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CHAPTER 1
INTRODUCTION
• Biology, the study of life and living things
(organisms)
• Biology is the scientific extension of the human
tendency to connect to and be curious about life.
• The adventure of biology takes us:
• Into a variety of environments to investigate ecosystems
• To the laboratory to examine how organisms work
• Into the microscopic world to explore cells and the
submicroscopic to explore molecules in cells
• Back in time to investigate the history of life.
1.1 What is biology?
• In some ways, biology is the most demanding of all
sciences, partly because living systems are so
complex and partly because biology is an
multidisciplinary science that requires a knowledge
of chemistry, physics, and mathematics.
• Biology is also the science most connected to the
humanities and social sciences.
• The complexity of life is inspiring, but it can be
overwhelming.
• Ten themes cut across all biological fields.
1.2 Branches in biology
Zoology – the study of animals
Botany – the study of plants
Microbiology – the study of microorganisms
Mycology – the study of fungi
Bacteriology – the study of bacteria
Anatomy – study the structure of animals and plants
Taxonomy – classification of organisms
• Histology - ?
• Embryology - ?
• Physiology - ?
• Development biology - ?
• Biochemistry - ?
• Cell biology - ?
• Genetics - ?
• Molecular biology , ecology - ?
1.3 Brief history of life
• Life can be defined in terms of the
characteristics of living organisms
1. Organisms are composed of cells
 Unicellular organisms are composed of a single cell.
 Multicellular organisms are composed of several or
great numbers of cells
 The cell theory was first described by Schleidan and
Schwann in the 1800s.
1. Living organisms grow and develop
 Growth may result from an increase in the number of
cells or in individual cell size
 Development is the process of change during the life
span of the organism
3. Metabolism includes the chemical processes
essential to growth, repair, and reproduction
 The relatively constant internal environment is known
as homeostasis
4. Movement is a basic property of cells
 Movement may result from amoeboid motion, cilia or
flagella
 Muscular systems allow movement
 Some organisms are sessile
5. Organisms respond to stimuli
 Responses of animals are more obvious
 Plants respond to light, gravity, water, touch, and other
stimuli
6. Organisms reproduce
 Life comes from life
 Asexual reproduction does not include gamete fusion
 Most plants and animals reproduce sexually
7. Populations evolve and become adapted to the
environment
 Adaptations may be structural, physiological, and/or
behavioral
order
Evolutionary
adaptation
Response
to the
environment
Reproduction
Growth and
development
Energy
processing
Regulation
• Biology can be viewed as having two dimensions: a
“vertical” dimension covering the size scale from
atoms to the biosphere and a “horizontal” dimension
that stretches across the diversity of life.
• The latter includes not only present day organisms but
those throughout life’s history.
• Evolution makes sense of everything we know about
living organisms
• Organisms living on Earth are modified descendents
of common ancestors
The sign of evolution
• Evolution is the key to understanding biological
diversity.
• The evolutionary connections among all
organisms explain the unity and diversity of life.
• Diversity is a hallmark of life.
• At present, biologists have identified and named about 1.8
million species.
• This includes over 280,000 plants, almost 50,000
vertebrates, and over 750,000 insects.
• Thousands of newly identified species are added each
year.
• Estimates of the total diversity of life range from
about 10 million to over 100 million species.
1. Diversity and unity are the dual faces of
life on Earth
• Biological diversity is something to relish and
preserve, but it can also be a bit overwhelming.
Fig. 1.9
• In the face of this
complexity, humans are
inclined to categorize
diverse items into a smaller
number of groups.
• Taxonomy is the branch of
biology that names and
classifies species into a
hierarchical order.
