Inductively Coupled Plasma
Mass Spectrometry ((ICP-MS)
Mass Spectrometry
• Mass spectrometry (MS) is similar to NMR in that it has historically been of great value in
structure elucidation of relatively small organic & biomolecules.
• MS analysis of proteins & other biopolymers was initially hindered because analytes are
usually measured in the gas phase.
• The development of new methods now makes it possible to study large molecules i.e.
sample preparation (ionization)
multiquadrupole analysis
tandem MS instruments
powerful computers
Ionization and Analysis of Proteins
• Mass spectrometer generally consists of three components (figure 7.17).
ionization device
mass analyzer
ion detector
• Neutral molecules are ionized, & their positively charged ion products are directed through an
electric and/or magnetic field, and separated on the basis of mass-to-charge ratio (m/z).
• A detector then records the ions after separation.
• The “spectrum” generated by MS displays ion intensity as a function of m/z.
multiquadrupole
analysis
Continue……..
• Ionization of small organic & biological molecules is done by electron impact while
nonvolatile & biological macromolecules requires special treatment.
• In the late 1980s, “soft ionization” method was introduced for the macromolecules.
• Electrospray ionization (ESI) involve spray of sample’s solution via a metal needle or
capillary tip held at a potential (+ 5000 V) that results in tiny droplets (+ve ions)
• Solvent evaporates, and ions are directed into the analyzer for separation.
• Pulses from N2 laser used to ionize proteins from surface (soft laser desorption; SLD)
• Both ESI & SLD are liquid-phase processes hence require purified samples
Electrospray ionization (ESI)
• Laser desorption has been modified to a solid phase method, matrix-assisted laser
desorption ionization (MALDI), widely used technique for protein analysis.
• In MALDI, sample is placed in matrix of small organic molecules & irradiated by laser pulse.
• Matrices absorb laser energy, causing ionization of macromolecular sample.
• Several types of mass analyzers are used for ion separation, including time-of-flight (TOF),
quadrupoles, and ion traps.
• The TOF-MS is most widely used technique in which each ion produced has same initial
kinetic energy, but speed varies with mass.
• Mass is determined by measurement of an ion’s time-of-flight to detector.
Continue……..
time-of-flight (TOF)
MS Applications in Biochemistry
• MS, becoming a standard tool in the analysis of biological molecules and biological
processes i.e.
• Identification of peptides & proteins
Identification of proteins is widely done by MS.
important ions resulting from the removal of an electron by ionization procedures are
+ ve charged molecular ions (m+) or protonated molecular ions (m+nh)n-1.
measurement of molecular mass provides the molecular weight of original molecule.
the accuracy of this method for molecular weight determination is about 0.01%.
some molecular ions are unstable & disintegrate to produce fragment ions.
these fragmentation processes are useful in structural elucidation of smaller molecules.
• One MS method for peptide identification is called peptide mass fingerprinting.
unknown sample is digested with trypsin to produce fragments & analyzed by MALDI-MS.
resulting spectrum displays the masses of peptide fragments.
used as a “fingerprint” of sample & compared with known fragmented patterns in a
sequence database.
Continue……..
• Characterization of post-translational modification processes
after translation, proteins are often modified by covalent attachment of specific functional
groups like
Phosphorylation
Glycosylation
these chemical modifications can easily be detected by MS
Continue……..
• Peptide Sequencing
small peptides & proteins may be sequenced by MS procedures.
the peptide sample is ionized & fragmented at the peptide bonds by collision-induced
dissociation.
size analysis of the series of fragments produced leads to the sequence of amino acids.
Continue……..
• Protein-protein interactions
most important goal of proteomics is to study how proteins interact with each other.
ESI-MS and MALDI-TOF are currently being used to investigate how proteins associate
to form biologically active multi subunit complexes.
Continue……..
ICP-MS
• The inductively coupled plasma (ICP) & the quadrupole mass analyzer caused an increase
in the use of atomic MS as an analytical tool.
• ICP-MS permits determination of most of elements at very-low-concentration levels.
• It has great advantages over other techniques for elemental analysis as it used to
determine most elements at high sensitivity & at a wide range of concentrations.
• Moreover, isotope ratios can be obtained, providing geochemical & geochronological
information.
• There are several properties of MS as an analyzer & the argon ICP as an ionization
source make ICP-MS an attractive combination.
• The ICP has a high ionization efficiency & it produces mainly singly charged +ve ions.
• Hence, mass spectra are very simple & elements are easily identified and the isotope
ratios can be easily measured.
