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LifeDesk: Managing and Sharing
Biodiversity Research on the Web



 Torsten Dikow

 Biodiversity Synthesis Center
 Field Museum of Natural History, Chicago, IL, USA
“The Encyclopedia of Life is an ecosystem of websites that makes all key
information about all life on Earth accessible to anyone, anywhere in the
world” (www.eol.org)


            www.eol.org                         blog.eol.org
Encyclopedia of Life – EOL
    ◊ 1.8 Million species pages
    ◊ A web-site for every species that roams or roamed the earth
    ◊ Freely available – Customizable by user – Common portal




general layout of an
           EOL page
Biodiversity Heritage Library – BHL   www.biodiversitylibrary.org




main page
      BHL
Support provided by EOL – Biodiversity Synthesis Center
 ◊ Funding for meetings and workshops on diverse topics

 ◊ next deadlines 1 July 2010, 1 November 2010            synthesis.eol.org
                                                             BioSynC main page
LifeDesk             www.lifedesks.org




LifeDesk main page
Drupal – open source content management platform

 Use of Drupal:
 BBC
 White House.gov
 CNN
 NASA
 NATO
 Greenpeace
 United Nations
 FedEx
 major newspapers
 ...
Drupal – also being used by Scratchpads

                   www.scratchpads.eu
LifeDesk – Public Access – leptogastrinae.lifedesks.org
LifeDesk –
Scientist
Access
LifeDesk – My Account & Site Settings




 • update your personal account    • change color scheme
                                   • change logo
LifeDesk – Site Settings
                 Customization
                 ◊ botanical and zoological nomenclatorial differences
                 ◊ user selects taxonomic ranks to be used
                 ◊ taxonomic relationships
                   • synonymy
                   • availability
                   • incorrect spelling
LifeDesk – Classification editor
LifeDesk – Classification editor
LifeDesk – Creating Content
LifeDesk – Image Import
LifeDesk – Taxon Pages




 show ...
                               Chapter definitions follow TDWG
 ◊ text entered here           standard

 ◊ images from gallery
 ◊ taxonomy / classification
 ◊ references / bibliography
LifeDesk – Bibliography




 or import
 ◊ BibTex
 ◊ EndNote
 ◊ RIS
 ◊ MARC
LifeDesk – EOL Partnership




                             EOL species page
Species page in LifeDesk
        http://leptogastrinae.lifedesks.org/pages/1797


Species page on EOL
        http://www.eol.org/pages/770905
LifeDesk – Use of ...
 ◊ LifeDesk = best way to upload species information to EOL
   Your participation is needed to improve EOL !


 ◊ LifeDesk = infrastructure for collaboration online


 ◊ LifeDesk = great outreach component for NSF applications


 ◊ LifeDesk modules available for download (http://www.lifedesks.org/modules)
   • develop your own Drupal web presence
   • still provide content to the EOL


 ◊ functionality improved regularly     (http://www.lifedesks.org/newfeatures)

   • bulk upload of text or images


 ◊ http://synthesis.eol.org/users/tdikow
Thank You ...
 ◊ LifeDesk developer David Shorthouse


 ◊ Encyclopedia of Life funding sources & BioSynC


 ◊ NSF REVSYS (DEB-0919333)

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TDikow Lifedesk Presentation May 2010

  • 1. LifeDesk: Managing and Sharing Biodiversity Research on the Web Torsten Dikow Biodiversity Synthesis Center Field Museum of Natural History, Chicago, IL, USA
  • 2. “The Encyclopedia of Life is an ecosystem of websites that makes all key information about all life on Earth accessible to anyone, anywhere in the world” (www.eol.org) www.eol.org blog.eol.org
  • 3. Encyclopedia of Life – EOL ◊ 1.8 Million species pages ◊ A web-site for every species that roams or roamed the earth ◊ Freely available – Customizable by user – Common portal general layout of an EOL page
  • 4. Biodiversity Heritage Library – BHL www.biodiversitylibrary.org main page BHL
  • 5. Support provided by EOL – Biodiversity Synthesis Center ◊ Funding for meetings and workshops on diverse topics ◊ next deadlines 1 July 2010, 1 November 2010 synthesis.eol.org BioSynC main page
  • 6. LifeDesk www.lifedesks.org LifeDesk main page
  • 7. Drupal – open source content management platform Use of Drupal: BBC White House.gov CNN NASA NATO Greenpeace United Nations FedEx major newspapers ...
  • 8. Drupal – also being used by Scratchpads www.scratchpads.eu
  • 9. LifeDesk – Public Access – leptogastrinae.lifedesks.org
  • 11. LifeDesk – My Account & Site Settings • update your personal account • change color scheme • change logo
  • 12. LifeDesk – Site Settings Customization ◊ botanical and zoological nomenclatorial differences ◊ user selects taxonomic ranks to be used ◊ taxonomic relationships • synonymy • availability • incorrect spelling
  • 17. LifeDesk – Taxon Pages show ... Chapter definitions follow TDWG ◊ text entered here standard ◊ images from gallery ◊ taxonomy / classification ◊ references / bibliography
  • 18. LifeDesk – Bibliography or import ◊ BibTex ◊ EndNote ◊ RIS ◊ MARC
  • 19. LifeDesk – EOL Partnership EOL species page
  • 20. Species page in LifeDesk http://leptogastrinae.lifedesks.org/pages/1797 Species page on EOL http://www.eol.org/pages/770905
  • 21. LifeDesk – Use of ... ◊ LifeDesk = best way to upload species information to EOL Your participation is needed to improve EOL ! ◊ LifeDesk = infrastructure for collaboration online ◊ LifeDesk = great outreach component for NSF applications ◊ LifeDesk modules available for download (http://www.lifedesks.org/modules) • develop your own Drupal web presence • still provide content to the EOL ◊ functionality improved regularly (http://www.lifedesks.org/newfeatures) • bulk upload of text or images ◊ http://synthesis.eol.org/users/tdikow
  • 22. Thank You ... ◊ LifeDesk developer David Shorthouse ◊ Encyclopedia of Life funding sources & BioSynC ◊ NSF REVSYS (DEB-0919333)