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“The new era of Downstream Processing:
From a Bottleneck to a Pacemaker”




Platzhalter Bild




BioManufacturing World Oct. 19 2010
Uwe Gottschalk VP Purification Technologies, Sartorius Stedim Biotech
Finally there seems to be a Bottleneck ...




        6th Annual Survey of Biopharmaceutical Manufacturing.
        Eric S. Langer, BioPlan Associates Inc.
Who is facing Limitations?




     “Obviously there is no downstream bottleneck 
                  if you have unlimited cash”
                      – K. John Morrow, Jr., PhD., 2009
Agenda


                                                                            1.Improving throughput –
                                                                            1.Improving throughput –
                                                                              The Capacity Disconnect
                                                                              The Capacity Disconnect

                                                                            2.Process Economy – Cost
                                                                            2.Process Economy – Cost
                                                                              of Goods matter
                                                                              of Goods matter

                                                                            3.Discovering new Shores -
                                                                            3.Discovering new Shores -
                                                                              Fortune favors the Brave
                                                                              Fortune favors the Brave

                                                                            4.Benchmarks of the Future
                                                                            4.Benchmarks of the Future
                                                                              – No best, just better
                                                                              – No best, just better
                                                                            5.The Future of DSP –
                                                                            5.The Future of DSP –
                                                                              Revisiting the Past
                                                                              Revisiting the Past
Data adapted from: F. Wurm Production of recombinant Protein Therapeutics
in Cultivated Mammalian Cells. Nature Biotechnology 22, 1-6 (2004)
Hot Topic: High Titer Processes

      Improving Titres – MAbs (Bulk API)

           Titre Improvements                                                    4 Bioreactors
                                                               800
                  Important cost benefits as
                  titres go beyond 1g/L                        700               Estimate of CoG based on
                  These diminish as we go                      600
                                                                                 standard MAb process for
                  beyond 5g/L                                                    bulk drug substance
                                                               500




                                                   COG ($/g)
                                                               400
           Beyond 5g/L                                         300
                  Downstream cost dominates
                  In this example the plateau                  200

                  is just under $100/g                         100

                                                                0
           Challenge in DSP                                          0   2   4        6      8     10       12

                  Bioreactors decrease in size?                          Titre (g/L)

                  Cope with increased titres
                                                                        2000L        5000L
                  Need to drive out costs
                  Implications for facility
                  design                        Results from Biopharm Services Generic MAb cost model
                                                Bulk API Direct manufacturing costs



   A universal cost model for single use systems in biomanufacturing.
   Andrew Sinclair, BioPharm Services; Berlin Oct. 2007
Agenda


         1.Improving throughput –
         1.Improving throughput –
           The Capacity Disconnect
           The Capacity Disconnect

         2.Process Economy – Cost of
         2.Process Economy – Cost of
           Goods matter
           Goods matter
         3.Discovering new Shores -
         3.Discovering new Shores -
           Fortune favors the Brave
           Fortune favors the Brave

         4. Benchmarks of the Future
         4. Benchmarks of the Future
            – No best, just better
            – No best, just better
         5.The Future of DSP –
         5.The Future of DSP –
           Revisiting the Past
           Revisiting the Past
Challenges of a Modern Downstream Process


  Technical challenge

             Sensitive and technically demanding products require processes with inherent
              complexity and expensive infrastructure

             Need for robust & scalable processes for the entire DSP

             Increasing regulatory scrutiny (Comparability!)

  Financial challenge

             Processes are fixed-cost driven (Investment vs Consumables)

             Manufacturing costs 15 - 25% of sales price

             Costs for DSP up to 75% of manufacturing costs

             Cost Balance Benefit for innovative treatments

             Biosimilars
Typical COG breakdown by

                                         Category




MAb manufacturing: 6 x 2,000L tanks, 2g/L, 90% utilisation; 211 #/a; 527 kg/yr; invest 172 Mio Euro;
142 $/g; Sinclair 2006
Hot Topic: Use of Disposables
J. Zhou BPI Vienna 2008
Agenda


         1.Improving throughput –
         1.Improving throughput –
           The Capacity Disconnect
           The Capacity Disconnect

         2.Process Economy – Cost
         2.Process Economy – Cost
           of Goods matter
           of Goods matter

         3.Discovering new Shores -
         3.Discovering new Shores -
           Fortune favors the Brave
           Fortune favors the Brave

         4.Benchmarks of the Future
         4.Benchmarks of the Future
           – No best, just better
           – No best, just better

