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CASE STUDY: SLAC NATIONAL ACCELERATOR LABORATORY
Samsung Solid State Drives Speed Scientific Discovery
OVERVIEW
Customer Need
SLAC National Accelerator Laboratory wanted
to maximize the use of its powerful Linac
Coherent Light Source (LCLS) – an X-ray laser
that creates stop-motion images of atoms
and molecules in action, resulting in greater
understanding of fundamental processes, like
photosynthesis. SLAC wanted to increase the
rate at which the system could acquire data,
so more scientists could make greater use of
the technology.
Samsung Solution
SLAC implemented Samsung Solid State Drive
(SSD) technology to store and retrieve the
data from its online cache. Unlike traditional
Hard Disk Drive (HDD) technology, the
Samsung 256GB 2.5-inch SSD 840 Pro Series
does not use any mechanical parts, such as
motor-driven spindles. Instead, the data are
stored in the form of electrons within the
arrays of tiny transistors in a chip, allowing the
technology to operate at much faster speeds.
Results
The Samsung SSD technology allows the
SLAC X-ray laser to acquire data at up to 8
gigabytes per second of data, compared to
just 2 gigabytes per second before. In the
short-term, this increased productivity will
allow more experiments to be conducted,
while allaying concerns of information being
lost because of the slow read-write process
of HDD. In addition, the greater capacity will
allow SLAC to introduce larger detectors and
other technologies to improve the quality and
granularity of the images.
2
THECUSTOMER
SLACNational
AcceleratorLaboratory
SLACNationalAccelerator
Laboratory,whichisoperatedby
StanfordUniversityonbehalfofthe
U.S.DepartmentofEnergy,hasspent
thelasthalf-centuryontheforefront
oftechnologicalinnovation.
SinceSLACopenedin1962,six
scientistshavereceivedNobel
Prizesforworkdoneatthelab,and
morethan1,000scientificpapers
arepublishedannuallybasedon
researchthatisconductedthere.
SLACcreatedthefirstwebsitein
NorthAmerica,builttheworld’s
largestparticleaccelerator,andhas
discoveredsomeofthefundamental
buildingblocksofmatter.
Thefacilityisspreadacross151
buildingson426acresinMenlo
Park,intherenownedSiliconValley.
Thelabhassome1,700full-time
employees,3,400facilityuserseach
year,and124graduatestudents
whoareconductingworkinparticle
physicsandotheradvanced
scientificrealms.
Scientistsfromaroundtheworld
cometouseSLAC’scutting-edge
technology,includingSLAC’s
revolutionaryX-raylaser,which
providesremarkableinsightinto
theintimatedetailsofatomsand
chemicalreactions.Thelaser,which
shootsabeamnarrowerthana
humanhair,isthelatestofthe
landmarktechnologythathasbeen
implementedatSLAC.
Thesewell-knownresearchers,
alongwiththelab’sownstaff
scientists,havediscoverednew
drugsforhealing,newmaterials
forelectronics,andnewwaysto
producecleanenergy.SLACregularly
makesheadlinesaroundtheworld
forthescientificmysteriesitunlocks,
suchassolvinga150-million-year-
oldriddleaboutthe“dinobird”—
famousfossilsthatlinkdinosaurs
andbirds.
SLAC is home to the linear accelerator (or
linac), a two-mile-long structure that is
buried 30 feet below the ground. Called
“the world’s straightest object,” the linac
greatly increases the velocity of charged
subatomic particles so they can be used
for cutting-edge physics experiments. In
April 2009, the linac was applied to a new
kind of laser called the Linac Coherent
Light Source (LCLS).
The LCLS creates powerful X-ray pulses,
each of which are millions of times
brighter than medical X-rays. These
pulses are analogous to flashes of an
extremely fast stroke light. Scientists
use the pulses to take stop-motion
pictures of atoms and molecules in
action. The technology allows a “shutter
speed” of less than 1/10th of a trillionth
of a second. These images can provide
insight about fundamental processes,
like photosynthesis, that was not possible
before.
LCLS acquires, on average, 100 terabytes
of data per week. An experiment at one of
the LCLS instruments produces about
10 million X-ray images over the course of
24 hours. LCLS currently manages about
10 petabytes of data.
In the LCLS data acquisition system, the
contributions from the various detectors
are sent via multicast packets to a set of
nodes with local storage. These nodes,
which constitute the so-called online
cache, assemble the data into events
(one event corresponds to one pulse of
the LCLS X-ray beam) and write the event
to disk. The events are distributed across
the online cache nodes in a round-robin
fashion in order to provide scalability.
