The document is very short and does not provide much context. It contains only one word: "Real". From this limited information, it is difficult to construct an informative summary in 3 sentences or less.
In this deck from the HPC User Forum at Argonne, Doug Kothe from the Exascale Computing Project presents an ECP update.
"The Exascale Computing Project (ECP) is focused on accelerating the delivery of a capable exascale computing ecosystem that delivers 50 times more computational science and data analytic application power than possible with DOE HPC systems such as Titan (ORNL) and Sequoia (LLNL). With the goal to launch a US exascale ecosystem by 2021, the ECP will have profound effects on the American people and the world."
Watch the video: https://wp.me/p3RLHQ-kPG
Learn more: https://exascaleproject.org
and
http://hpcuserforum.com
Sign up for our insideHPC Newsletter: http://insidehpc.com/newsletter
Paul Messina presented this deck at the HPC User Forum in Austin. "The Exascale Computing Project (ECP) is a collaborative effort of two US Department of Energy (DOE) organizations – the Office of Science (DOE-SC) and the National Nuclear Security Administration (NNSA). As part of President Obama’s National Strategic Computing initiative, ECP was established to develop a new class of high-performance computing systems whose power will be a thousand times more powerful than today’s petaflop machines. ECP’s work encompasses applications, system software, hardware technologies and architectures, and workforce development to meet the scientific and national security mission needs of DOE."
Watch the video presentation: http://wp.me/p3RLHQ-fIC
Learn more: http://insidehpc.com/ecp
In this deck from the HPC User Forum at Argonne, Doug Kothe from the Exascale Computing Project presents an ECP update.
"The Exascale Computing Project (ECP) is focused on accelerating the delivery of a capable exascale computing ecosystem that delivers 50 times more computational science and data analytic application power than possible with DOE HPC systems such as Titan (ORNL) and Sequoia (LLNL). With the goal to launch a US exascale ecosystem by 2021, the ECP will have profound effects on the American people and the world."
Watch the video: https://wp.me/p3RLHQ-kPG
Learn more: https://exascaleproject.org
and
http://hpcuserforum.com
Sign up for our insideHPC Newsletter: http://insidehpc.com/newsletter
Paul Messina presented this deck at the HPC User Forum in Austin. "The Exascale Computing Project (ECP) is a collaborative effort of two US Department of Energy (DOE) organizations – the Office of Science (DOE-SC) and the National Nuclear Security Administration (NNSA). As part of President Obama’s National Strategic Computing initiative, ECP was established to develop a new class of high-performance computing systems whose power will be a thousand times more powerful than today’s petaflop machines. ECP’s work encompasses applications, system software, hardware technologies and architectures, and workforce development to meet the scientific and national security mission needs of DOE."
Watch the video presentation: http://wp.me/p3RLHQ-fIC
Learn more: http://insidehpc.com/ecp
Carles Bo, d'ICIQ, presenta IoChem-BD, un repositori de dades en química computacional. L'objectiu és elaborar una base de dades de forma normalitzada, definint processos, què es guarda i com es fa.
Aquesta presentació ha tingut lloc a la TSIUC'14, celebrada a la Universitat Autònoma de Barcelona el passat 2 de desembre de 2014, sota el títol "Reptes en Big Data a la universitat i la Recerca".
Avogadro: Open Source Libraries and Application for Computational ChemistryMarcus Hanwell
In order to tackle upcoming molecular simulation and visualization challenges in key areas of materials science, chemistry and biology it is necessary to move beyond fixed software applications. The Avogadro project is in the final stages of an ambitious rewrite of its core data structures, algorithms and visualization capabilities. The project began as a grass roots effort to address deficiencies observed by many of the early contributors in existing commercial and open source solutions. Avogadro is now a robust, flexible solution that can tie in to and harness the power of VTK for additional analysis and visualization capabilities.
OpenACC and Open Hackathons Monthly Highlights June 2022.pdfOpenACC
Stay up-to-date with the OpenACC and Open Hackathons Monthly Highlights. June’s edition covers the 2022 OpenACC and Hackathons Summit, NSF’s Traineeship Program, NVIDIA’s Academic Hardware Grant program, upcoming Open Hackathons and Bootcamps, recent research, new resources, and more!