         5.The Future of DSP –
         5.The Future of DSP –
           Revisiting the Past
           Revisiting the Past
A Consensus – Value Chain in Bioseparation
                                             High Titer Implications:

                                             Increasing biomass and
                                             contaminant levels

                                             Protein A pool volumes
                                             and step cost

                                             DNA & HCP levels post
                                             Capturing

                                             Polishing load volumes
                                             and conductivity

                                             Pathogen clearance as a
                                             moving target
Downstream Processing 1980




                “If it ain’t broke, don’t fix it”
                             – Bert Lance, 1977
Downstream Processing 2010




               “Le mieux est l’ennemi du bien”
                 (better is the enemy of good)
                                – Voltaire, 1772


                    “没有最好,只有更好”
                     (No best – only better)
                             – Chinese Movie Cliche
Agenda


         1.Improving throughput –
         1.Improving throughput –
           The Capacity Disconnect
           The Capacity Disconnect

         2.Process Economy – Cost
         2.Process Economy – Cost
           of Goods matter
           of Goods matter

         3.Discovering new Shores -
         3.Discovering new Shores -
           Fortune favors the Brave
           Fortune favors the Brave

         4.Benchmarks of the Future
         4.Benchmarks of the Future
           – No best, just better
           – No best, just better
         5.The Future of DSP –
         5.The Future of DSP –
           Revisiting the Past
           Revisiting the Past
Biomass Removal and Early Contaminant Clearance
                                                            addresses:

                                                     Increasing biomass and
                                                     contaminant levels

                                                     DNA & HCP levels post
                                                     Capturing

                                                  • New generation of lenticular
                                                    filtration media

                                                  • No Diatomeaceous Earth;
                                                    Synthetic

                                                  • Cell removal, clarification &
                                                    early on contaminant removal
The Vision of a Disposable Chromatography Process




           Robert van Reis: Future Trends in Bioseparations; Recovery XII, 2006
Process Chromatography: What are the Options?




                                               John Curling and Uwe Gottschalk

                                                BioPharm Intl. October 2007

                            U. Gottschalk. Bioseparation in antibody manufacturing:
                            The good, the bad and the ugly.
                            Biotechnol Prog. 2008 May-Jun;24(3):496-503.
Medarex: Non-Protein A based Purification Processes: Scheme Evolution

                              2 columns +                               1 column +
        3 columns             1 membrane         2 columns              1 membrane
    Unprocessed Bulk     Unprocessed Bulk     Unprocessed Bulk     Unprocessed Bulk


           CEX                CEX                  CEX                  CEX
      Chromatography     Chromatography       Chromatography       Chromatography

    Viral Inactivation   Viral Inactivation   Viral Inactivation   Viral Inactivation

         AEX             AEX Membrane              HCIC             AEX Membrane
    Chromatography       chromatography       Chromatography       Chromatography

       Mixed Mode          Mixed Mode          Viral Filtration     Viral Filtration
     chromatography      chromatography


      Viral Filtration    Viral Filtration

                                                                               Page 26
 Alahari 2009
Two Birds – one Stone: Contaminant Precipitation at Pfizer and Medarex
                                                                                                        addresses:
                                                 Fig 7a. precipitation based process     Fig 7b. TFF based process

                                                        Contaminant
                                                        precipitation
                                                                                           Protein A pool volumes
                                                                                             TFF


                                                                                           and step cost

                                                                                           DNA & HCP levels post
                                                                                                        HCP < 1000 ng/mg
                                                             CEX         HCP < 10ng/mg      CEX


                                                                        Dilution
                                                                                           Capturing
                                                                                                 Dilution

                                                          Q Membrane                       Q Membrane   HCP < 1000 ng/mg
                                                                         HCP BDL              2 g/ml
                                                            20 g/ml
                                                                                                        Dilution
                                                               VF
                                                                                             Mix Mode


                                                                                                VF
     Process Scale Precipitation of           Precipitation of Process-Derived
    Impurities in Mammalian Cell Culture      Impurities in Non-Protein A
    Broth; J. Glynn et al. In: Gottschalk U   Purification Schemes for MAb; J. Wang
    (ed) Process-scale Purification of        et al. BioPharm Intl. 10/2009, 2-9
    Antibodies. Wiley, NY.
Source: 2nd Annual Survey of the Bioprocessing Market
for Single-Use Solutions
Aspen Brook Consulting, 2010
Chromatography Technologies for DSP




                                              Polishing (Membranes)
                                              • Highly porous structure
                                              • Pore size: 3 – 5μm
                                              • Convective Flow
       Capturing/IP (Resins)
                                              • Minimal buffer use
       • Bead size distribution: 15 -160 μm
       • Average pore size: 15 - 40 nm
       • Diffusion limited flow
       • High capacity
Capture Costs: Why bother?




