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Regular Expressions
  grep and egrep
Previously
• Basic UNIX Commands
   – Files: rm, cp, mv, ls, ln
   – Processes: ps, kill
• Unix Filters
   –   cat, head, tail, tee, wc
   –   cut, paste
   –   find
   –   sort, uniq
   –   tr
Subtleties of commands
•   Executing commands with find
•   Specification of columns in cut
•   Specification of columns in sort
•   Methods of input
    – Standard in
    – File name arguments
    – Special "-" filename
• Options for uniq
Today
• Regular Expressions
  – Allow you to search for text in files
  – grep command
• Stream manipulation:
  – sed
Regular Expressions
What Is a Regular Expression?
• A regular expression (regex) describes a set of
  possible input strings.
• Regular expressions descend from a fundamental
  concept in Computer Science called finite
  automata theory
• Regular expressions are endemic to Unix
   –   vi, ed, sed, and emacs
   –   awk, tcl, perl and Python
   –   grep, egrep, fgrep
   –   compilers
Regular Expressions
• The simplest regular expressions are a
  string of literal characters to match.
• The string matches the regular expression if
  it contains the substring.
regular expression    c k s


UNIX Tools rocks.

                        match



UNIX Tools sucks.
                        match



UNIX Tools is okay.
                        no match
Regular Expressions
• A regular expression can match a string in
  more than one place.

            regular expression   a p p l e

  Scrapple from the apple.
         match 1                   match 2
Regular Expressions
• The . regular expression can be used to
  match any character.
                regular expression       o .

     For me to poop on.
      match 1                  match 2
Character Classes
• Character classes [] can be used to match
  any specific set of characters.

             regular expression   b [eor] a t

 beat a brat on a boat
   match 1      match 2           match 3
Negated Character Classes
• Character classes can be negated with the
  [^] syntax.

           regular expression   b [^eo] a t

 beat a brat on a boat
              match
More About Character Classes
   – [aeiou] will match any of the characters a, e, i, o,
     or u
   – [kK]orn will match korn or Korn
• Ranges can also be specified in character classes
   – [1-9] is the same as [123456789]
   – [abcde] is equivalent to [a-e]
   – You can also combine multiple ranges
      • [abcde123456789] is equivalent to [a-e1-9]
   – Note that the - character has a special meaning in a
     character class but only if it is used within a range,
     [-123] would match the characters -, 1, 2, or 3
Named Character Classes
• Commonly used character classes can be
  referred to by name (alpha, lower, upper,
  alnum, digit, punct, cntrl)
• Syntax [:name:]
  – [a-zA-Z]         [[:alpha:]]
  – [a-zA-Z0-9]      [[:alnum:]]
  – [45a-z]          [45[:lower:]]
• Important for portability across languages
Anchors
• Anchors are used to match at the beginning or end
  of a line (or both).
• ^ means beginning of the line
• $ means end of the line
regular expression         ^ b [eor] a t

beat a brat on a boat
  match


regular expression        b [eor] a t $

  beat a brat on a boat
                                   match


                     ^word$         ^$
Repetition
• The * is used to define zero or more
  occurrences of the single regular expression
  preceding it.
regular expression        y a * y

I got mail, yaaaaaaaaaay!
                                match



          regular expression        o a * o

 For me to poop on.
                      match


                           .*
Match length
• A match will be the longest string that
  satisfies the regular expression.