• Domains, followed by
kingdoms, are the broadest
units of classification
Fig. 1.10
Fig. 1-14
Species Genus Family Order Class Phylum Kingdom Domain
Ursus americanus
(American black bear)
Ursus
Ursidae
Carnivora
Mammalia
Chordata
Animalia
Eukarya
• Biologist use a binomial system for naming
and classifying organisms
• Scientific names include a genus name and a
species name
• Carolus Linnaeus developed the system of
classification used today
• Binomial nomenclature describes the genus and
species of the organism
The Three Domains of Life
• The three-domain system is currently used, and
replaces the old five-kingdom system
• Domain Bacteria and domain Archaea comprise
the prokaryotes
• Domain Eukarya includes all eukaryotic
organisms
• The domain Eukarya includes three multicellular
kingdoms:
• Plantae
• Fungi
• Animalia
• Other eukaryotic organisms were formerly
grouped into a kingdom called Protista, though
these are now often grouped into many separate
kingdoms
(a) DOMAIN BACTERIA
(b) DOMAIN ARCHAEA
(c) DOMAIN EUKARYA
Protists
Kingdom Fungi
Kingdom
Plantae
Kingdom Animalia
• Both Eubacteria and Archaea have prokaryotes.
• Archaea may be more closely related to eukaryotes
than they are to bacteria.
• The Eukarya
includes at
least four
kingdoms:
Protista,
Plantae,
Fungi, and
Animalia.
Fig. 1.11
• Six-kingdom system
• Kingdom Eubacteria consists of bacteria
• Kingdom Archaea consists of a unique group of
prokaryotic organisms, which biologists recently
have split off from the bacterial kingdom
(Eubacteria)
• Kingdom Protista consists of protozoans and algae
• Kingdom Fungi consists of the mushrooms, molds,
and yeasts
• Kingdom Plantae consists of plants
• Kingdom Animalia consists of the animals
• The Plantae, Fungi, and Animalia are primarily
multicellular.
• Protista is primarily unicellular but includes the
multicellular algae in many classification schemes.
• Most plants produce their own sugars and food by
photosynthesis.
• Most fungi are decomposers that break down dead
organisms and organic wastes.
• Animals obtain food by ingesting other organisms.
• Underlying the diversity
of life is a striking unity,
especially at the lower
levels of organization.
• The universal genetic
language of DNA unites
prokaryotes, like
bacteria, with
eukaryotes, like humans.
• Among eukaryotes,
unity is evident in many
details of cell structure.
Fig. 1.12
• Above the cellular level, organisms are variously
adapted to their ways of life.
• This creates challenges in the ongoing task of
describing and classifying biological diversity.
• Evolution accounts for this combination of unity
and diversity of life.
• The history of life is a saga of a restless Earth
billions of years old, inhabited by a changing cast
of living forms.
2. Evolution is the core theme of biology
• This cast is revealed
through fossils and other
evidence.
• Life evolves.
• Each species is one twig
on a branching tree of life
extending back through
ancestral species.
Fig. 1.13
• Species that are very similar share a common
ancestor that represents a relatively recent branch
point on the tree of life.
• Brown bears and polar bears share a recent common
ancestor.
• Both bears are also related through older common
ancestors to other organisms.
• The presence of hair and milk-producing mammary
glands indicates that bears are related to other
mammals.
• Similarities in cellular structure, like cilia, indicate
a common ancestor for all eukaryotes.
• All life is connected through evolution.
• Charles Darwin published On the Origin of
Species by Means of Natural Selection in 1859
• Darwin made two main points:
• Species showed evidence of “descent with
modification” from common ancestors
• Natural selection is the mechanism behind “descent
with modification”
• Darwin’s theory explained the duality of unity
and diversity
• Darwin observed that:
• Individuals in a population have traits that vary
• Many of these traits are heritable (passed from parents
to offspring)
• More offspring are produced than survive
• Competition is inevitable
• Species generally suit their environment
• Darwin inferred that:
• Individuals that are best suited to their environment are
more likely to survive and reproduce
• Over time, more individuals in a population will have
the advantageous traits
• In other words, the natural environment “selects”
for beneficial traits
Population
with varied
inherited traits
1
Elimination
of individuals
with certain
traits.
Reproduction
of survivors.
Increasing
frequency
of traits that
enhance
survival and
reproductive
success.