      Jim Davis, Lonza Economics of Monoclonal Antibody Production: The relationship between upstream titer and
      downstream costs; IBC San Diego March 2008
Protein A costs are not an issue at large scale with full total capacity utilization




        6th Annual Survey of Biopharmaceutical Manufacturing.
        Eric S. Langer, BioPlan Associates Inc.
Alternatives to Protein A Capture


• Product precipitation batch/continuous

• Impurity precipitation (followed by non-Protein A process)

• Alternative Capturing (Protein A Mimetics, Mixed Mode, CEX)



Issues: Selectivity, Scale up, Reproducibility, Comparability
addresses:

                                     Protein A pool volumes
                                     and step cost




D. Low BioManufacturing Paris 2007
Alternative Protein A Chromatography Formats:
Goal: Intensified Use/Volume Reduction
• Simulated Moving Bed (SMB) and related:
   » Tarpon („single use flow path“)
   » Novasep
   » Chromacon
   » Chromatan
   » ...
   ______________________________________________________________________

• Expanded Bed Chromatography
   » DSM/Upfront („single use flow path“)

Issues: Complexity, Scale up, Reproducibility, Comparability
Alternative Protein A Formats:
Goal: Low Cost – Real Single Use
   2000: Oleosin Platform             2005: TMV Nanoparticles                     2010: Bio Polyester Platform
                                                                                                                      Polyester
                                                                                                                      Synthase




                                                                                                     Polyester Granule
                                      Immunoabsorbent nanoparticles based on a                         100-300 nm
                                      tobacco mosaic virus displaying protein A
Limitation: Oleosin yields < 1kg/ha   S. Werner et al. PNAS 103, 17678 - 17683
                                                                                  Grage, K. and Rehm, B.H.A. (2008)
                                                                                  Bioconj. Chemistry, 19(1):254-62.
Convective Media are Part of the Design Space in Polishing




                     ...
Agenda


         1.Improving throughput –
         1.Improving throughput –
           The Capacity Disconnect
           The Capacity Disconnect

         2.Process Economy – Cost
         2.Process Economy – Cost
           of Goods matter
           of Goods matter

         3.Discovering new Shores -
         3.Discovering new Shores -
           Fortune favors the Brave
           Fortune favors the Brave

         4.Benchmarks of the Future
         4.Benchmarks of the Future
           – No best, just better
           – No best, just better

         5.The Future of DSP –
         5.The Future of DSP –
           Revisiting the Past
           Revisiting the Past
The Renaissance of Protein Purification




         Michelangelo de Lodovico Buonarotti
Old Enabling Technology: Boring but Reliable


                                               • Centrifugation

                                               • Extraction

                                               • Precipitation

                                               • Filtration

                                               • Crystallization

                                               • UV-Inactivation
Thank you!