            regular expression   a . * e

  Scrapple from the apple.
           no             no        yes
Repetition Ranges
• Ranges can also be specified
  – { } notation can specify a range of repetitions
    for the immediately preceding regex
  – {n} means exactly n occurrences
  – {n,} means at least n occurrences
  – {n,m} means at least n occurrences but no
    more than m occurrences
• Example:
  – .{0,} same as .*
  – a{2,} same as aaa*
Subexpressions
• If you want to group part of an expression so that
  * or { } applies to more than just the previous
  character, use ( ) notation
• Subexpresssions are treated like a single character
   – a* matches 0 or more occurrences of a
   – abc* matches ab, abc, abcc, abccc, …
   – (abc)* matches abc, abcabc, abcabcabc, …
   – (abc){2,3} matches abcabc or abcabcabc
grep
• grep comes from the ed (Unix text editor) search
  command “global regular expression print” or
  g/re/p
• This was such a useful command that it was
  written as a standalone utility
• There are two other variants, egrep and fgrep that
  comprise the grep family
• grep is the answer to the moments where you
  know you want the file that contains a specific
  phrase but you can’t remember its name
Family Differences
• grep - uses regular expressions for pattern
  matching
• fgrep - file grep, does not use regular expressions,
  only matches fixed strings but can get search
  strings from a file
• egrep - extended grep, uses a more powerful set of
  regular expressions but does not support
  backreferencing, generally the fastest member of
  the grep family
• agrep – approximate grep; not standard
Syntax
• Regular expression concepts we have seen so
  far are common to grep and egrep.
• grep and egrep have slightly different syntax
  – grep: BREs
  – egrep: EREs (enhanced features we will discuss)
• Major syntax differences:
  – grep: ( and ), { and }
  – egrep: ( and ), { and }
Protecting Regex
            Metacharacters
• Since many of the special characters used in
  regexs also have special meaning to the
  shell, it’s a good idea to get in the habit of
  single quoting your regexs
  – This will protect any special characters from
    being operated on by the shell
  – If you habitually do it, you won’t have to worry
    about when it is necessary
Escaping Special Characters
• Even though we are single quoting our regexs so the
  shell won’t interpret the special characters, some
  characters are special to grep (eg * and .)
• To get literal characters, we escape the character with
  a  (backslash)
• Suppose we want to search for the character sequence
  a*b*
   – Unless we do something special, this will match zero or
     more ‘a’s followed by zero or more ‘b’s, not what we want
   – a*b* will fix this - now the asterisks are treated as
     regular characters
Egrep: Alternation
• Regex also provides an alternation character | for
  matching one or another subexpression
   – (T|Fl)an will match ‘Tan’ or ‘Flan’
   – ^(From|Subject): will match the From and
     Subject lines of a typical email message
      • It matches a beginning of line followed by either the characters
        ‘From’ or ‘Subject’ followed by a ‘:’
• Subexpressions are used to limit the scope of the
  alternation
   – At(ten|nine)tion then matches “Attention” or
     “Atninetion”, not “Atten” or “ninetion” as would
     happen without the parenthesis - Atten|ninetion
Egrep: Repetition Shorthands
• The * (star) has already been seen to specify zero
  or more occurrences of the immediately preceding
  character
• + (plus) means “one or more”
    abc+d will match ‘abcd’, ‘abccd’, or ‘abccccccd’ but
     will not match ‘abd’
    Equivalent to {1,}
Egrep: Repetition Shorthands cont
• The ‘?’ (question mark) specifies an optional character,
  the single character that immediately precedes it
    July? will match ‘Jul’ or ‘July’
    Equivalent to {0,1}
    Also equivalent to (Jul|July)
• The *, ?, and + are known as quantifiers because they
  specify the quantity of a match
• Quantifiers can also be used with subexpressions
   – (a*c)+ will match ‘c’, ‘ac’, ‘aac’ or ‘aacaacac’ but will not
      match ‘a’ or a blank line
Grep: Backreferences
• Sometimes it is handy to be able to refer to a
  match that was made earlier in a regex
• This is done using backreferences
   – n is the backreference specifier, where n is a number
• Looks for nth subexpression
• For example, to find if the first word of a line is
  the same as the last:
   – ^([[:alpha:]]{1,}) .* 1$
   – The ([[:alpha:]]{1,}) matches 1 or more
     letters
Practical Regex Examples
• Variable names in C
  – [a-zA-Z_][a-zA-Z_0-9]*
• Dollar amount with optional cents
  – $[0-9]+(.[0-9][0-9])?
• Time of day
  – (1[012]|[1-9]):[0-5][0-9] (am|pm)
• HTML headers <h1> <H1> <h2> …
  – <[hH][1-4]>
grep Family
• Syntax
  grep [-hilnv] [-e expression] [filename]
  egrep [-hilnv] [-e expression] [-f filename] [expression]
    [filename]
  fgrep [-hilnxv] [-e string] [-f filename] [string] [filename]
  – -h Do not display filenames
  – -i Ignore case
  – -l List only filenames containing matching lines
  – -n Precede each matching line with its line number
  – -v Negate matches
  – -x Match whole line only (fgrep only)
  – -e expression Specify expression as option
  – -f filename       Take the regular expression (egrep) or
                      a list of strings (fgrep) from filename
grep Examples
   •   grep 'men' GrepMe
   •   grep 'fo*' GrepMe
   •   egrep 'fo+' GrepMe
   •   egrep -n '[Tt]he' GrepMe
   •   fgrep 'The' GrepMe
   •   egrep 'NC+[0-9]*A?' GrepMe
   •   fgrep -f expfile GrepMe
• Find all lines with signed numbers
       $ egrep ’[-+][0-9]+.?[0-9]*’ *.c
       bsearch. c: return -1;
       compile. c: strchr("+1-2*3", t-> op)[1] - ’0’, dst,
       convert. c: Print integers in a given base 2-16 (default 10)
       convert. c: sscanf( argv[ i+1], "% d", &base);
       strcmp. c: return -1;
       strcmp. c: return +1;
• egrep has its limits: For example, it cannot match all lines that
  contain a number divisible by 7.
Fun with the Dictionary
• /usr/dict/words contains about 25,000 words
   – egrep hh /usr/dict/words
      • beachhead
      • highhanded
      • withheld
      • withhold
• egrep as a simple spelling checker: Specify plausible
  alternatives you know
   egrep "n(ie|ei)ther" /usr/dict/words
   neither
• How many words have 3 a’s one letter apart?
   – egrep a.a.a /usr/dict/words | wc –l
      • 54
   – egrep u.u.u /usr/dict/words
      • cumulus
Other Notes
• Use /dev/null as an extra file name
  – Will print the name of the file that matched
      • grep test bigfile
         – This is a test.
      • grep test /dev/null bigfile
         – bigfile:This is a test.