• Moreover, the mass spectrometer is very sensitive, with detection limits up to three
orders of magnitude better than ICP-OES.
• And is linear over a wide dynamic range of up to five orders of magnitude.
• Table 10.21 presents some aspects of ICP-OES & MS that complement each other.
Continue……..
• The instrument is an ICP interfaced with a quadrupole MS as shown in figure 10.36a.
• This ICP source is horizontal, with argon plasma concentric to the mass spectrometer
inlet.
• Figure 10.36b shows the layout of a new ICP-MS, the Perkinelmer nexion 300, with the
plasma vertical to the mass spectrometer.
• This instrument has a quadrupole ion deflector (QID) above the torch.
• The QID turns positively charged ions from the plasma 90° to the left, into the mass
analyzer, while nonionized material flows straight up & out of the system.
Instrumentation
• While the instrument has a QID & a quadrupole reaction cell, it has only one analyzing
quadrupole
• ICPS operate at atmospheric pressure & at a temperature of about 10,000 k.
• While, the MS requires a high vacuum (10−4–10−6 torr) & operates at room
temperature.
• Most ICP-MS systems have an interface similar to the one shown in figure 10.37, but the
nexion 300 shown in figure 10.36b has three cones.
• In figure 10.37, the argon ICP plasma is on the right side of the diagram.
• Ions from the plasma enter into mass spectrometer through a two-stage interface.
Continue……..
• Plasma is centered on sampler cone, & ions & plasma gas pass through the orifice in
the cone into a vacuum-pumped region.
• Most of argon gas is pumped away in this region.
• The remaining ions pass through the skimmer cone into the mass spectrometer.
• The design of this cone restricts the flow of ions into the mass spectrometer to the
central part of the flow initially coming from plasma.
• Region behind the skimmer cone is evacuated to a pressure of about 10−4 torr by a
turbomolecular pump.
• This region can be isolated from the higher pressure of the interface region by a gate
valve
Continue……..
• This permits the sampler & skimmer cones to be removed for cleaning without breaking
the vacuum in mass spectrometer.
• Both sampler & skimmer cones are made of either nickel or platinum & are water cooled
by contact with water flowing within the interface chamber.
• The hyper skimmer cone in the perkinelmer instrument is designed to focus the ions
even more tightly, with the aim of increasing stability & eliminating drift.
• Series of ion-focusing elements similar to those developed for double-focusing mass
spectrometers have been utilized to introduce the ions into the quadrupole.
Continue……..
• Interference effects due to the presence of large numbers of photons reaching detector
are eliminated by photon stops in older designs or off-axis ion lenses in newer one
• Background signals have been largely eliminated in modern ICP-MS instruments.
• Other mass analyzers are used with ICP ionization source, including high-resolution
magnetic sectors & TOFS.
• ICP-TOF mass analyzer systems as well as other designs have advantage of
simultaneous measurement of ions.
• Simultaneous measurement is critical for accurate determination of isotope abundances
as well as for accurate quantitative work using isotope dilution.
Continue……..
Applications of Atomic MS
• ICP-MS is particularly useful for rapid multi element determination of metals &
nonmetals at concentrations of ppq, ppt, and ppb.
• Only unit mass (low) resolution is required to discriminate between different elements,
as isotopes of different elements differ by 1 unit mass.
• There are only a few isotopic overlaps between elements, so one can usually find an
isotope to measure for any given element.
• The applications discussed are from many forms of atomic MS, including ICP-MS,
GDMS, and coupled chromatography-ICP-MS.
• Uses for ICP-MS include analysis of
environmental samples for ppb levels of trace metals & nonmetals.
body fluids for elemental toxins such as lead & arsenic
trace elements in geological samples, metals & alloys, & isotope ratios
Analysis of ceramics, semiconductors, pharmaceutical, forensic & cosmetic samples
Determination of platinum group catalysts in polymers, elemental analysis in petroleum
& chemical industries
Metal determinations in clinical chemistry & food chemistry.
Applications of ICP-MS
• Most common samples analyzed by ICP-MS are aqueous solutions.
• Sample is dissolved in acid, digested or fused in molten salt, & then diluted to desired
volume with water.
• All reagents must be of extremely high purity, given the sensitivity of the ICP-MS
• Aqueous solution is introduced into plasma using a peristaltic pump, nebulizer, & spray
chamber system.