Uwe.Gottschalk@sartorius-
stedim.com

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Shanghai 2010

  • 1. “The new era of Downstream Processing: From a Bottleneck to a Pacemaker” Platzhalter Bild BioManufacturing World Oct. 19 2010 Uwe Gottschalk VP Purification Technologies, Sartorius Stedim Biotech
  • 2. Finally there seems to be a Bottleneck ... 6th Annual Survey of Biopharmaceutical Manufacturing. Eric S. Langer, BioPlan Associates Inc.
  • 3. Who is facing Limitations? “Obviously there is no downstream bottleneck  if you have unlimited cash” – K. John Morrow, Jr., PhD., 2009
  • 4. Agenda 1.Improving throughput – 1.Improving throughput – The Capacity Disconnect The Capacity Disconnect 2.Process Economy – Cost 2.Process Economy – Cost of Goods matter of Goods matter 3.Discovering new Shores - 3.Discovering new Shores - Fortune favors the Brave Fortune favors the Brave 4.Benchmarks of the Future 4.Benchmarks of the Future – No best, just better – No best, just better 5.The Future of DSP – 5.The Future of DSP – Revisiting the Past Revisiting the Past Data adapted from: F. Wurm Production of recombinant Protein Therapeutics in Cultivated Mammalian Cells. Nature Biotechnology 22, 1-6 (2004)
  • 5. Hot Topic: High Titer Processes Improving Titres – MAbs (Bulk API) Titre Improvements 4 Bioreactors 800 Important cost benefits as titres go beyond 1g/L 700 Estimate of CoG based on These diminish as we go 600 standard MAb process for beyond 5g/L bulk drug substance 500 COG ($/g) 400 Beyond 5g/L 300 Downstream cost dominates In this example the plateau 200 is just under $100/g 100 0 Challenge in DSP 0 2 4 6 8 10 12 Bioreactors decrease in size? Titre (g/L) Cope with increased titres 2000L 5000L Need to drive out costs Implications for facility design Results from Biopharm Services Generic MAb cost model Bulk API Direct manufacturing costs A universal cost model for single use systems in biomanufacturing. Andrew Sinclair, BioPharm Services; Berlin Oct. 2007
  • 6.
  • 7. Agenda 1.Improving throughput – 1.Improving throughput – The Capacity Disconnect The Capacity Disconnect 2.Process Economy – Cost of 2.Process Economy – Cost of Goods matter Goods matter 3.Discovering new Shores - 3.Discovering new Shores - Fortune favors the Brave Fortune favors the Brave 4. Benchmarks of the Future 4. Benchmarks of the Future – No best, just better – No best, just better 5.The Future of DSP – 5.The Future of DSP – Revisiting the Past Revisiting the Past
  • 8. Challenges of a Modern Downstream Process Technical challenge  Sensitive and technically demanding products require processes with inherent complexity and expensive infrastructure  Need for robust & scalable processes for the entire DSP  Increasing regulatory scrutiny (Comparability!) Financial challenge  Processes are fixed-cost driven (Investment vs Consumables)  Manufacturing costs 15 - 25% of sales price  Costs for DSP up to 75% of manufacturing costs  Cost Balance Benefit for innovative treatments  Biosimilars
  • 9. Typical COG breakdown by Category MAb manufacturing: 6 x 2,000L tanks, 2g/L, 90% utilisation; 211 #/a; 527 kg/yr; invest 172 Mio Euro; 142 $/g; Sinclair 2006
  • 10. Hot Topic: Use of Disposables
  • 11. J. Zhou BPI Vienna 2008
  • 12. Agenda 1.Improving throughput – 1.Improving throughput – The Capacity Disconnect The Capacity Disconnect 2.Process Economy – Cost 2.Process Economy – Cost of Goods matter of Goods matter 3.Discovering new Shores - 3.Discovering new Shores - Fortune favors the Brave Fortune favors the Brave 4.Benchmarks of the Future 4.Benchmarks of the Future – No best, just better – No best, just better 5.The Future of DSP – 5.The Future of DSP – Revisiting the Past Revisiting the Past
  • 13. A Consensus – Value Chain in Bioseparation High Titer Implications: Increasing biomass and contaminant levels Protein A pool volumes and step cost DNA & HCP levels post Capturing Polishing load volumes and conductivity Pathogen clearance as a moving target
  • 14. Downstream Processing 1980 “If it ain’t broke, don’t fix it” – Bert Lance, 1977
  • 15. Downstream Processing 2010 “Le mieux est l’ennemi du bien” (better is the enemy of good) – Voltaire, 1772 “没有最好,只有更好” (No best – only better) – Chinese Movie Cliche
  • 16. Agenda 1.Improving throughput – 1.Improving throughput – The Capacity Disconnect The Capacity Disconnect 2.Process Economy – Cost 2.Process Economy – Cost of Goods matter of Goods matter 3.Discovering new Shores - 3.Discovering new Shores - Fortune favors the Brave Fortune favors the Brave 4.Benchmarks of the Future 4.Benchmarks of the Future – No best, just better – No best, just better 5.The Future of DSP – 5.The Future of DSP – Revisiting the Past Revisiting the Past
