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Rescue, Preservation, and
Dissemination of Geochemical Data
            Matthew T. Boulanger
            Michael D. Glascock

           Archaeometry Laboratory
        University of Missouri–Columbia

       http://archaeometry.missouri.edu/


                                                     74th Annual Meeting
                                           April 22–26, 2009, Atlanta, GA
   2 case studies demonstrating the centrality of
    data-management policies
   What happens to our data once our
    laboratories close?
   How can we minimize potential data loss?
   Past efforts to address these issues have largely
    gone unheeded or have been forgotten
     SARCAR (Beck 1984, Bishop et al. 1984)
     Archaeometric Clearinghouse (J. of Field Arch.)
   Est. 1970s
                                              Operated Regularly
                                               between 1970s and
                                               1990s
                                              6000+ samples
                                               analyzed
                                              Primarily European
                                               and Mediterranean
                                               Pottery

Newton, G.W.A., J. Bourriau, E.B. French, and A.J.N.W. Prag
2007 INAA of Archaeological Samples at the University of Manchester.
Archaeometry 49(2): 289-299.
   Digital Records
    Transferred to MURR
    lab in 2006
   Data represent most
    archaeological ceramic
    samples analyzed at the
    lab
     Elemental abundances
     Minimal contextual and
      descriptive information
     Small number of samples
      with no clear
      archaeological association
   Goals
       Standardize data formats and concentration data
       Preserve additional products of the lab
         Analytical software
         Standard conversion factors
         Bibliographic citations
       Make data available through the WWW
       Identify and obtain relevant publications
       Reconstruct contextual and descriptive information
   Est. 1950s
                                              Operated Regularly
                                               between 1960s and
                                               1980s
                                              10,000-12,000 samples
                                               analyzed
                                              Samples from Europe,
                                               Asia, Africa, and the
                                               Americas
Asaro, F., D. Adan-Bayewitz
2007 The History of the Lawrence Berkeley National Laboratory Instrumental
Neutron Activation Analysis Programme for Archaeological and Geological
Materials. Archaeometry 49(2): 201-214.
   Goals
     Transcribe elemental abundances into digital format
     Scan/transcribe contextual/descriptive data
     Produce archival quality digital images of all
      correspondence, paperwork, and photographs
     Assure long-term storage of all LBNL materials
     Identify and obtain relevant publications
     Combine descriptive data with compositional data
     Collect data from COM Microfiche
2


              1

                                                                                                                     KIT-4 Raw
                                                                                                                     KIT-4 Adjusted
              0
                  As   La   Lu   Nd   Sm   U   Yb   Ce   Co   Cr   Cs   Eu   Fe   Hf   Ni   Rb   Sb   Sc   Sr   Ta     Tb     Th      Zn
              2


              1
LBNL  MURR




                                                                                                                KIT-11 Raw
                                                                                                                KIT-11 Adjusted
              0
                  As   La   Lu   Nd   Sm   U   Yb   Ce   Co   Cr   Cs   Eu   Fe   Hf   Ni   Rb   Sb   Sc   Sr   Ta     Tb     Th      Zn
              2


              1
                                                                                                                  KIT-26 Raw
                                                                                                                  KIT-26 Adjusted
              0
                  As   La   Lu   Nd   Sm   U   Yb   Ce   Co   Cr   Cs   Eu   Fe   Hf   Ni   Rb   Sb   Sc   Sr   Ta     Tb     Th      Zn
              2


              1

                                                                                                                KIT-33 Raw
                                                                                                                KIT-33 Adjusted
              0
                  As   La   Lu   Nd   Sm   U   Yb   Ce   Co   Cr   Cs   Eu   Fe   Hf   Ni   Rb   Sb   Sc   Sr   Ta     Tb     Th      Zn
   Digital file storage facilitates, but does not
    ensure, data preservation
       Legacy software and hardware
       Inconsistent file structures
       Complimented with archival-quality paper records
   Contextual and descriptive data are at best
    unstandardized, and at worst absent
       Typically provided in paper documentation
        accompanying samples
   Analytical protocol are rarely specified
   Develop, implement, and maintain storage of:
     Elemental abundances and error determinations
     Contextual and descriptive data
     Analytical Protocol

   File-naming conventions
       “AC245.per” → “Rehman_1989_NAA_Ceramic.per”
   Metadata structures
     Metadata are used to describe the context, content, and
      structure of data file
     Who, what, when, where, why, and how of associated
      data
   Models from the geological community
       National Geochemical Database
         http://minerals.cr.usgs.gov/projects/geochem_database/index.html

       Canadian Geochemical Surveys
         http://gdr.nrcan.gc.ca/geochem/

       EarthChem
         http://www.earthchem.org/

       GeoRem
         http://georem.mpch-mainz.gwdg.de/
   Web pages
     HTML or XHTML
     Static
     Minimal graphics, scripts, or other
      interactive features
   Data distribution
       Microsoft Excel format (*.XLS)
         Widely supported, but proprietary
         Cross platform, but dependent upon software
       Comma-separated (*.CSV)
         As close to “open” as possible
         Platform and software independent
http://creativecommons.org/
   Manchester Database [Online]
       http://archaeometry.missouri.edu/datasets/uman/index.html
   Berkeley Database [In Progress]
       http://archaeometry.missouri.edu/datasets/lbnl/index.html
   MURR Database
       http://archaeometry.missouri.edu/datasets/datasets.html