• Natural selection is often evident in adaptations of
organisms to their way of life and environment
• Bat wings are an example of adaptation
The Tree of Life
• “Unity in diversity” arises from “descent with
modification”
• For example, the forelimb of the bat, human, horse and
the whale flipper all share a common skeletal
architecture
• Fossils provide additional evidence of anatomical
unity from descent with modification
• Darwin proposed that natural selection could
cause an ancestral species to give rise to two or
more descendent species
• For example, the finch species of the Galápagos
Islands
• Evolutionary relationships are often illustrated
with tree-like diagrams that show ancestors and
their descendents
COMMON
ANCESTOR
Warblerfinches
Insect-eaters
Bud-eater
Seed-eater
Insect-eaters
TreefinchesGroundfinches
Seed-eaters
Cactus-flower-
eaters
Green warbler finch
Certhidea olivacea
Gray warbler finch
Certhidea fusca
Sharp-beaked
ground finch
Geospiza difficilis
Vegetarian finch
Platyspiza crassirostris
Mangrove finch
Cactospiza heliobates
Woodpecker finch
Cactospiza pallida
Medium tree finch
Camarhynchus pauper
Large tree finch
Camarhynchus psittacula
Small tree finch
Camarhynchus parvulus
Large cactus
ground finch
Geospiza conirostris
Cactus ground finch
Geospiza scandens
Small ground finch
Geospiza fuliginosa
Medium ground finch
Geospiza fortis
Large ground finch
Geospiza magnirostris
Warblerfinches
Insect-eaters
Seed-eater
Bud-eater
Green warbler finch
Certhidea olivacea
Gray warbler finch
Certhidea fusca
Sharp-beaked
ground finch
Geospiza difficilis
Vegetarian finch
Platyspiza crassirostris
Mangrove finch
Cactospiza heliobates
Woodpecker finch
Cactospiza pallida
Medium tree finch
Camarhynchus pauper
Large tree finch
Camarhynchus psittacula
Small tree finch
Camarhynchus parvulus
Treefinches
Insect-eaters
Large cactus
ground finch
Geospiza conirostris
Cactus ground finch
Geospiza scandens
Small ground finch
Geospiza fuliginosa
Medium ground finch
Geospiza fortis
Large ground finch
Geospiza magnirostris
Cactus-flower-
eaters
Seed-eaters
Groundfinches
• Population evolve as a result of selective pressures
from changes in the environment
• Descent with modification accounts for both the
unity and diversity of life.
• In many cases, features shared by two species are due to
their descent from a common ancestor.
• Differences are due to modifications by natural
selection modifying the ancestral equipment in different
environments.
• Evolution is the core theme of biology - a unifying
thread that ties biology together.

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Chapter 1

  • 2. • Biology, the study of life and living things (organisms) • Biology is the scientific extension of the human tendency to connect to and be curious about life. • The adventure of biology takes us: • Into a variety of environments to investigate ecosystems • To the laboratory to examine how organisms work • Into the microscopic world to explore cells and the submicroscopic to explore molecules in cells • Back in time to investigate the history of life. 1.1 What is biology?
  • 3. • In some ways, biology is the most demanding of all sciences, partly because living systems are so complex and partly because biology is an multidisciplinary science that requires a knowledge of chemistry, physics, and mathematics. • Biology is also the science most connected to the humanities and social sciences. • The complexity of life is inspiring, but it can be overwhelming. • Ten themes cut across all biological fields.
  • 4. 1.2 Branches in biology Zoology – the study of animals Botany – the study of plants Microbiology – the study of microorganisms Mycology – the study of fungi Bacteriology – the study of bacteria Anatomy – study the structure of animals and plants Taxonomy – classification of organisms
  • 5. • Histology - ? • Embryology - ? • Physiology - ? • Development biology - ? • Biochemistry - ? • Cell biology - ? • Genetics - ? • Molecular biology , ecology - ?