On 29 January 2020 ARCHIVER launched its Request for Tender with the purpose to award several Framework Agreements and work orders for the provision of R&D for hybrid end-to-end archival and preservation services that meet the innovation challenges of European Research communities, in the context of the European Open Science Cloud.
The tender was closed on 28 April 2020 and 15 R&D bids were submitted, with consortia that included 43 companies and organisations. The best bids have been selected and will start the first phase of the ARCHIVER R&D (Solution Design) in June 2020.
On Monday 8 June the selected consortia for the ARCHIVER design phase have been announced during a Public Award Ceremony starting at 14.00 CEST.
In light of the COVID-19 outbreak and the and consequent movement restrictions imposed in several countries, the event has been organised as a webinar, virtually hosted by Port d’Informació Científica (PIC), a member of the Buyers Group of the ARCHIVER consortium.
The Kick-off marks the beginning of the Solution Design Phase.
The content of this poster was presented during a poster session at the American Council on Education's 95th Annual Meeting, where the MGHPCC received an award. THe meeting was held at the Omni Shoreham in Washington, DC, March 2-5, 2013.
Stay up-to-date on the latest news, events and resources for the OpenACC community. This month’s highlights covers the newly elected OpenACC.org vice president, 2019 OpenACC Annual Meeting, GPU Bootcamp at RIKEN R-CCS, a complete schedule of GPU hackathons and more!
Stay up-to-date on the latest news, events and resources for the OpenACC community. This month’s highlights covers the newly released PGI 19.7, the upcoming 2019 OpenACC Annual Meeting, GPU Bootcamp at RIKEN R-CCS, a complete schedule of GPU hackathons and more!
Nanometric Modelization of Gas Structure, Multidimensional using COMSOL Soft...IJECEIAES
In structures with GaAs, which are the structures most used, because of their physical and electronic proprieties, nevertheless seems a compromise between the increase of doping and reduced mobility. The use of quantum hetero structures can overcome this limitation by creating a 2D carrier gas. Using the COMSOL software this work present three models: the first model computes the electronic states for the heterojunction AlGaAs/GaAs in 1D dimension, the second model computes the electronic states for the heterojunction AlGaAs/GaAs but in 2D dimension (nanowire) and the third model we permitted the study of this hetero junction (steep) wich inevitably involves the resolution of the system of equations Schrödinger-Poisson due to quantum effects that occur at the interface. The validity of this model can be effectuated with a comparison of our results with the result of different models developed in the literature of the related work, from this point of view the validity of our model is confirmed.
French industrial quantum use cases: EDF
Stéphane TANGUY - CIO & CTO at EDF Labs, EDF, France
Quantum computing main use cases at EDF: material ageing modelling, safety probabilistic study and combinatorial optimization for energy management. Explore the EDF quantum journey to address them.
Congresso Sociedade Brasileira de Computação CSBC2016 Porto Alegre (Brazil)
Workshop on Cloud Networks & Cloudscape Brazil
Philippe O.A. Navaux, Professor at the Federal University of Rio Grande do Sul and Computer Science Area Director of CAPES, Brazil
Funded jointly by the European Commission (EC) and the Ministry of Science, Technology and Innovation; Portuguese: Ministério da Ciência, Tecnologia e Inovação (MCTI) of Brazil, the EUBrasilCloudFORUM project supports EU-BR collaborative projects in the collection and promotion of their results and activities. The results will be used to draft a research Roadmap on cloud computing, identifying collaboration needs and opportunities between Europe and Brazil for the European Commission and to MCTI, thus contributing to the definition of future cooperation priorities between the two regions.