The event data are then transferred to
another storage layer where the users
can access the data for extracting the
science for their experiment. These
concurrent read operations can create
intervals during which write operations
are stalling, causing the buffers to fill up
and generating drops in the network
traffic. By replacing the HDDs with SSDs,
the LCLS data acquisition was able to
eliminate these concurrency effects and,
consequently, to increase its throughput
by a factor of four.
THE CUSTOMER NEED
Fast, Reliable Storage for Data Acquisition
To improve the efficiency of the online
cache, SLAC implemented Samsung
Solid State Drive (SSD) technology. The
LCLS system uses 100 256GB 2.5-inch
SSD 840 Pro.
SSDs store and retrieve information
in a fundamentally different way than
traditional HDD. HDDs read and write data
using motor-driven spindles, actuator
arms, and other mechanical parts that
place a recording head over rapidly
spinning magnetic-coated disks.
In contrast, SSDs have no moving parts,
instead storing information in the form
of electrons within the arrays of tiny
transistors in a chip. Because SSDs do
not require mechanical movements, the
technology accesses stored information
in microseconds, up to 100 times faster
than even the speediest HDD.
“SSD is normally used by people
who need a lot of I/O (input/output)
operations,” says Amedeo Perazzo, who
leads the Photon Controls and Data
Systems Department at SLAC. Larger-
capacity SSDs tend to have more I/O
channels working in parallel, which allows
them to handle a bigger stream of data,
and thus perform more work faster.
“That isn’t the reason we use SSDs,
though,” Perazzo said. “For us, the
SDD acts as a buffer between the data
acquisition system and the user system.
Solid state technology was the best way
to separate the read operations from the
write operations.”
He notes that the use of HDD mechanical
spindles for the online cache, caused the
read operations to slow down the write
operations badly enough to lose some
of the multicast packets, a technique for
one-to-many communication over an IP
infrastructure in a network. “The standard
spindles weren’t fast enough to give the
writers access to the disk,” Perazzo said.
SSDs have other advantages in addition
to speed: They operate silently, since they
have no moving parts. They consume
about half as much power as HDD. And
they can store just as much information.
The amount of data the SDD stores
depends on the number of flash memory
chips it has. Although a chip is only the
size of a postage stamp, it can hold a huge
amount of information—approximately
300,000 pages of Microsoft Word
documents, 5,000 photos, 1,000 MP3
music files, or a dozen movies.
QUICK PROFILE
As used by SLAC National
Accelerator Laboratory
SAMSUNG 840 PRO SERIES
SOLID STATE DRIVES
Form Factor: 2.5-inch
Capacity: Available in 128GB,
256GB & 512GB
Host Interface: Serial ATA
interface of 6.0Gbps; compliant
with ATA/ATAPI-8 Standard
Sequential Read Speed: Up to
540MB/s for 256GB & 512GB
models; up to 530MB/s for
128GB model
Sequential Write Speed: Up
to 520MB/s for 256GB & 512GB
models; up to 390MB/s for
128GB model
Random Read Speed: Up to
100K IOPS for 256GB & 512GB
models; up to 97K IOPS for
128GB model
Random Write Speed: Up to
90K IOPS
Power Consumption: 0.15W
Encryption: AES 256-bit Full
Disk Encryption; Class0 Self
Encryption Drive; user can set
HDD password in BIOS setup
mode
Operating Systems: Windows
Vista or Later
Environmental Specs:
Operating Temperature of 32o
F
to 140o
F
Weight: 0.15lb
Warranty: 5 years
THE SAMSUNG SOLUTION
SSDs Provide Read/Write Buffer
3
“We were able to go
from 2 gigabytes per
second to 8 gigabytes
per second...which
means we can
make better use
of machine time,”
– Amedeo Perazzo,
SLAC National
Accelerator Laboratory
© 2013 Samsung Electronics America, Inc. All rights reserved. Samsung is a registered trademark of Samsung Electronics Co., Ltd. All products,
logos and brand names are trademarks or registered trademarks of their respective companies. Screen images simulated. This case study is for
informationalpurposesonly. Samsungmakesnowarranties, express orimplied, in this case study.