  • 6. 1.3 Brief history of life • Life can be defined in terms of the characteristics of living organisms 1. Organisms are composed of cells  Unicellular organisms are composed of a single cell.  Multicellular organisms are composed of several or great numbers of cells  The cell theory was first described by Schleidan and Schwann in the 1800s. 1. Living organisms grow and develop  Growth may result from an increase in the number of cells or in individual cell size
  • 7.  Development is the process of change during the life span of the organism 3. Metabolism includes the chemical processes essential to growth, repair, and reproduction  The relatively constant internal environment is known as homeostasis 4. Movement is a basic property of cells  Movement may result from amoeboid motion, cilia or flagella  Muscular systems allow movement  Some organisms are sessile
  • 8. 5. Organisms respond to stimuli  Responses of animals are more obvious  Plants respond to light, gravity, water, touch, and other stimuli 6. Organisms reproduce  Life comes from life  Asexual reproduction does not include gamete fusion  Most plants and animals reproduce sexually 7. Populations evolve and become adapted to the environment  Adaptations may be structural, physiological, and/or behavioral
  • 10. • Biology can be viewed as having two dimensions: a “vertical” dimension covering the size scale from atoms to the biosphere and a “horizontal” dimension that stretches across the diversity of life. • The latter includes not only present day organisms but those throughout life’s history. • Evolution makes sense of everything we know about living organisms • Organisms living on Earth are modified descendents of common ancestors The sign of evolution
  • 11. • Evolution is the key to understanding biological diversity. • The evolutionary connections among all organisms explain the unity and diversity of life.
  • 12. • Diversity is a hallmark of life. • At present, biologists have identified and named about 1.8 million species. • This includes over 280,000 plants, almost 50,000 vertebrates, and over 750,000 insects. • Thousands of newly identified species are added each year. • Estimates of the total diversity of life range from about 10 million to over 100 million species. 1. Diversity and unity are the dual faces of life on Earth
  • 13. • Biological diversity is something to relish and preserve, but it can also be a bit overwhelming. Fig. 1.9
  • 14. • In the face of this complexity, humans are inclined to categorize diverse items into a smaller number of groups. • Taxonomy is the branch of biology that names and classifies species into a hierarchical order. • Domains, followed by kingdoms, are the broadest units of classification Fig. 1.10
  • 15. Fig. 1-14 Species Genus Family Order Class Phylum Kingdom Domain Ursus americanus (American black bear) Ursus Ursidae Carnivora Mammalia Chordata Animalia Eukarya
  • 16. • Biologist use a binomial system for naming and classifying organisms • Scientific names include a genus name and a species name • Carolus Linnaeus developed the system of classification used today • Binomial nomenclature describes the genus and species of the organism
  • 17. The Three Domains of Life • The three-domain system is currently used, and replaces the old five-kingdom system • Domain Bacteria and domain Archaea comprise the prokaryotes • Domain Eukarya includes all eukaryotic organisms
  • 18. • The domain Eukarya includes three multicellular kingdoms: • Plantae • Fungi • Animalia • Other eukaryotic organisms were formerly grouped into a kingdom called Protista, though these are now often grouped into many separate kingdoms
  • 19. (a) DOMAIN BACTERIA (b) DOMAIN ARCHAEA (c) DOMAIN EUKARYA Protists Kingdom Fungi Kingdom Plantae Kingdom Animalia
  • 20. • Both Eubacteria and Archaea have prokaryotes. • Archaea may be more closely related to eukaryotes than they are to bacteria. • The Eukarya includes at least four kingdoms: Protista, Plantae, Fungi, and Animalia. Fig. 1.11
  • 21. • Six-kingdom system • Kingdom Eubacteria consists of bacteria • Kingdom Archaea consists of a unique group of prokaryotic organisms, which biologists recently have split off from the bacterial kingdom (Eubacteria) • Kingdom Protista consists of protozoans and algae • Kingdom Fungi consists of the mushrooms, molds, and yeasts • Kingdom Plantae consists of plants • Kingdom Animalia consists of the animals
  • 22. • The Plantae, Fungi, and Animalia are primarily multicellular. • Protista is primarily unicellular but includes the multicellular algae in many classification schemes. • Most plants produce their own sugars and food by photosynthesis. • Most fungi are decomposers that break down dead organisms and organic wastes. • Animals obtain food by ingesting other organisms.
  • 23. • Underlying the diversity of life is a striking unity, especially at the lower levels of organization. • The universal genetic language of DNA unites prokaryotes, like bacteria, with eukaryotes, like humans. • Among eukaryotes, unity is evident in many details of cell structure. Fig. 1.12
  • 24. • Above the cellular level, organisms are variously adapted to their ways of life. • This creates challenges in the ongoing task of describing and classifying biological diversity. • Evolution accounts for this combination of unity and diversity of life.