Hokkaido University (HU) - Seoul National University (SNU) Joint Symposium
2018 International Workshop on
New Frontiers in Convergence Science and Technology
ARM-based Supercomputer from Fujitsu and RIKEN - "Post-K"Phil Hughes
RIKEN's presentation from recent International Supercomputer Conference - #ISC16. A closer look at their next-generation "Post-K" supercomputer based on #ARM and Fujitsu #HPC SoC
Carles Bo, d'ICIQ, presenta IoChem-BD, un repositori de dades en química computacional. L'objectiu és elaborar una base de dades de forma normalitzada, definint processos, què es guarda i com es fa.
Aquesta presentació ha tingut lloc a la TSIUC'14, celebrada a la Universitat Autònoma de Barcelona el passat 2 de desembre de 2014, sota el títol "Reptes en Big Data a la universitat i la Recerca".
Avogadro: Open Source Libraries and Application for Computational ChemistryMarcus Hanwell
In order to tackle upcoming molecular simulation and visualization challenges in key areas of materials science, chemistry and biology it is necessary to move beyond fixed software applications. The Avogadro project is in the final stages of an ambitious rewrite of its core data structures, algorithms and visualization capabilities. The project began as a grass roots effort to address deficiencies observed by many of the early contributors in existing commercial and open source solutions. Avogadro is now a robust, flexible solution that can tie in to and harness the power of VTK for additional analysis and visualization capabilities.
OpenACC and Open Hackathons Monthly Highlights June 2022.pdfOpenACC
Stay up-to-date with the OpenACC and Open Hackathons Monthly Highlights. June’s edition covers the 2022 OpenACC and Hackathons Summit, NSF’s Traineeship Program, NVIDIA’s Academic Hardware Grant program, upcoming Open Hackathons and Bootcamps, recent research, new resources, and more!
On 29 January 2020 ARCHIVER launched its Request for Tender with the purpose to award several Framework Agreements and work orders for the provision of R&D for hybrid end-to-end archival and preservation services that meet the innovation challenges of European Research communities, in the context of the European Open Science Cloud.
The tender was closed on 28 April 2020 and 15 R&D bids were submitted, with consortia that included 43 companies and organisations. The best bids have been selected and will start the first phase of the ARCHIVER R&D (Solution Design) in June 2020.
On Monday 8 June the selected consortia for the ARCHIVER design phase have been announced during a Public Award Ceremony starting at 14.00 CEST.
In light of the COVID-19 outbreak and the and consequent movement restrictions imposed in several countries, the event has been organised as a webinar, virtually hosted by Port d’Informació Científica (PIC), a member of the Buyers Group of the ARCHIVER consortium.
The Kick-off marks the beginning of the Solution Design Phase.
The content of this poster was presented during a poster session at the American Council on Education's 95th Annual Meeting, where the MGHPCC received an award. THe meeting was held at the Omni Shoreham in Washington, DC, March 2-5, 2013.
Stay up-to-date on the latest news, events and resources for the OpenACC community. This month’s highlights covers the newly elected OpenACC.org vice president, 2019 OpenACC Annual Meeting, GPU Bootcamp at RIKEN R-CCS, a complete schedule of GPU hackathons and more!
Stay up-to-date on the latest news, events and resources for the OpenACC community. This month’s highlights covers the newly released PGI 19.7, the upcoming 2019 OpenACC Annual Meeting, GPU Bootcamp at RIKEN R-CCS, a complete schedule of GPU hackathons and more!
Nanometric Modelization of Gas Structure, Multidimensional using COMSOL Soft...IJECEIAES
In structures with GaAs, which are the structures most used, because of their physical and electronic proprieties, nevertheless seems a compromise between the increase of doping and reduced mobility. The use of quantum hetero structures can overcome this limitation by creating a 2D carrier gas. Using the COMSOL software this work present three models: the first model computes the electronic states for the heterojunction AlGaAs/GaAs in 1D dimension, the second model computes the electronic states for the heterojunction AlGaAs/GaAs but in 2D dimension (nanowire) and the third model we permitted the study of this hetero junction (steep) wich inevitably involves the resolution of the system of equations Schrödinger-Poisson due to quantum effects that occur at the interface. The validity of this model can be effectuated with a comparison of our results with the result of different models developed in the literature of the related work, from this point of view the validity of our model is confirmed.