  • 17. Biomass Removal and Early Contaminant Clearance addresses: Increasing biomass and contaminant levels DNA & HCP levels post Capturing • New generation of lenticular filtration media • No Diatomeaceous Earth; Synthetic • Cell removal, clarification & early on contaminant removal
  • 18. The Vision of a Disposable Chromatography Process Robert van Reis: Future Trends in Bioseparations; Recovery XII, 2006
  • 19. Process Chromatography: What are the Options? John Curling and Uwe Gottschalk BioPharm Intl. October 2007 U. Gottschalk. Bioseparation in antibody manufacturing: The good, the bad and the ugly. Biotechnol Prog. 2008 May-Jun;24(3):496-503.
  • 20. Medarex: Non-Protein A based Purification Processes: Scheme Evolution 2 columns + 1 column + 3 columns 1 membrane 2 columns 1 membrane Unprocessed Bulk Unprocessed Bulk Unprocessed Bulk Unprocessed Bulk CEX CEX CEX CEX Chromatography Chromatography Chromatography Chromatography Viral Inactivation Viral Inactivation Viral Inactivation Viral Inactivation AEX AEX Membrane HCIC AEX Membrane Chromatography chromatography Chromatography Chromatography Mixed Mode Mixed Mode Viral Filtration Viral Filtration chromatography chromatography Viral Filtration Viral Filtration Page 26 Alahari 2009
  • 21. Two Birds – one Stone: Contaminant Precipitation at Pfizer and Medarex addresses: Fig 7a. precipitation based process Fig 7b. TFF based process Contaminant precipitation Protein A pool volumes TFF and step cost DNA & HCP levels post HCP < 1000 ng/mg CEX HCP < 10ng/mg CEX Dilution Capturing Dilution Q Membrane Q Membrane HCP < 1000 ng/mg HCP BDL 2 g/ml 20 g/ml Dilution VF Mix Mode VF Process Scale Precipitation of Precipitation of Process-Derived Impurities in Mammalian Cell Culture Impurities in Non-Protein A Broth; J. Glynn et al. In: Gottschalk U Purification Schemes for MAb; J. Wang (ed) Process-scale Purification of et al. BioPharm Intl. 10/2009, 2-9 Antibodies. Wiley, NY.
  • 22. Source: 2nd Annual Survey of the Bioprocessing Market for Single-Use Solutions Aspen Brook Consulting, 2010
  • 23. Chromatography Technologies for DSP Polishing (Membranes) • Highly porous structure • Pore size: 3 – 5μm • Convective Flow Capturing/IP (Resins) • Minimal buffer use • Bead size distribution: 15 -160 μm • Average pore size: 15 - 40 nm • Diffusion limited flow • High capacity
  • 24. Capture Costs: Why bother? Jim Davis, Lonza Economics of Monoclonal Antibody Production: The relationship between upstream titer and downstream costs; IBC San Diego March 2008
  • 25. Protein A costs are not an issue at large scale with full total capacity utilization 6th Annual Survey of Biopharmaceutical Manufacturing. Eric S. Langer, BioPlan Associates Inc.
  • 26. Alternatives to Protein A Capture • Product precipitation batch/continuous • Impurity precipitation (followed by non-Protein A process) • Alternative Capturing (Protein A Mimetics, Mixed Mode, CEX) Issues: Selectivity, Scale up, Reproducibility, Comparability
  • 27. addresses: Protein A pool volumes and step cost D. Low BioManufacturing Paris 2007
  • 28. Alternative Protein A Chromatography Formats: Goal: Intensified Use/Volume Reduction • Simulated Moving Bed (SMB) and related: » Tarpon („single use flow path“) » Novasep » Chromacon » Chromatan » ... ______________________________________________________________________ • Expanded Bed Chromatography » DSM/Upfront („single use flow path“) Issues: Complexity, Scale up, Reproducibility, Comparability
  • 29. Alternative Protein A Formats: Goal: Low Cost – Real Single Use 2000: Oleosin Platform 2005: TMV Nanoparticles 2010: Bio Polyester Platform Polyester Synthase Polyester Granule Immunoabsorbent nanoparticles based on a 100-300 nm tobacco mosaic virus displaying protein A Limitation: Oleosin yields < 1kg/ha S. Werner et al. PNAS 103, 17678 - 17683 Grage, K. and Rehm, B.H.A. (2008) Bioconj. Chemistry, 19(1):254-62.
  • 30. Convective Media are Part of the Design Space in Polishing ...
  • 31. Agenda 1.Improving throughput – 1.Improving throughput – The Capacity Disconnect The Capacity Disconnect 2.Process Economy – Cost 2.Process Economy – Cost of Goods matter of Goods matter 3.Discovering new Shores - 3.Discovering new Shores - Fortune favors the Brave Fortune favors the Brave 4.Benchmarks of the Future 4.Benchmarks of the Future – No best, just better – No best, just better 5.The Future of DSP – 5.The Future of DSP – Revisiting the Past Revisiting the Past
  • 32. The Renaissance of Protein Purification Michelangelo de Lodovico Buonarotti
  • 33. Old Enabling Technology: Boring but Reliable • Centrifugation • Extraction • Precipitation • Filtration • Crystallization • UV-Inactivation