  • 25. • The history of life is a saga of a restless Earth billions of years old, inhabited by a changing cast of living forms. 2. Evolution is the core theme of biology • This cast is revealed through fossils and other evidence. • Life evolves. • Each species is one twig on a branching tree of life extending back through ancestral species. Fig. 1.13
  • 26. • Species that are very similar share a common ancestor that represents a relatively recent branch point on the tree of life. • Brown bears and polar bears share a recent common ancestor. • Both bears are also related through older common ancestors to other organisms. • The presence of hair and milk-producing mammary glands indicates that bears are related to other mammals. • Similarities in cellular structure, like cilia, indicate a common ancestor for all eukaryotes. • All life is connected through evolution.
  • 27. • Charles Darwin published On the Origin of Species by Means of Natural Selection in 1859 • Darwin made two main points: • Species showed evidence of “descent with modification” from common ancestors • Natural selection is the mechanism behind “descent with modification” • Darwin’s theory explained the duality of unity and diversity
  • 28. • Darwin observed that: • Individuals in a population have traits that vary • Many of these traits are heritable (passed from parents to offspring) • More offspring are produced than survive • Competition is inevitable • Species generally suit their environment
  • 29. • Darwin inferred that: • Individuals that are best suited to their environment are more likely to survive and reproduce • Over time, more individuals in a population will have the advantageous traits • In other words, the natural environment “selects” for beneficial traits
  • 30. Population with varied inherited traits 1 Elimination of individuals with certain traits. Reproduction of survivors. Increasing frequency of traits that enhance survival and reproductive success.
  • 31. • Natural selection is often evident in adaptations of organisms to their way of life and environment • Bat wings are an example of adaptation
  • 32.
  • 33. The Tree of Life • “Unity in diversity” arises from “descent with modification” • For example, the forelimb of the bat, human, horse and the whale flipper all share a common skeletal architecture • Fossils provide additional evidence of anatomical unity from descent with modification
  • 34. • Darwin proposed that natural selection could cause an ancestral species to give rise to two or more descendent species • For example, the finch species of the Galápagos Islands • Evolutionary relationships are often illustrated with tree-like diagrams that show ancestors and their descendents
  • 35. COMMON ANCESTOR Warblerfinches Insect-eaters Bud-eater Seed-eater Insect-eaters TreefinchesGroundfinches Seed-eaters Cactus-flower- eaters Green warbler finch Certhidea olivacea Gray warbler finch Certhidea fusca Sharp-beaked ground finch Geospiza difficilis Vegetarian finch Platyspiza crassirostris Mangrove finch Cactospiza heliobates Woodpecker finch Cactospiza pallida Medium tree finch Camarhynchus pauper Large tree finch Camarhynchus psittacula Small tree finch Camarhynchus parvulus Large cactus ground finch Geospiza conirostris Cactus ground finch Geospiza scandens Small ground finch Geospiza fuliginosa Medium ground finch Geospiza fortis Large ground finch Geospiza magnirostris
  • 36. Warblerfinches Insect-eaters Seed-eater Bud-eater Green warbler finch Certhidea olivacea Gray warbler finch Certhidea fusca Sharp-beaked ground finch Geospiza difficilis Vegetarian finch Platyspiza crassirostris
  • 37. Mangrove finch Cactospiza heliobates Woodpecker finch Cactospiza pallida Medium tree finch Camarhynchus pauper Large tree finch Camarhynchus psittacula Small tree finch Camarhynchus parvulus Treefinches Insect-eaters
  • 38. Large cactus ground finch Geospiza conirostris Cactus ground finch Geospiza scandens Small ground finch Geospiza fuliginosa Medium ground finch Geospiza fortis Large ground finch Geospiza magnirostris Cactus-flower- eaters Seed-eaters Groundfinches
  • 39. • Population evolve as a result of selective pressures from changes in the environment • Descent with modification accounts for both the unity and diversity of life. • In many cases, features shared by two species are due to their descent from a common ancestor. • Differences are due to modifications by natural selection modifying the ancestral equipment in different environments. • Evolution is the core theme of biology - a unifying thread that ties biology together.

Editor's Notes

  1. Figure 1.14 Classifying life