Learn more 1-866-SAM4BIZ | samsung.com/business | @SamsungBizUSA
THE RESULTS
Eliminate Data Loss and Maximize “Beam Time”
The Samsung SSD technology
dramatically increased the rate at which
SLAC’s LCLS system could process data,
accommodating the demands of cutting
edge scientific research that attempts
to understand things as complicated
as dark matter and the origins of the
universe itself.
“We were able to go from 2 gigabytes
per second to 8 gigabytes per second
without the need to add new nodes
and without introducing dead time in
the system or losing multicast packets,
which means we can make better use of
machine time,” Perazzo said. “The cost
of operating the machine is the same,
so if you can triple or quadruple the rate,
you get a proportional increase
in productivity.”
With spindles, the read operations in
the online cache slowed down enough
that the experimenters were afraid
they might lose some of the multicast
packets used by the data acquisition
system to move the science data from
the instruments to the online cache.
“The data that we collect are extremely
valuable and very expensive,” he said.
“Our goal is to have a lossless network.”
Since data can be acquired faster,
more institutions will be able to use the
facilities, allowing for more ground-
breaking scientific experiments. “Users
are hungry to access the data,” he said.
“The time on the LCLS is precious.”
The LCLS experiments depend on speed;
scientists need to review the data in real
time so they can adjust the parameters
of their experiments, allowing them to
get maximum benefit from scarce
“beam time.”
In particle physics, scientists attempt to
immediately and aggressively filter out
the data so they can single out particular,
and rare, types of events they want to
focus on. In LCLS, though, all events
may contain, in principle, essential
scientific information.
LCLS stores data at a rate and scale
comparable to experiments at the
world’s most powerful particle collider,
the Large Hadron Collider in Switzerland.
Implementing the faster SSD cache
was also necessary to accommodate
the many advances that the lab plans,
such as larger, more sensitive detectors,
more complex experiments, multiple
simultaneous experiments, and a
possible increase in the beam pulse rate.
“With the HDD system, we weren’t able
to scale as well,” Perazzo said. “We know
bigger detectors are coming, which will
allow images with a finer granularity.
The result is higher resolution in the
processed data which can give us, for
example, a better understanding of how
certain processes happen in nature.”
In an era of Big Data, SLAC’s X-ray laser
has emerged as a prototypical example
of how to handle massive amounts of
information, and the SSD system will
help usher in the lab’s next era of great
scientific discovery.
“In the near future we will be taking a
factor of 20 times more data than we are
taking today,” Perazzo said. “Eventually,
we expect to use the SSD technology in
our offline systems as well, so that the
analysis of the data will be able to keep
up with the data acquisition rates.”

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Samsung SSDs Speed Scientific Discovery

  • 1. CASE STUDY: SLAC NATIONAL ACCELERATOR LABORATORY Samsung Solid State Drives Speed Scientific Discovery OVERVIEW Customer Need SLAC National Accelerator Laboratory wanted to maximize the use of its powerful Linac Coherent Light Source (LCLS) – an X-ray laser that creates stop-motion images of atoms and molecules in action, resulting in greater understanding of fundamental processes, like photosynthesis. SLAC wanted to increase the rate at which the system could acquire data, so more scientists could make greater use of the technology. Samsung Solution SLAC implemented Samsung Solid State Drive (SSD) technology to store and retrieve the data from its online cache. Unlike traditional Hard Disk Drive (HDD) technology, the Samsung 256GB 2.5-inch SSD 840 Pro Series does not use any mechanical parts, such as motor-driven spindles. Instead, the data are stored in the form of electrons within the arrays of tiny transistors in a chip, allowing the technology to operate at much faster speeds. Results The Samsung SSD technology allows the SLAC X-ray laser to acquire data at up to 8 gigabytes per second of data, compared to just 2 gigabytes per second before. In the short-term, this increased productivity will allow more experiments to be conducted, while allaying concerns of information being lost because of the slow read-write process of HDD. In addition, the greater capacity will allow SLAC to introduce larger detectors and other technologies to improve the quality and granularity of the images.
