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ChemEd X Data: an open web
platform to allow students
discover chemical trends
Xavier Prat-Resina
Center for Learning Innovation
BCCE August 4th 2014
http://chemdata.r.umn.edu/bcce14.pptx
Rochester
U of Minnesota Rochester
• Our new campus is a “little special”
– Started accepting students in 2009 (~120/year)
– One single major in Health Sciences
– Multiple faculty teaching one course: recitation
sessions are spread through the week as
personalized one-to-one help
– Laptop program: all students bring the same
laptop model to class
– No “lecture halls” but discussion
– Downtown: 3rd and 4th floor of a shopping mall
http://chemdata.r.umn.edu
Chemistry: learning the conflict
Often, we remember older problems and apply to new problems the older solution
In an ever changing world older solutions may not be that useful
higher-order thinking is more important than ever
Which line is longer?
“…we should teach them to judge between
conflicting influences. That is the essence of our
subject, for it is rare that a single property governs
the outcome of a reaction. We need to train our
students to judge the likely outcome of conflict” P.
Atkins. Pure Appl. Chem., Vol. 71, No. 6, pp. 927-929, 1999.
“…I assume there are exceptions to this rule
because there is an exception to pretty much
every rule in chemistry.” Gen Chem student.
http://chemdata.r.umn.edu
Data-driven learning
Static, “precooked”
data
1. Look at this graph
2. See what I want you to see
3. Explain how everything perfectly fits
4. No exceptions
Unstructured data
Non-linear
Non-sequential
Open-ended
Remember  Understand  Apply  Analyze
Evaluate
1. Choose some data
2. Represent it
3. Find patterns
4. Find exceptions
The web
http://chemdata.r.umn.edu
Chem Ed X Data
Unstructured but easy to represent, parse and sort data
http://chemdata.r.umn.edu/
Elements, Organic/inorganic comp, reactions (Ac/Base, Redox, Solub)
http://chemdata.r.umn.edu
Unstructured open data
Data Topic
Ionization energies,
atomic radius
Atomic structure
Bond energies, bond length Chemical bond
DHvap, Tboil, dipoles Intermolecular interactions
pKa, Ksp Ionic equilibria
Eo
red Electrochemistry
Sorting, filtering tables
http://chemdata.r.umn.edu
Organic molecules
Based on “Periodic Table Live” graphs http://www.chemeddl.org/resources/ptl/charts/
http://chemdata.r.umn.edu
Periodic table trends
http://chemdata.r.umn.edu
Inorganic molecules
Redox reactions
Acid-Base reactions
http://chemdata.r.umn.edu
Reaction data
All data displayed by Jmol is retrieved from NCI server or
http://chemdata.r.umn.edu
JSmol
Explanatory questions (pre-selected sets of
data. One right answer).
“Why do these molecules show this trend for
property X?”
Problem solving questions:(pre-selected sets
of data. One right answer)
“If the heavier the molecule the larger the heat
capacity. Why does the heat capacity decrease in
the following set of data?”
Show evidence: (open-ended)
Choose a set of molecules that show that hydrogen bonds are stronger than
dipole-dipole interaction but much weaker than ionic bonds.
Building knowledge: (open-ended)
Choose a set of data to describe what molecular properties have an influence in
heat of combustion.
http://chemdata.r.umn.edu
Different questions, different levels
Implementation
What is the effect of mass on boiling points? Select a set of molecules that is
evidence of your statement. (one right answer)
100% students gave the correct answer
• 69.8% selected a set of molecules that was “good evidence”
• Out 30.2% who didn’t. 12.7% chose a set of molecules that was proving the
opposite of what they said. The right answer for the wrong reason.
Questions with one right answer. Two kinds of skills:
1. Skill 1: Design an experiment where you minimize correlation vs causation
2. Skill 2: Interpret the experiment without “external interference”.
What is the effect of linear/branched structure on boiling points? (one right answer)
• 60.3% students gave the correct answer
• 40.0% selected a set of molecules that was “good evidence”
• 15.9% chose a set of molecules that was pointing to the opposite of what they
said. Regardless of if what they said was correct or not.
http://chemdata.r.umn.edu
Implementation
What has a stronger influence? A heavy molecule with a weak intermolecular
force or a light molecule with a strong intermolecular force? Are there
exceptions?
• 60.3% said mass has a stronger influence
• 39.7% said intermolecular forces have a stronger influence
• 50.8% chose molecules that was evidence of their statement
• Out of the other 49.2%: 39.7% was inconclusive, but 9.5% was evidence
of the opposite and didn’t acknowledge the existence of exceptions.
Questions without a right answer. Three kinds of skills:
1. Design an experiment where you minimize correlation vs causation
2. Interpret the experiment without “external interference”.
3. Identify the existence of exceptions.
http://chemdata.r.umn.edu
Conclusions
http://chemdata.r.umn.edu
• Collected properties of organic / Inorganic compounds and reactions
• Representations in plots and 3D Jsmol
• Download data
ChemEd X Data dataset. figshare. http://dx.doi.org/10.6084/m9.figshare.1121665
• Paper: JCE ASAP
http://pubs.acs.org/doi/abs/10.1021/ed500316m
• Future directions
• Include more data to align them with more Chemistry topics
• Quantitative assessment