French industrial quantum use cases: EDF
Stéphane TANGUY - CIO & CTO at EDF Labs, EDF, France
Quantum computing main use cases at EDF: material ageing modelling, safety probabilistic study and combinatorial optimization for energy management. Explore the EDF quantum journey to address them.
Congresso Sociedade Brasileira de Computação CSBC2016 Porto Alegre (Brazil)
Workshop on Cloud Networks & Cloudscape Brazil
Philippe O.A. Navaux, Professor at the Federal University of Rio Grande do Sul and Computer Science Area Director of CAPES, Brazil
Funded jointly by the European Commission (EC) and the Ministry of Science, Technology and Innovation; Portuguese: Ministério da Ciência, Tecnologia e Inovação (MCTI) of Brazil, the EUBrasilCloudFORUM project supports EU-BR collaborative projects in the collection and promotion of their results and activities. The results will be used to draft a research Roadmap on cloud computing, identifying collaboration needs and opportunities between Europe and Brazil for the European Commission and to MCTI, thus contributing to the definition of future cooperation priorities between the two regions.
Hokkaido University (HU) - Seoul National University (SNU) Joint Symposium
2018 International Workshop on
New Frontiers in Convergence Science and Technology
ARM-based Supercomputer from Fujitsu and RIKEN - "Post-K"Phil Hughes
RIKEN's presentation from recent International Supercomputer Conference - #ISC16. A closer look at their next-generation "Post-K" supercomputer based on #ARM and Fujitsu #HPC SoC
Similar to Realization of Innovative Light Energy Conversion Materials utilizing the Supercomputer Fugaku (20)
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Comparative structure of adrenal gland in vertebrates
Realization of Innovative Light Energy Conversion Materials utilizing the Supercomputer Fugaku
1. Realization of Innovative Light Energy
Conversion Materials utilizing the
Supercomputer Fugaku
the 4th R-CCS International Symposium
7 February 2022 15:00–15:20JST
RIKEN Center for Computational Science, Kobe, Japan
Takahito Nakajima
2. The challenge issues towards the effective use
of “Fugaku” were selected and their target
software programs were developed as part of
the FS2020 project (MEXT, FY2014–2019).
FS2020 included 9 priority issues and 4
exploratory challenges selected from various
research fields.
Issue 5: Development of new fundamental
technologies for highly-efficient energy creation,
conversion, storage and use (Leader: Prof. Okazaki)
There were 3 research branches driving the research
activities toward the goal:
Creation and storage of alternative energy resources -
Solar cells and artificial photosynthesis
Conversion and storage of energy - Fuel cells and
rechargeable batteries
Effective use of energy and material resources -
Methane, CO2, and efficient catalysts
FLAGSHIP 2020 Project
3. In Issue 5, four application programs were selected as infrastructure programs that effectively
utilize “Fugaku” to contribute solutions to renewable energy problems.
Application Software in Issue 5
Applications Functionalities Performance on “K”
1 NTChem
Nakajima group
General-purpose quantum chemistry software
Ground and excited state calculations for 10,000
atom systems
World’s largest level of parallel QC computations
360 atoms, 9,840 atomic orbitals
80,199 nodes, 34% parallel efficiency
2 GELLAN
Tenno group
Hierarchical quantum chemistry software
Highly-accurate excited state calculations with
more than 1020
electron configurations
World's highest level of accurate QC calculations
120 atoms, 5,520 atomic orbitals
21,672 nodes, 32% parallel efficiency
3 MODYLAS
Okazaki group
General-purpose classical MD software
Large-scale MD simulations for billion-atom
systems
One of the fastest MD simulations in the world
80 million atoms
65,536 nodes, 41% parallel efficiency
4 stat-CPMD
Tateyama group
First-principles MD software
Reaction free energy calculation for 5,000 atom
systems
Efficient and reliable chemical reaction simulations
2,400 atomic systems
3,840 nodes, 29% parallel efficiency
4. NTChem is a high-performance software package for molecular electronic
structure calculations for general purpose on various supercomputers and
workstations, and is a useful tool in various computational studies for large
and complicated molecular systems.
