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Nucleic Acids
DNA & RNA
What are they ?
The 4th type of biomolecule
The chemical link between
generations
The source of genetic
information in chromosomes
What do they do ?
Dictate amino-acid
sequence in proteins
Give information to
chromosomes, which is then
passed from parent to
offspring
What are they made of ?
 Simple units called nucleotides,
connected in long chains
 Nucleotides have 3 parts:
1- 5-Carbon sugar (pentose)
2- Nitrogen containing base
(made of C, H and N)
3- A phosphate group ( P )
 The P groups make the links that
unite the sugars (hence a “sugar-
phosphate backbone”
Two types of Nucleotides
(depending on the sugar they
contain)
1- Ribonucleic acids (RNA)
The pentose sugar is Ribose
(has a hydroxyl group in the 3rd
carbon---OH)
2- Deoxyribonucleic acids (DNA)
The pentose sugar is
Deoxyribose (has just an
hydrogen in the same place---
H) Deoxy = “minus oxygen”
DNA Nucleotides
Composition (3 parts):
1- Deoxyribose sugar (no O in 3rd
carbon)
2- Phosphate group
3- One of 4 types of bases (all
containing nitrogen):
- Adenine
- Thymine (Only in DNA)
- Cytosine
- Guanine
RNA Nucleotides
Composition ( 3 parts):
1- Ribose sugar (with O in 3rd
carbon)
2- Phosphate group
3- One of 4 types of bases (all
containing nitrogen):
- Adenine
- Uracyl (only in RNA)
- Cytosine
- Guanine
DNA vs RNA
 DNA
1- Deoxyribose sugar
2- Bases: Adenine, Thymine, Cytosine,
Guanine
3- Double-stranded helix arrangement
 RNA
1- Ribose sugar
2- Bases: Adenine, Uracyl, Cytosine,
Guanine
4- Single stranded
The Double Helix (DNA)
Structural model:
 Model proposed by Watson & Crick, 1953
 Two sugar-phosphate strands, next to each
other, but running in opposite directions.
 Specific Hydrogen bonds occur among bases
from one chain to the other:
A---T , C---G
Due to this specificity, a certain base on
one strand indicates a certain base in the
other.
 The 2 strands intertwine, forming a double-
helix that winds around a central axis
How DNA Works
1- DNA stores genetic information in
segments called genes
2- The DNA code is in Triplet Codons
(short sequences of 3 nucleotides
each)
3- Certain codons are translated by
the cell into certain Amino
acids.
4. Thus, the sequence of nucleotides in
DNA indicate a sequence of Amino
acids in a protein.
11
Properties of Water
Covalent bonding
Polar covalent bond – unequal sharing of
electrons
A great example of a molecule with polar
covalent bonds is water. Why is water
considered polar?
What is a partial positive and partial
negative charge?
Properties of Water
Covalent bonding vs. Hydrogen bonding
Covalent Bond
Hydrogen Bond
Properties of Water
Water is the solvent of Life!
Solute – substance dissolved in a
solvent to form a solution
Solvent – fluid that dissolves solutes
Example: Ice Tea – water is the
solvent and tea and sugar the solutes
Universal Solvent
Properties of Water
cohesion = water attracted to other water
molecules because of polar properties
adhesion = water attracted to other materials
surface tension = water is pulled together creating
the smallest surface area possible
Cohesion, Adhesion and Surface Tension
Properties of Water
Capillary Action
Because water has both
adhesive and cohesive
properties, capillary action is
present.
Capillary Action = water’s adhesive property is the cause
of capillary action. Water is attracted to some other
material and then through cohesion, other water
molecules move too as a result of the original adhesion.
Ex: Think water in a straw
Ex: Water moves through trees this way
Properties of Water
In order to raise the temperature of
water, the average molecular speed
has to increase.
It takes much more energy to raise
the temperature of water compared to
other solvents because hydrogen
bonds hold the water molecules
together!
Water has a high heat capacity.
“The specific heat is the amount of
heat per unit mass required to raise
the temperature by one degree
Celsius.”
High Heat Capacity
Properties of Water
Density
Water is less dense as a solid! This is because the
hydrogen bonds are stable in ice – each molecule of
water is bound to four of its neighbors.
Solid – water molecules
are bonded together –
space between fixed
Liquid – water molecules
are constantly bonding
and rebonding – space is
always changing
Properties of Water
So, can you name all of the properties of water?
Adhesion
Cohesion
Capillary action
High surface tension
Holds heat to regulate temperature (High heat capacity)
Less dense as a solid than a liquid
Acids and Bases
Strength compared using pH scale
Ranges from 0 – 14
Logarithmic Scale (gets 10x bigger/smaller)
Acid – donates H+ when added to aqueous solutions
Ranges from pH 0-6.9
Base – breaks up into hydroxide (OH-) ions and
another compound when placed in an aqueous
solution
Ranges from pH 7.1 – 14
Distilled water is pH 7.0 or neutral. Why?