• Return code of grep is useful
  –   grep fred filename > /dev/null && rm filename
This is one line of text                                                input line
              o.*o                                                          regular expression
   x        Ordinary characters match themselves

    xyz
            (NEWLINES and metacharacters excluded)
            Ordinary strings match themselves
                                                                 fgrep, grep, egrep
    m      Matches literal character m
     ^      Start of line
     $      End of line
      .     Any single character
 [xy^$x]    Any of x, y, ^, $, or z
[^xy^$z]    Any one character other than x, y, ^, $, or z        grep, egrep
   [a-z]    Any single character in given range
     r*     zero or more occurrences of regex r
   r1r2     Matches r1 followed by r2
  (r)     Tagged regular expression, matches r
   n       Set to what matched the nth tagged expression
            (n = 1-9)                                            grep
 {n,m}    Repetition
    r+      One or more occurrences of r
    r?      Zero or one occurrences of r
   r1|r2    Either r1 or r2
(r1|r2)r3
 (r1|r2)*
            Either r1r3 or r2r3
            Zero or more occurrences of r1|r2, e.g., r1, r1r1,   egrep
                                                                                Quick
                                                                               Reference
            r2r1, r1r1r2r1,…)
 {n,m}      Repetition

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Regular Expressions grep and egrep

  • 1. Regular Expressions grep and egrep
  • 2. Previously • Basic UNIX Commands – Files: rm, cp, mv, ls, ln – Processes: ps, kill • Unix Filters – cat, head, tail, tee, wc – cut, paste – find – sort, uniq – tr
  • 3. Subtleties of commands • Executing commands with find • Specification of columns in cut • Specification of columns in sort • Methods of input – Standard in – File name arguments – Special "-" filename • Options for uniq
  • 4. Today • Regular Expressions – Allow you to search for text in files – grep command • Stream manipulation: – sed
  • 6. What Is a Regular Expression? • A regular expression (regex) describes a set of possible input strings. • Regular expressions descend from a fundamental concept in Computer Science called finite automata theory • Regular expressions are endemic to Unix – vi, ed, sed, and emacs – awk, tcl, perl and Python – grep, egrep, fgrep – compilers
  • 7. Regular Expressions • The simplest regular expressions are a string of literal characters to match. • The string matches the regular expression if it contains the substring.
  • 8. regular expression c k s UNIX Tools rocks. match UNIX Tools sucks. match UNIX Tools is okay. no match
  • 9. Regular Expressions • A regular expression can match a string in more than one place. regular expression a p p l e Scrapple from the apple. match 1 match 2
  • 10. Regular Expressions • The . regular expression can be used to match any character. regular expression o . For me to poop on. match 1 match 2
  • 11. Character Classes • Character classes [] can be used to match any specific set of characters. regular expression b [eor] a t beat a brat on a boat match 1 match 2 match 3
  • 12. Negated Character Classes • Character classes can be negated with the [^] syntax. regular expression b [^eo] a t beat a brat on a boat match
  • 13. More About Character Classes – [aeiou] will match any of the characters a, e, i, o, or u – [kK]orn will match korn or Korn • Ranges can also be specified in character classes – [1-9] is the same as [123456789] – [abcde] is equivalent to [a-e] – You can also combine multiple ranges • [abcde123456789] is equivalent to [a-e1-9] – Note that the - character has a special meaning in a character class but only if it is used within a range, [-123] would match the characters -, 1, 2, or 3