  • 2. 2 THECUSTOMER SLACNational AcceleratorLaboratory SLACNationalAccelerator Laboratory,whichisoperatedby StanfordUniversityonbehalfofthe U.S.DepartmentofEnergy,hasspent thelasthalf-centuryontheforefront oftechnologicalinnovation. SinceSLACopenedin1962,six scientistshavereceivedNobel Prizesforworkdoneatthelab,and morethan1,000scientificpapers arepublishedannuallybasedon researchthatisconductedthere. SLACcreatedthefirstwebsitein NorthAmerica,builttheworld’s largestparticleaccelerator,andhas discoveredsomeofthefundamental buildingblocksofmatter. Thefacilityisspreadacross151 buildingson426acresinMenlo Park,intherenownedSiliconValley. Thelabhassome1,700full-time employees,3,400facilityuserseach year,and124graduatestudents whoareconductingworkinparticle physicsandotheradvanced scientificrealms. Scientistsfromaroundtheworld cometouseSLAC’scutting-edge technology,includingSLAC’s revolutionaryX-raylaser,which providesremarkableinsightinto theintimatedetailsofatomsand chemicalreactions.Thelaser,which shootsabeamnarrowerthana humanhair,isthelatestofthe landmarktechnologythathasbeen implementedatSLAC. Thesewell-knownresearchers, alongwiththelab’sownstaff scientists,havediscoverednew drugsforhealing,newmaterials forelectronics,andnewwaysto producecleanenergy.SLACregularly makesheadlinesaroundtheworld forthescientificmysteriesitunlocks, suchassolvinga150-million-year- oldriddleaboutthe“dinobird”— famousfossilsthatlinkdinosaurs andbirds. SLAC is home to the linear accelerator (or linac), a two-mile-long structure that is buried 30 feet below the ground. Called “the world’s straightest object,” the linac greatly increases the velocity of charged subatomic particles so they can be used for cutting-edge physics experiments. In April 2009, the linac was applied to a new kind of laser called the Linac Coherent Light Source (LCLS). The LCLS creates powerful X-ray pulses, each of which are millions of times brighter than medical X-rays. These pulses are analogous to flashes of an extremely fast stroke light. Scientists use the pulses to take stop-motion pictures of atoms and molecules in action. The technology allows a “shutter speed” of less than 1/10th of a trillionth of a second. These images can provide insight about fundamental processes, like photosynthesis, that was not possible before. LCLS acquires, on average, 100 terabytes of data per week. An experiment at one of the LCLS instruments produces about 10 million X-ray images over the course of 24 hours. LCLS currently manages about 10 petabytes of data. In the LCLS data acquisition system, the contributions from the various detectors are sent via multicast packets to a set of nodes with local storage. These nodes, which constitute the so-called online cache, assemble the data into events (one event corresponds to one pulse of the LCLS X-ray beam) and write the event to disk. The events are distributed across the online cache nodes in a round-robin fashion in order to provide scalability. The event data are then transferred to another storage layer where the users can access the data for extracting the science for their experiment. These concurrent read operations can create intervals during which write operations are stalling, causing the buffers to fill up and generating drops in the network traffic. By replacing the HDDs with SSDs, the LCLS data acquisition was able to eliminate these concurrency effects and, consequently, to increase its throughput by a factor of four. THE CUSTOMER NEED Fast, Reliable Storage for Data Acquisition
  • 3. To improve the efficiency of the online cache, SLAC implemented Samsung Solid State Drive (SSD) technology. The LCLS system uses 100 256GB 2.5-inch SSD 840 Pro. SSDs store and retrieve information in a fundamentally different way than traditional HDD. HDDs read and write data using motor-driven spindles, actuator arms, and other mechanical parts that place a recording head over rapidly spinning magnetic-coated disks. In contrast, SSDs have no moving parts, instead storing information in the form of electrons within the arrays of tiny transistors in a chip. Because SSDs do not require mechanical movements, the technology accesses stored information in microseconds, up to 100 times faster than even the speediest HDD. “SSD is normally used by people who need a lot of I/O (input/output) operations,” says Amedeo Perazzo, who leads the Photon Controls and Data Systems Department at SLAC. Larger- capacity SSDs tend to have more I/O channels working in parallel, which allows them to handle a bigger stream of data, and thus perform more work faster. “That isn’t the reason we use SSDs, though,” Perazzo said. “For us, the SDD acts as a buffer between the data acquisition system and the user system. Solid state technology was the best way to separate the read operations from the write operations.” He notes that the use of HDD mechanical spindles for the online cache, caused the read operations to slow down the write operations badly enough to lose some of the multicast packets, a technique for one-to-many communication over an IP infrastructure in a network. “The standard