.amide.  They are part of protein structureThey are part of protein structure  Serve as source of NitrogenServe as source of Nitrogen L- Glutamate L- Glutamine α keto glutarate NH3NH3 Enzyme - Glutaminase
  • 24. DesulphurationDesulphuration  Sulphur containing amino acid during theirSulphur containing amino acid during their catabolism oxidises sulph-hydryl group to formcatabolism oxidises sulph-hydryl group to form keto acid.keto acid. C COOH CH2 SH NH2H SH2 COOH CH3 NHC COOH CH2 NH2C COOH CH3 C O Cysteine Desulphurase Imino acid Keto acid
  • 25. DecarboxylationDecarboxylation  Removal of coo group to form aminesRemoval of coo group to form amines  EnzymesEnzymes : Amino acid decarboxylase: Amino acid decarboxylase  CoenzymeCoenzyme : Pyridoxal phosphate: Pyridoxal phosphate GlutamateGlutamate GABAGABA NeurotransmitterNeurotransmitter HistidineHistidine HistamineHistamine Effect on BP, Allergic condEffect on BP, Allergic cond TyrosineTyrosine TyramineTyramine Contracts uterusContracts uterus TryptophanTryptophan TryptamineTryptamine Serotonin, NTSerotonin, NT Decarboxylas e PLP CO2
  • 26. Colour reactions of amino acidsColour reactions of amino acids Biuret reactionBiuret reaction Peptide bondsPeptide bonds Ninhydrine reactionNinhydrine reaction Free amino groupsFree amino groups Xanthoproteic reactionXanthoproteic reaction Aromatic amino acidsAromatic amino acids Millon’s reactionMillon’s reaction TyrosineTyrosine Hopkins – cole reactionHopkins – cole reaction Tryptophan – indole ringTryptophan – indole ring Sakaguchi’s reactionSakaguchi’s reaction Arginine – guanidino groupArginine – guanidino group Nitroprusside reactionNitroprusside reaction Free SH groupFree SH group Pauly’s reactionPauly’s reaction Histidine – imidazole groupHistidine – imidazole group Lead acetate reactionLead acetate reaction SH groupSH group
  • 27. Biologically important compounds fromBiologically important compounds from amino acidsamino acids GlycineGlycine Heme, Purine base, Bile salt,Heme, Purine base, Bile salt, GlutathioneGlutathione Aspartic andAspartic and Glutamic acidGlutamic acid Purine, pyrimidine basesPurine, pyrimidine bases TyrosineTyrosine Thyroxine, Adrenaline, Melaniine,Thyroxine, Adrenaline, Melaniine, TryptamineTryptamine TryptophaneTryptophane Niacin, SerotoninNiacin, Serotonin Arginine,Arginine, Methionine, GlycineMethionine, Glycine CreatineCreatine
  • 28. Last edited Nov 2018 1. Describe biomedical significance of five biologically active peptides. 2. List two examples of dipeptide and their biomedical importance. 3. List amino acids present in glutathione . Write its significance. 4. What is ADH? Write its function. 5. Define Zwiter ion and write its significance. 6. Explain amphoteric nature of amino acid. 7. List Branched chain and Aromatic amino acids. 8. Describe classification of amino acids.
  • 29. What is happening? Can you understand?