  • 14. Named Character Classes • Commonly used character classes can be referred to by name (alpha, lower, upper, alnum, digit, punct, cntrl) • Syntax [:name:] – [a-zA-Z] [[:alpha:]] – [a-zA-Z0-9] [[:alnum:]] – [45a-z] [45[:lower:]] • Important for portability across languages
  • 15. Anchors • Anchors are used to match at the beginning or end of a line (or both). • ^ means beginning of the line • $ means end of the line
  • 16. regular expression ^ b [eor] a t beat a brat on a boat match regular expression b [eor] a t $ beat a brat on a boat match ^word$ ^$
  • 17. Repetition • The * is used to define zero or more occurrences of the single regular expression preceding it.
  • 18. regular expression y a * y I got mail, yaaaaaaaaaay! match regular expression o a * o For me to poop on. match .*
  • 19. Match length • A match will be the longest string that satisfies the regular expression. regular expression a . * e Scrapple from the apple. no no yes
  • 20. Repetition Ranges • Ranges can also be specified – { } notation can specify a range of repetitions for the immediately preceding regex – {n} means exactly n occurrences – {n,} means at least n occurrences – {n,m} means at least n occurrences but no more than m occurrences • Example: – .{0,} same as .* – a{2,} same as aaa*
  • 21. Subexpressions • If you want to group part of an expression so that * or { } applies to more than just the previous character, use ( ) notation • Subexpresssions are treated like a single character – a* matches 0 or more occurrences of a – abc* matches ab, abc, abcc, abccc, … – (abc)* matches abc, abcabc, abcabcabc, … – (abc){2,3} matches abcabc or abcabcabc
  • 22. grep • grep comes from the ed (Unix text editor) search command “global regular expression print” or g/re/p • This was such a useful command that it was written as a standalone utility • There are two other variants, egrep and fgrep that comprise the grep family • grep is the answer to the moments where you know you want the file that contains a specific phrase but you can’t remember its name
  • 23. Family Differences • grep - uses regular expressions for pattern matching • fgrep - file grep, does not use regular expressions, only matches fixed strings but can get search strings from a file • egrep - extended grep, uses a more powerful set of regular expressions but does not support backreferencing, generally the fastest member of the grep family • agrep – approximate grep; not standard
  • 24. Syntax • Regular expression concepts we have seen so far are common to grep and egrep. • grep and egrep have slightly different syntax – grep: BREs – egrep: EREs (enhanced features we will discuss) • Major syntax differences: – grep: ( and ), { and } – egrep: ( and ), { and }
  • 25. Protecting Regex Metacharacters • Since many of the special characters used in regexs also have special meaning to the shell, it’s a good idea to get in the habit of single quoting your regexs – This will protect any special characters from being operated on by the shell – If you habitually do it, you won’t have to worry about when it is necessary
  • 26. Escaping Special Characters • Even though we are single quoting our regexs so the shell won’t interpret the special characters, some characters are special to grep (eg * and .) • To get literal characters, we escape the character with a (backslash) • Suppose we want to search for the character sequence a*b* – Unless we do something special, this will match zero or more ‘a’s followed by zero or more ‘b’s, not what we want – a*b* will fix this - now the asterisks are treated as regular characters
  • 27. Egrep: Alternation • Regex also provides an alternation character | for matching one or another subexpression – (T|Fl)an will match ‘Tan’ or ‘Flan’ – ^(From|Subject): will match the From and Subject lines of a typical email message • It matches a beginning of line followed by either the characters ‘From’ or ‘Subject’ followed by a ‘:’ • Subexpressions are used to limit the scope of the alternation – At(ten|nine)tion then matches “Attention” or “Atninetion”, not “Atten” or “ninetion” as would happen without the parenthesis - Atten|ninetion
