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Isabela Zuleta Zuleta
Third semester
Type 2 diabetes
mellitus
Is the most common endocrine disease. Is
a serious, complex chronic condition
characterized by hyperglycaemia and
insulin resistance.
ecc DNAs
Increased SORBS1 eccDNA circle is
associated with insulin resistance.
SORBS1, a novel eccDNA, is
validated as the most significant
up-regulated eccDNA in serum
from patients with DM2.
Are a group of novel circular DNAs,
physically derived from genomic DNA.
They contribute to oncogene plasticity
and drug resistance.
SORBS1circle
Evaluate the increased serum
extrachromosomal circular DNA
SORBS1circle level associated
with insulin resistance in
patients with newly diagnosed
type 2 diabetes mellitus
General objective
METHODS
CIRCLE SEQUENCING QUANTITATIVE PCR
Peripheral venous blood (5 ml) was collected
using vacutainer serum tubes from fasting
participants of at least 12 h, DNA extractions
were performed For linear DNA removal and
eccDNA enrichment, DNA was sequenced to
align with the reference genome to detect
eccDNA in all samples to obtain read counts with
EdgeR software (v0.6.9) to normalize and identify
differentially expressed ecDNA filtered by p-
value..
it was done by quantitatively and specifically
amplifying the proteins that encode serum
extrachromosomal circular DNA SORBS1
METHODS
WESTERN BLOT FISH
The obtained proteins were separated by SDS-
PAGE and immediately transferred to
nitrocellulose membranes. The membranes
were incubated with primary antibodies
overnight and then with appropriate secondary
antibodies for 2 hours. The antibodies used
were phosphorylated protein kinase B, total Akt,
Bcl-2 and Bax.
HepG2 cells were first fixed with 4%
paraformaldehyde for 10 min at room temperature
and treated with 0.5% Triton X-100 for 20 min at 4
℃ . After washing with PBS buffer three times, the
cells were treated with prehybridization buffer at 37
℃ for 30 min, and then incubated with hybridization
buffer at 37 ℃ overnight. After incubation, the cells
were washed with 4 × saline, sodium citrate with
0.1% Tween-20 three times at 42 ℃, followedcon 2
× SSC, 1 × SSC at 42 ℃ and then with PBS once at
room temperature. The nuclei were labeled with DAPI
RESULTS
1
2 3
RESULTS
4 5 6
CONCLUSION
AUTHOR
The host gene SORBS1 is an
important adaptor protein in the
signaling pathway of insulin-
stimulated glucose uptake
CA Bauman
Qin Yang
Siqian Gong
OPINION
Insulin resistance occurs when
target tissues, such as the liver,
become less sensitive
to the effects of insulin
Genetic variation of SORBS1 gene
is associated with glucose
homeostasis of diabetes
CONCLUSIONS
The identification of changes in eccDNA expression in
T2DM patients, as well as the characterization of
eccDNA SORBS1circle as a specific marker, highlights
the importance of understanding the underlying
molecular mechanisms in the pathogenesis of diabetes
and provides a basis for the development of new
diagnostic and therapeutic strategies
The ability to identify and validate specific eccDNAs, such
as SORBS1circle, as potential biomarkers highlights the
crucial role of molecular biology in identifying new
therapeutic targets and developing more precise and
personalized diagnostic tools for metabolic diseases like
diabetes
Seminario Biología Molecular - Isabela Zuleta

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Seminario Biología Molecular - Isabela Zuleta

  • 2. Type 2 diabetes mellitus Is the most common endocrine disease. Is a serious, complex chronic condition characterized by hyperglycaemia and insulin resistance.
  • 3. ecc DNAs Increased SORBS1 eccDNA circle is associated with insulin resistance. SORBS1, a novel eccDNA, is validated as the most significant up-regulated eccDNA in serum from patients with DM2. Are a group of novel circular DNAs, physically derived from genomic DNA. They contribute to oncogene plasticity and drug resistance. SORBS1circle
  • 4. Evaluate the increased serum extrachromosomal circular DNA SORBS1circle level associated with insulin resistance in patients with newly diagnosed type 2 diabetes mellitus General objective
  • 5. METHODS CIRCLE SEQUENCING QUANTITATIVE PCR Peripheral venous blood (5 ml) was collected using vacutainer serum tubes from fasting participants of at least 12 h, DNA extractions were performed For linear DNA removal and eccDNA enrichment, DNA was sequenced to align with the reference genome to detect eccDNA in all samples to obtain read counts with EdgeR software (v0.6.9) to normalize and identify differentially expressed ecDNA filtered by p- value.. it was done by quantitatively and specifically amplifying the proteins that encode serum extrachromosomal circular DNA SORBS1
  • 6. METHODS WESTERN BLOT FISH The obtained proteins were separated by SDS- PAGE and immediately transferred to nitrocellulose membranes. The membranes were incubated with primary antibodies overnight and then with appropriate secondary antibodies for 2 hours. The antibodies used were phosphorylated protein kinase B, total Akt, Bcl-2 and Bax. HepG2 cells were first fixed with 4% paraformaldehyde for 10 min at room temperature and treated with 0.5% Triton X-100 for 20 min at 4 ℃ . After washing with PBS buffer three times, the cells were treated with prehybridization buffer at 37 ℃ for 30 min, and then incubated with hybridization buffer at 37 ℃ overnight. After incubation, the cells were washed with 4 × saline, sodium citrate with 0.1% Tween-20 three times at 42 ℃, followedcon 2 × SSC, 1 × SSC at 42 ℃ and then with PBS once at room temperature. The nuclei were labeled with DAPI
  • 9. CONCLUSION AUTHOR The host gene SORBS1 is an important adaptor protein in the signaling pathway of insulin- stimulated glucose uptake CA Bauman Qin Yang Siqian Gong OPINION Insulin resistance occurs when target tissues, such as the liver, become less sensitive to the effects of insulin Genetic variation of SORBS1 gene is associated with glucose homeostasis of diabetes
  • 10. CONCLUSIONS The identification of changes in eccDNA expression in T2DM patients, as well as the characterization of eccDNA SORBS1circle as a specific marker, highlights the importance of understanding the underlying molecular mechanisms in the pathogenesis of diabetes and provides a basis for the development of new diagnostic and therapeutic strategies The ability to identify and validate specific eccDNAs, such as SORBS1circle, as potential biomarkers highlights the crucial role of molecular biology in identifying new therapeutic targets and developing more precise and personalized diagnostic tools for metabolic diseases like diabetes