H2O H+ + OH-
Acids and Bases
Buffers – compounds used to maintain a
contant pH within a system
H2CO3 H+ + HCO3
-
Carbonic acid bicarbonate ion
Acids and Bases
Making Biological Molecules
Condensation Reaction
Hydrolysis Reaction
and H2O
H2O

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nucleic_acids-1_and_water.ppt

  • 2. What are they ? The 4th type of biomolecule The chemical link between generations The source of genetic information in chromosomes
  • 3. What do they do ? Dictate amino-acid sequence in proteins Give information to chromosomes, which is then passed from parent to offspring
  • 4. What are they made of ?  Simple units called nucleotides, connected in long chains  Nucleotides have 3 parts: 1- 5-Carbon sugar (pentose) 2- Nitrogen containing base (made of C, H and N) 3- A phosphate group ( P )  The P groups make the links that unite the sugars (hence a “sugar- phosphate backbone”
  • 5. Two types of Nucleotides (depending on the sugar they contain) 1- Ribonucleic acids (RNA) The pentose sugar is Ribose (has a hydroxyl group in the 3rd carbon---OH) 2- Deoxyribonucleic acids (DNA) The pentose sugar is Deoxyribose (has just an hydrogen in the same place--- H) Deoxy = “minus oxygen”
  • 6. DNA Nucleotides Composition (3 parts): 1- Deoxyribose sugar (no O in 3rd carbon) 2- Phosphate group 3- One of 4 types of bases (all containing nitrogen): - Adenine - Thymine (Only in DNA) - Cytosine - Guanine
  • 7. RNA Nucleotides Composition ( 3 parts): 1- Ribose sugar (with O in 3rd carbon) 2- Phosphate group 3- One of 4 types of bases (all containing nitrogen): - Adenine - Uracyl (only in RNA) - Cytosine - Guanine
  • 8. DNA vs RNA  DNA 1- Deoxyribose sugar 2- Bases: Adenine, Thymine, Cytosine, Guanine 3- Double-stranded helix arrangement  RNA 1- Ribose sugar 2- Bases: Adenine, Uracyl, Cytosine, Guanine 4- Single stranded
  • 9. The Double Helix (DNA) Structural model:  Model proposed by Watson & Crick, 1953  Two sugar-phosphate strands, next to each other, but running in opposite directions.  Specific Hydrogen bonds occur among bases from one chain to the other: A---T , C---G Due to this specificity, a certain base on one strand indicates a certain base in the other.  The 2 strands intertwine, forming a double- helix that winds around a central axis
  • 10. How DNA Works 1- DNA stores genetic information in segments called genes 2- The DNA code is in Triplet Codons (short sequences of 3 nucleotides each) 3- Certain codons are translated by the cell into certain Amino acids. 4. Thus, the sequence of nucleotides in DNA indicate a sequence of Amino acids in a protein.
  • 11. 11
  • 12. Properties of Water Covalent bonding Polar covalent bond – unequal sharing of electrons A great example of a molecule with polar covalent bonds is water. Why is water considered polar? What is a partial positive and partial negative charge?
  • 13. Properties of Water Covalent bonding vs. Hydrogen bonding Covalent Bond Hydrogen Bond
  • 14. Properties of Water Water is the solvent of Life! Solute – substance dissolved in a solvent to form a solution Solvent – fluid that dissolves solutes Example: Ice Tea – water is the solvent and tea and sugar the solutes Universal Solvent
  • 15. Properties of Water cohesion = water attracted to other water molecules because of polar properties adhesion = water attracted to other materials surface tension = water is pulled together creating the smallest surface area possible Cohesion, Adhesion and Surface Tension
  • 16. Properties of Water Capillary Action Because water has both adhesive and cohesive properties, capillary action is present. Capillary Action = water’s adhesive property is the cause of capillary action. Water is attracted to some other material and then through cohesion, other water molecules move too as a result of the original adhesion. Ex: Think water in a straw Ex: Water moves through trees this way
  • 17. Properties of Water In order to raise the temperature of water, the average molecular speed has to increase. It takes much more energy to raise the temperature of water compared to other solvents because hydrogen bonds hold the water molecules together! Water has a high heat capacity. “The specific heat is the amount of heat per unit mass required to raise the temperature by one degree Celsius.” High Heat Capacity
  • 18. Properties of Water Density Water is less dense as a solid! This is because the hydrogen bonds are stable in ice – each molecule of water is bound to four of its neighbors. Solid – water molecules are bonded together – space between fixed Liquid – water molecules are constantly bonding and rebonding – space is always changing
  • 19. Properties of Water So, can you name all of the properties of water? Adhesion Cohesion Capillary action High surface tension Holds heat to regulate temperature (High heat capacity) Less dense as a solid than a liquid
  • 20. Acids and Bases Strength compared using pH scale Ranges from 0 – 14 Logarithmic Scale (gets 10x bigger/smaller) Acid – donates H+ when added to aqueous solutions Ranges from pH 0-6.9 Base – breaks up into hydroxide (OH-) ions and another compound when placed in an aqueous solution Ranges from pH 7.1 – 14 Distilled water is pH 7.0 or neutral. Why? H2O H+ + OH-
  • 21.
  • 22. Acids and Bases Buffers – compounds used to maintain a contant pH within a system H2CO3 H+ + HCO3 - Carbonic acid bicarbonate ion
  • 24. Making Biological Molecules Condensation Reaction Hydrolysis Reaction and H2O H2O