NTChem is a community-based software package. We intend to continue
adopting users’ requests with the aim of making the program more
convenient and user-friendly for researchers in various research fields.
User cases
・Toyobo ・Mitsubishi Chem. ・RIKEN ・Hokkaido U. ・U. Tokyo ・Kyoto U. ・Kobe U. ・Yokohama-
City U. ・Gifu U. ・JAEA ・Open to the public on K and SC centers (IMS, FOCUS, Nagoya U., Kyusyu
U., Tokyo Tech.)
http://www.r-ccs.riken.jp/software_center/software/ntchem/
NTChem
5. NTChem is designed to carry out high performance calculations on computers
with tens of thousands of nodes for DFT, TDDFT, MP2, and QMC.
The good parallel scaling was achieved with our new algorithm on “K” and “Fugaku”.
Elapsed time was 11 mins using 80,199 nodes of “K” for nanographene (C150H30)2. The
world’s largest wavefunction-based electron-correlation calculation (Left Figure)
By using the same MP2 algorithm on “K”, we can predict, with high accuracy, the
property known as the heat of formation of large fullerenes. Our finding suggests that
new interesting properties that show the character of both fullerenes and graphenes
appear if much larger fullerenes are synthesized. (Right Figure)
Parallel Computing with NTChem
Calculated heats of formation per carbon (kJ mol–1)
0
17822
35644
53466
71288
0 17822 35644 53466 71288
Speedups
Ideal
3.5 PFLOPS
(34 %efficiency)
6. NTChem on Fugaku
We are currently developing a new version of “NTChem”. It adopts a memory-
distributed sparse-matrix algorithm based on “NTPoly” to overcome available
memory sizes per a compute node. It also adopts an algorithm with regular
communication patterns that map to high dimensional torus network architectures to
manage significant irregular data movement.
We hope that NTChem will realize ab initio QC calculations for large molecules
including 1M atoms on “Fugaku” because the new version is capable of calculating
molecules with 10K atoms on “K” in the current stage.
In future, we will perform novel computational applications for realistic molecular
systems such as whole photosystem II (1.2M atoms) on “Fugaku”.
Old
New
11,682atoms
7. The successor to the priority issues in FS2020 is a “Program for Promoting
Research on the Supercomputer Fugaku” (MEXT, FY2020–2022, FY2021–2025).
The project includes the four focus areas:
Future development and challenges to general human issues
Strengthening the strategies to protect the lives and assets of citizens
Strengthening the competitiveness of industry
Research foundation
with 22 selected projects.
Program for Promoting Researches on Fugaku
8. to realize the social implementation of innovative light energy conversion materials by utilizing
massive materials simulations and informatics on “Fugaku”
Realization of Innovative Light Energy Conversion Materials utilizing the
Supercomputer Fugaku in Program for Promoting Research on Fugaku
Leader: Takahito Nakajima (RIKEN)
Objectives
Realization of Innovative
Photocatalyst for Hydrogen
Production
Kobe U・NAIST
Countermeasures against
Infectious Diseases by Virus
Inactivation
Kobe U・Kyoto U
Novel Materials Design for High
Efficiency Lead-Free Perovskite
Solar Cells
RIKEN・Kyoto U・ENEOS
Expected Achievements
Realization of hydrogen-generating photocatalysts with the world’s highest conversion efficiency of
over 10% in collaboration with industries
Social implementation of photocatalysts that inactivate infectious viruses and generate hydrogen
peroxide for disinfection selectively and efficiently
Realization of Pb-free perovskite solar cells with a conversion efficiency of >30% surpassing Si-based
cells
9. We plan to realize accelerating the discovery of novel materials such as
photovoltaics, photocatalysts, polymer batteries, and advanced biopolymers
by establishing novel materials informatics techniques that assimilate large
databases and mathematics in materials science with high-throughput
simulations on “Fugaku”.
We also have several plans to collaborate with experimental groups and
industries to discover new materials that are highly efficient, low-cost,
environmentally clean, and sustainable. We would like to realize novel
material designs by co-designing experiments, theorizing, simulations, and
informatics.