  • 28. Egrep: Repetition Shorthands • The * (star) has already been seen to specify zero or more occurrences of the immediately preceding character • + (plus) means “one or more”  abc+d will match ‘abcd’, ‘abccd’, or ‘abccccccd’ but will not match ‘abd’  Equivalent to {1,}
  • 29. Egrep: Repetition Shorthands cont • The ‘?’ (question mark) specifies an optional character, the single character that immediately precedes it  July? will match ‘Jul’ or ‘July’  Equivalent to {0,1}  Also equivalent to (Jul|July) • The *, ?, and + are known as quantifiers because they specify the quantity of a match • Quantifiers can also be used with subexpressions – (a*c)+ will match ‘c’, ‘ac’, ‘aac’ or ‘aacaacac’ but will not match ‘a’ or a blank line
  • 30. Grep: Backreferences • Sometimes it is handy to be able to refer to a match that was made earlier in a regex • This is done using backreferences – n is the backreference specifier, where n is a number • Looks for nth subexpression • For example, to find if the first word of a line is the same as the last: – ^([[:alpha:]]{1,}) .* 1$ – The ([[:alpha:]]{1,}) matches 1 or more letters
  • 31. Practical Regex Examples • Variable names in C – [a-zA-Z_][a-zA-Z_0-9]* • Dollar amount with optional cents – $[0-9]+(.[0-9][0-9])? • Time of day – (1[012]|[1-9]):[0-5][0-9] (am|pm) • HTML headers <h1> <H1> <h2> … – <[hH][1-4]>
  • 32. grep Family • Syntax grep [-hilnv] [-e expression] [filename] egrep [-hilnv] [-e expression] [-f filename] [expression] [filename] fgrep [-hilnxv] [-e string] [-f filename] [string] [filename] – -h Do not display filenames – -i Ignore case – -l List only filenames containing matching lines – -n Precede each matching line with its line number – -v Negate matches – -x Match whole line only (fgrep only) – -e expression Specify expression as option – -f filename Take the regular expression (egrep) or a list of strings (fgrep) from filename
  • 33. grep Examples • grep 'men' GrepMe • grep 'fo*' GrepMe • egrep 'fo+' GrepMe • egrep -n '[Tt]he' GrepMe • fgrep 'The' GrepMe • egrep 'NC+[0-9]*A?' GrepMe • fgrep -f expfile GrepMe • Find all lines with signed numbers $ egrep ’[-+][0-9]+.?[0-9]*’ *.c bsearch. c: return -1; compile. c: strchr("+1-2*3", t-> op)[1] - ’0’, dst, convert. c: Print integers in a given base 2-16 (default 10) convert. c: sscanf( argv[ i+1], "% d", &base); strcmp. c: return -1; strcmp. c: return +1; • egrep has its limits: For example, it cannot match all lines that contain a number divisible by 7.
  • 34. Fun with the Dictionary • /usr/dict/words contains about 25,000 words – egrep hh /usr/dict/words • beachhead • highhanded • withheld • withhold • egrep as a simple spelling checker: Specify plausible alternatives you know egrep "n(ie|ei)ther" /usr/dict/words neither • How many words have 3 a’s one letter apart? – egrep a.a.a /usr/dict/words | wc –l • 54 – egrep u.u.u /usr/dict/words • cumulus
  • 35. Other Notes • Use /dev/null as an extra file name – Will print the name of the file that matched • grep test bigfile – This is a test. • grep test /dev/null bigfile – bigfile:This is a test. • Return code of grep is useful – grep fred filename > /dev/null && rm filename
  • 36. This is one line of text input line o.*o regular expression x Ordinary characters match themselves xyz (NEWLINES and metacharacters excluded) Ordinary strings match themselves fgrep, grep, egrep m Matches literal character m ^ Start of line $ End of line . Any single character [xy^$x] Any of x, y, ^, $, or z [^xy^$z] Any one character other than x, y, ^, $, or z grep, egrep [a-z] Any single character in given range r* zero or more occurrences of regex r r1r2 Matches r1 followed by r2 (r) Tagged regular expression, matches r n Set to what matched the nth tagged expression (n = 1-9) grep {n,m} Repetition r+ One or more occurrences of r r? Zero or one occurrences of r r1|r2 Either r1 or r2 (r1|r2)r3 (r1|r2)* Either r1r3 or r2r3 Zero or more occurrences of r1|r2, e.g., r1, r1r1, egrep Quick Reference r2r1, r1r1r2r1,…) {n,m} Repetition