spindles weren’t fast enough to give the writers access to the disk,” Perazzo said. SSDs have other advantages in addition to speed: They operate silently, since they have no moving parts. They consume about half as much power as HDD. And they can store just as much information. The amount of data the SDD stores depends on the number of flash memory chips it has. Although a chip is only the size of a postage stamp, it can hold a huge amount of information—approximately 300,000 pages of Microsoft Word documents, 5,000 photos, 1,000 MP3 music files, or a dozen movies. QUICK PROFILE As used by SLAC National Accelerator Laboratory SAMSUNG 840 PRO SERIES SOLID STATE DRIVES Form Factor: 2.5-inch Capacity: Available in 128GB, 256GB & 512GB Host Interface: Serial ATA interface of 6.0Gbps; compliant with ATA/ATAPI-8 Standard Sequential Read Speed: Up to 540MB/s for 256GB & 512GB models; up to 530MB/s for 128GB model Sequential Write Speed: Up to 520MB/s for 256GB & 512GB models; up to 390MB/s for 128GB model Random Read Speed: Up to 100K IOPS for 256GB & 512GB models; up to 97K IOPS for 128GB model Random Write Speed: Up to 90K IOPS Power Consumption: 0.15W Encryption: AES 256-bit Full Disk Encryption; Class0 Self Encryption Drive; user can set HDD password in BIOS setup mode Operating Systems: Windows Vista or Later Environmental Specs: Operating Temperature of 32o F to 140o F Weight: 0.15lb Warranty: 5 years THE SAMSUNG SOLUTION SSDs Provide Read/Write Buffer 3
  • 4. “We were able to go from 2 gigabytes per second to 8 gigabytes per second...which means we can make better use of machine time,” – Amedeo Perazzo, SLAC National Accelerator Laboratory © 2013 Samsung Electronics America, Inc. All rights reserved. Samsung is a registered trademark of Samsung Electronics Co., Ltd. All products, logos and brand names are trademarks or registered trademarks of their respective companies. Screen images simulated. This case study is for informationalpurposesonly. Samsungmakesnowarranties, express orimplied, in this case study. Learn more 1-866-SAM4BIZ | samsung.com/business | @SamsungBizUSA THE RESULTS Eliminate Data Loss and Maximize “Beam Time” The Samsung SSD technology dramatically increased the rate at which SLAC’s LCLS system could process data, accommodating the demands of cutting edge scientific research that attempts to understand things as complicated as dark matter and the origins of the universe itself. “We were able to go from 2 gigabytes per second to 8 gigabytes per second without the need to add new nodes and without introducing dead time in the system or losing multicast packets, which means we can make better use of machine time,” Perazzo said. “The cost of operating the machine is the same, so if you can triple or quadruple the rate, you get a proportional increase in productivity.” With spindles, the read operations in the online cache slowed down enough that the experimenters were afraid they might lose some of the multicast packets used by the data acquisition system to move the science data from the instruments to the online cache. “The data that we collect are extremely valuable and very expensive,” he said. “Our goal is to have a lossless network.” Since data can be acquired faster, more institutions will be able to use the facilities, allowing for more ground- breaking scientific experiments. “Users are hungry to access the data,” he said. “The time on the LCLS is precious.” The LCLS experiments depend on speed; scientists need to review the data in real time so they can adjust the parameters of their experiments, allowing them to get maximum benefit from scarce “beam time.” In particle physics, scientists attempt to immediately and aggressively filter out the data so they can single out particular, and rare, types of events they want to focus on. In LCLS, though, all events may contain, in principle, essential scientific information. LCLS stores data at a rate and scale comparable to experiments at the world’s most powerful particle collider, the Large Hadron Collider in Switzerland. Implementing the faster SSD cache was also necessary to accommodate the many advances that the lab plans, such as larger, more sensitive detectors, more complex experiments, multiple simultaneous experiments, and a possible increase in the beam pulse rate. “With the HDD system, we weren’t able to scale as well,” Perazzo said. “We know bigger detectors are coming, which will allow images with a finer granularity. The result is higher resolution in the processed data which can give us, for example, a better understanding of how certain processes happen in nature.” In an era of Big Data, SLAC’s X-ray laser has emerged as a prototypical example of how to handle massive amounts of information, and the SSD system will help usher in the lab’s next era of great scientific discovery. “In the near future we will be taking a factor of 20 times more data than we are taking today,” Perazzo said. “Eventually, we expect to use the SSD technology in our offline systems as well, so that the analysis of the data will be able to keep up with the data acquisition rates.”