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ChemEd X Data: An Open Platform for Chemical Trends Discovery

  • 1. ChemEd X Data: an open web platform to allow students discover chemical trends Xavier Prat-Resina Center for Learning Innovation BCCE August 4th 2014 http://chemdata.r.umn.edu/bcce14.pptx Rochester
  • 2. U of Minnesota Rochester • Our new campus is a “little special” – Started accepting students in 2009 (~120/year) – One single major in Health Sciences – Multiple faculty teaching one course: recitation sessions are spread through the week as personalized one-to-one help – Laptop program: all students bring the same laptop model to class – No “lecture halls” but discussion – Downtown: 3rd and 4th floor of a shopping mall http://chemdata.r.umn.edu
  • 3. Chemistry: learning the conflict Often, we remember older problems and apply to new problems the older solution In an ever changing world older solutions may not be that useful higher-order thinking is more important than ever Which line is longer? “…we should teach them to judge between conflicting influences. That is the essence of our subject, for it is rare that a single property governs the outcome of a reaction. We need to train our students to judge the likely outcome of conflict” P. Atkins. Pure Appl. Chem., Vol. 71, No. 6, pp. 927-929, 1999. “…I assume there are exceptions to this rule because there is an exception to pretty much every rule in chemistry.” Gen Chem student. http://chemdata.r.umn.edu
  • 4. Data-driven learning Static, “precooked” data 1. Look at this graph 2. See what I want you to see 3. Explain how everything perfectly fits 4. No exceptions Unstructured data Non-linear Non-sequential Open-ended Remember  Understand  Apply  Analyze Evaluate 1. Choose some data 2. Represent it 3. Find patterns 4. Find exceptions The web http://chemdata.r.umn.edu
  • 5. Chem Ed X Data Unstructured but easy to represent, parse and sort data http://chemdata.r.umn.edu/ Elements, Organic/inorganic comp, reactions (Ac/Base, Redox, Solub) http://chemdata.r.umn.edu Unstructured open data Data Topic Ionization energies, atomic radius Atomic structure Bond energies, bond length Chemical bond DHvap, Tboil, dipoles Intermolecular interactions pKa, Ksp Ionic equilibria Eo red Electrochemistry
  • 7. Based on “Periodic Table Live” graphs http://www.chemeddl.org/resources/ptl/charts/ http://chemdata.r.umn.edu Periodic table trends
  • 10. All data displayed by Jmol is retrieved from NCI server or http://chemdata.r.umn.edu JSmol
  • 11. Explanatory questions (pre-selected sets of data. One right answer). “Why do these molecules show this trend for property X?” Problem solving questions:(pre-selected sets of data. One right answer) “If the heavier the molecule the larger the heat capacity. Why does the heat capacity decrease in the following set of data?” Show evidence: (open-ended) Choose a set of molecules that show that hydrogen bonds are stronger than dipole-dipole interaction but much weaker than ionic bonds. Building knowledge: (open-ended) Choose a set of data to describe what molecular properties have an influence in heat of combustion. http://chemdata.r.umn.edu Different questions, different levels
  • 12. Implementation What is the effect of mass on boiling points? Select a set of molecules that is evidence of your statement. (one right answer) 100% students gave the correct answer • 69.8% selected a set of molecules that was “good evidence” • Out 30.2% who didn’t. 12.7% chose a set of molecules that was proving the opposite of what they said. The right answer for the wrong reason. Questions with one right answer. Two kinds of skills: 1. Skill 1: Design an experiment where you minimize correlation vs causation 2. Skill 2: Interpret the experiment without “external interference”. What is the effect of linear/branched structure on boiling points? (one right answer) • 60.3% students gave the correct answer • 40.0% selected a set of molecules that was “good evidence” • 15.9% chose a set of molecules that was pointing to the opposite of what they said. Regardless of if what they said was correct or not. http://chemdata.r.umn.edu
  • 13. Implementation What has a stronger influence? A heavy molecule with a weak intermolecular force or a light molecule with a strong intermolecular force? Are there exceptions? • 60.3% said mass has a stronger influence • 39.7% said intermolecular forces have a stronger influence • 50.8% chose molecules that was evidence of their statement • Out of the other 49.2%: 39.7% was inconclusive, but 9.5% was evidence of the opposite and didn’t acknowledge the existence of exceptions. Questions without a right answer. Three kinds of skills: 1. Design an experiment where you minimize correlation vs causation 2. Interpret the experiment without “external interference”. 3. Identify the existence of exceptions. http://chemdata.r.umn.edu
  • 14. Conclusions http://chemdata.r.umn.edu • Collected properties of organic / Inorganic compounds and reactions • Representations in plots and 3D Jsmol • Download data ChemEd X Data dataset. figshare. http://dx.doi.org/10.6084/m9.figshare.1121665 • Paper: JCE ASAP http://pubs.acs.org/doi/abs/10.1021/ed500316m • Future directions • Include more data to align them with more Chemistry topics • Quantitative assessment

Editor's Notes

  1. Ref:www.ted.com