Materials Informatics on Fugaku
10. Perovskite Solar Cells
Perovskites with small organic molecules are one of the promising new-
generation solar cells, which are expected to generate renewable resources
and resolve global energy problems. The perovskite solar cells achieve the
power conversion efficiency of beyond 25% (25.5%, 2021.10.11).
The most prominent perovskite in photovoltaic applications is a type of
perovskite containing toxic Pb such as MAPbI3 and FAPbI3.
11. To search for novel Pb-free perovskite solar cells containing non-toxic and
widely available metals, we performed a systematic high-throughput first-
principles simulation on the K computer for 11,025 compositions of
perovskites in ABX3 and A2BB’X6 forms, where A is an organic or inorganic
component, B/B’ is a metal atom, and X is a halogen atom.
By applying a screening procedure to all the computed compounds, we
discovered novel candidates for environmentally friendly Pb-free perovskite
solar cells and proposed 51 low-toxic halide perovskites, most of which are
proposed newly in our work.
Materials Design for PSCs
The potential candidates are
categorized as only 6 types based
on the combination of groups to
which two metal elements (at B-
and Bʹ-sites) belong in the periodic
table; group 14–14, group 13–15,
group 11–11, group 9–13, group
11–13, group 11–15.
Press release: http://www.riken.jp/pr/press/2017/20171005_1/
12. Our Fugaku Promoting Research Project
We plan to perform more massive high-throughput simulations for a huge
number of compounds totaling more than 10 million, employing a
comprehensive combination of elements with a higher degree of freedom
than our previous research to build a large-scale materials database for PSCs.
We will propose candidates for Pb-free PSCs through efficient search with
screening and demonstrate novel materials by providing the results to the
cooperative experimental groups and the related companies.
The feature is to design novel materials not only by simulations but also by
materials informatics. We will construct a prediction model to estimate
conversion efficiency and stability through machine learning based on the
materials database to propose candidates for highly efficient and stable Pb-
free PSCs.
13. Hole-Transport Materials for PSCs
Spiro-OMeTAD is the most frequently used hole-transport material (HTM) for PSCs.
PSCs with spiro-OMeTAD yield the high PCE. For example, the PCE of
(FAPbI3)0.92(MAPbBr3)0.08 with spiro-OMeTAD is 23.4% [Yoo et al. (2019)].
To improve the PCE, the derivatives of spiro-OMeTAD are implemented. For example,
the PCE of FAPbI3 with spiro-mF is 24.82% [Jeong et al. (2020)].
However, spiro-OMeTAD and its derivative are prohibitively expensive ($274/g for
spiro-OMeTAD) because of their multistep synthesis and low yields. Cheaper HTMs
have been found with comparably high PCEs (X60: $120/g 19.6%, Py-C: $192/g 12.4%,
etc), but cost-effective materials with high PCE of over 20% are yet scarce.
Recently, we discovered novel candidates for HTMs of PSCs which can be alternatives
with high PCE to spiro-OMeTAD by using materials informatics and simulations.
spiro-OMeTAD, SAscore: 3.95 spiro-mF, Sascore: 4.40
14. Data collection
We collected experimental data for PCEs of PSCs: 88 perovskites with VBM and CBM,
326 HTMs, 10 ETMs with CBM, 10 dopants, 28 co-dopants, and 50 active areas. The
total number of datasets is 712.
Preparation of candidate molecules and fragments
Every HTM in the database was decomposed to 3 fragments. The new compositions
for HTMs were built by combining 3 fragments selected from the prepared fragment
sets.
Materials Design of Novel HTMs
Database
・Perovskites with VBM and CBM
・HTMs ・ETMs with CBM
・Dopants ・Co-dopants
・Active areas
15. Molecular descriptors
The topological and geometrical molecular descriptors for each fragment were
calculated by Mordred.
The quantum-chemical electronic descriptors for each fragment were evaluated by
NTChem: HOMO, LUMO, total energies, electronic energies, heats of formation,
dispersion energies, and dipole moments.