                Questions About These Data?
                         boulangerm@missouri.edu
   Drs. F. Asaro, G. Newton, J. Tomlinson, J. Prag, and J.
    Speakman provided significant assistance with this project
   K. Walton, J. Masters, B. Alex, A. Crawford, and A. Watkins
    helped transcribe and check LBNL data
   Dr. D. Schwarz and B. Chancellor are assisting in the
    development of the new Archaeometry Laboratory database




                  The MURR Archaeometry Laboratory
is supported by a grant from the National Science Foundation (#0504015)

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Salvage Archaeometry: Rescue, Preservation, and Dissemination of Geochemical Data

  • 1. Rescue, Preservation, and Dissemination of Geochemical Data Matthew T. Boulanger Michael D. Glascock Archaeometry Laboratory University of Missouri–Columbia http://archaeometry.missouri.edu/ 74th Annual Meeting April 22–26, 2009, Atlanta, GA
  • 2.
  • 3. 2 case studies demonstrating the centrality of data-management policies  What happens to our data once our laboratories close?  How can we minimize potential data loss?  Past efforts to address these issues have largely gone unheeded or have been forgotten  SARCAR (Beck 1984, Bishop et al. 1984)  Archaeometric Clearinghouse (J. of Field Arch.)
  • 4. Est. 1970s  Operated Regularly between 1970s and 1990s  6000+ samples analyzed  Primarily European and Mediterranean Pottery Newton, G.W.A., J. Bourriau, E.B. French, and A.J.N.W. Prag 2007 INAA of Archaeological Samples at the University of Manchester. Archaeometry 49(2): 289-299.
  • 5. Digital Records Transferred to MURR lab in 2006  Data represent most archaeological ceramic samples analyzed at the lab  Elemental abundances  Minimal contextual and descriptive information  Small number of samples with no clear archaeological association
  • 6. Goals  Standardize data formats and concentration data  Preserve additional products of the lab  Analytical software  Standard conversion factors  Bibliographic citations  Make data available through the WWW  Identify and obtain relevant publications  Reconstruct contextual and descriptive information
  • 7. Est. 1950s  Operated Regularly between 1960s and 1980s  10,000-12,000 samples analyzed  Samples from Europe, Asia, Africa, and the Americas Asaro, F., D. Adan-Bayewitz 2007 The History of the Lawrence Berkeley National Laboratory Instrumental Neutron Activation Analysis Programme for Archaeological and Geological Materials. Archaeometry 49(2): 201-214.
  • 8.
  • 9. Goals  Transcribe elemental abundances into digital format  Scan/transcribe contextual/descriptive data  Produce archival quality digital images of all correspondence, paperwork, and photographs  Assure long-term storage of all LBNL materials  Identify and obtain relevant publications  Combine descriptive data with compositional data  Collect data from COM Microfiche
  • 10. 2 1 KIT-4 Raw KIT-4 Adjusted 0 As La Lu Nd Sm U Yb Ce Co Cr Cs Eu Fe Hf Ni Rb Sb Sc Sr Ta Tb Th Zn 2 1 LBNL MURR KIT-11 Raw KIT-11 Adjusted 0 As La Lu Nd Sm U Yb Ce Co Cr Cs Eu Fe Hf Ni Rb Sb Sc Sr Ta Tb Th Zn 2 1 KIT-26 Raw KIT-26 Adjusted 0 As La Lu Nd Sm U Yb Ce Co Cr Cs Eu Fe Hf Ni Rb Sb Sc Sr Ta Tb Th Zn 2 1 KIT-33 Raw KIT-33 Adjusted 0 As La Lu Nd Sm U Yb Ce Co Cr Cs Eu Fe Hf Ni Rb Sb Sc Sr Ta Tb Th Zn
  • 11. Digital file storage facilitates, but does not ensure, data preservation  Legacy software and hardware  Inconsistent file structures  Complimented with archival-quality paper records  Contextual and descriptive data are at best unstandardized, and at worst absent  Typically provided in paper documentation accompanying samples  Analytical protocol are rarely specified
  • 12. Develop, implement, and maintain storage of:  Elemental abundances and error determinations  Contextual and descriptive data  Analytical Protocol  File-naming conventions  “AC245.per” → “Rehman_1989_NAA_Ceramic.per”  Metadata structures  Metadata are used to describe the context, content, and structure of data file  Who, what, when, where, why, and how of associated data
  • 13. Models from the geological community  National Geochemical Database  http://minerals.cr.usgs.gov/projects/geochem_database/index.html  Canadian Geochemical Surveys  http://gdr.nrcan.gc.ca/geochem/  EarthChem  http://www.earthchem.org/  GeoRem  http://georem.mpch-mainz.gwdg.de/
  • 14.
  • 15. Web pages  HTML or XHTML  Static  Minimal graphics, scripts, or other interactive features  Data distribution  Microsoft Excel format (*.XLS)  Widely supported, but proprietary  Cross platform, but dependent upon software  Comma-separated (*.CSV)  As close to “open” as possible  Platform and software independent
  • 17. Manchester Database [Online]  http://archaeometry.missouri.edu/datasets/uman/index.html  Berkeley Database [In Progress]  http://archaeometry.missouri.edu/datasets/lbnl/index.html  MURR Database  http://archaeometry.missouri.edu/datasets/datasets.html Questions About These Data? boulangerm@missouri.edu
  • 18. Drs. F. Asaro, G. Newton, J. Tomlinson, J. Prag, and J. Speakman provided significant assistance with this project  K. Walton, J. Masters, B. Alex, A. Crawford, and A. Watkins helped transcribe and check LBNL data  Dr. D. Schwarz and B. Chancellor are assisting in the development of the new Archaeometry Laboratory database The MURR Archaeometry Laboratory is supported by a grant from the National Science Foundation (#0504015)