Materials Design of Novel HTMs
Spiro-OMeTAD:
COC1=CC=C(C=C1)N(C2=CC=C(C=C2)OC)C3=CC4=C(C=C3)C5=C(C46C7=C(C=CC
(=C7)N(C8=CC=C(C=C8)OC)C9=CC=C(C=C9)OC)C1=C6C=C(C=C1)N(C1=CC=C(C=
C1)OC)C1=CC=C(C=C1)OC)C=C(C=C5)N(C1=CC=C(C=C1)OC)C1=CC=C(C=C1)OC
・HOMO ・LUMO
・Total energy
・Electronic energy
・Heat of formation
・Dispersion energy
・Dipole moment
16. Prediction of candidates for HTMs
To predict a HTM with the highest PCE, we adopted a prediction scheme with the
Gaussian process regression (GPR) model (Bayesian optimization), which improves
uncertainty and predictability by considering the error variance of prediction values.
To construct this GPR model, the classical and quantum molecular descriptors are
provided as inputs. PCEs with the error variance are predicted as outputs from the
GPR model.
Materials Design of Novel HTMs
Bayesian optimization
CM/QM descriptors are provided
as inputs. PCEs with the error
variance are predicted as outputs.
17. Selection of candidates for HTMs
To obtain the optimal set of fragments which compose a candidate molecule, the
acquisition function, obtained from the GPR model, was optimized by particle swarm
optimization (PSO). PSO was used to tackle the optimization problem in the vast
chemical space, where the number of all compositions is over 90,000,000 in this study.
The suitable experiment conditions for the fixed active area (0.2 cm2 in this study)
were also simultaneously determined from among the combinations of collected
experimental data.
Materials Design of Novel HTMs
GPR + PSO
Search for HTM with highest PCE.
Optimization of the improvement
function is done by PSO.
18. Virtual experiments
We performed a virtual experiment in our approach. In this step, we adopted the
different prediction model rather than the GPR model. That is, PCEs of HTMs
proposed by the GPR model were determined by the deep neural network (DNN)
model.
The prediction value obtained from the DNN model was added as the input for the
GPR model. As a result, both GPR and DNN models were reconstructed by repeating
the prediction and the virtual experiment so that the most likely HTM was selected by
the improved model in every step.
Materials Design of Novel HTMs
DNN
Search for HTM with highest PCE.
Optimization of the improvement
function is done by PSO.
Virtual experiment
GPR + PSO
PCEs of HTMs proposed
by GPR are determined
by DNN.
19. Construction of the DNN model
For the construction of the DNN model, similar to the construction of the GPR model,
the classical and quantum molecular descriptors and the experimental conditions are
provided as inputs, and PCEs are predicted as outputs.
To construct the accurate DNN model, 3 different prediction models (partial least
squares regression, support vector machine, k-nearest neighbors) were prebuilt and
their prediction values for PCEs were added to the inputs for the DNN model.
Materials Design of Novel HTMs
DNN
PCEs of HTMs proposed
by GPR are determined
by DNN.
20. Materials-Informatics-Driven Design of HTMs
We carried out 20 independent virtual experiments with 100 updates per run.
We have identified 2 novel candidates for HTMs of PSCs that yield high PCEs and are
considered to be easier to synthesize than spiro-OMeTAD (SAscore: 3.95).
Proposed candidates for HTMs
24.4%, SAscore: 3.74 24.0%, SAscore: 3.48
21. Acknowledgements
This work was supported by MEXT as “Program for Promoting Researches on
the Supercomputer Fugaku” (Realization of innovative light energy
conversion materials utilizing the supercomputer Fugaku, Grant Number
JPMXP1020210317).
This work was supported by FOCUS Establishing Supercomputing Center of
Excellence.
This work was supported by Cabinet Office, Government of Japan, Cross-
ministerial Strategic Innovation Promotion Program (SIP), “Technologies for
Smart Bio-industry and Agriculture” (funding agency: Bio-oriented
Technology Research Advancement Institution, NARO).