• Solid samples can be analyzed by laser ablation ICP-MS or by coupling an electrothermal
vaporization (ETV) or electrothermal atomizer (ETA) to the ICP-MS.
Analysis of Sample
• Solids can also be analyzed by GDMS and spark source MS.
• Laser ablation ICP-MS can measure elements in fluid inclusions in rocks, microscopic
features in heterogeneous materials, & individual crystals in samples like granite.
• It can be used for analysis of artworks & jewelry.
• Quantitative analysis by ICP-MS is usually done with external calibration standards &
the addition of internal standards to all standards & samples.
• For determination of large number of elements, it is usual to add Li, Y, In, Tb, and Bi &
measure the ions 6Li, 89Y, 115In, 159Tb, and 209Bi as internal standards.
Continue……..
• Internal standard that is most closely matched in first ionization potential to the analyte is
generally used.
• Results obtained using this approach are generally very accurate & precise.
• Table 10.23 presents typical spike recovery & precision data for ICP-MS determination
of 25 elements in a certified reference material (crm) “trace elements in drinking water”
from high-purity standards, Charleston, SC
Continue……..
Recommended book
Biochemistry Laboratory: Modern Theory and Techniques
Rodney Boyer (Hope College)
Second Edition
Chapter 7: Spectroscopic Analysis of Biomolecules (D.
Mass Spectrometry)
Undergraduate Instrumental Analysis
James W. Robinson (7th Edition)
Chapter 10: Mass Spectrometry II: Spectral Interpretation and
Applications (10.4.1 ICP-MS)
Mass Spectrometry in chemistry and basic sciences.pptx
Mass Spectrometry in chemistry and basic sciences.pptx

Mass Spectrometry in chemistry and basic sciences.pptx

  • 1.
    Inductively Coupled Plasma MassSpectrometry ((ICP-MS)
  • 2.
    Mass Spectrometry • Massspectrometry (MS) is similar to NMR in that it has historically been of great value in structure elucidation of relatively small organic & biomolecules. • MS analysis of proteins & other biopolymers was initially hindered because analytes are usually measured in the gas phase. • The development of new methods now makes it possible to study large molecules i.e. sample preparation (ionization) multiquadrupole analysis tandem MS instruments powerful computers
  • 3.
    Ionization and Analysisof Proteins • Mass spectrometer generally consists of three components (figure 7.17). ionization device mass analyzer ion detector • Neutral molecules are ionized, & their positively charged ion products are directed through an electric and/or magnetic field, and separated on the basis of mass-to-charge ratio (m/z). • A detector then records the ions after separation. • The “spectrum” generated by MS displays ion intensity as a function of m/z.
  • 8.
  • 11.
    Continue…….. • Ionization ofsmall organic & biological molecules is done by electron impact while nonvolatile & biological macromolecules requires special treatment. • In the late 1980s, “soft ionization” method was introduced for the macromolecules. • Electrospray ionization (ESI) involve spray of sample’s solution via a metal needle or capillary tip held at a potential (+ 5000 V) that results in tiny droplets (+ve ions) • Solvent evaporates, and ions are directed into the analyzer for separation. • Pulses from N2 laser used to ionize proteins from surface (soft laser desorption; SLD) • Both ESI & SLD are liquid-phase processes hence require purified samples
  • 12.
  • 13.
    • Laser desorptionhas been modified to a solid phase method, matrix-assisted laser desorption ionization (MALDI), widely used technique for protein analysis. • In MALDI, sample is placed in matrix of small organic molecules & irradiated by laser pulse. • Matrices absorb laser energy, causing ionization of macromolecular sample. • Several types of mass analyzers are used for ion separation, including time-of-flight (TOF), quadrupoles, and ion traps. • The TOF-MS is most widely used technique in which each ion produced has same initial kinetic energy, but speed varies with mass. • Mass is determined by measurement of an ion’s time-of-flight to detector. Continue……..
  • 14.
  • 15.
    MS Applications inBiochemistry • MS, becoming a standard tool in the analysis of biological molecules and biological processes i.e. • Identification of peptides & proteins Identification of proteins is widely done by MS. important ions resulting from the removal of an electron by ionization procedures are + ve charged molecular ions (m+) or protonated molecular ions (m+nh)n-1. measurement of molecular mass provides the molecular weight of original molecule. the accuracy of this method for molecular weight determination is about 0.01%.
  • 16.
    some molecular ionsare unstable & disintegrate to produce fragment ions. these fragmentation processes are useful in structural elucidation of smaller molecules. • One MS method for peptide identification is called peptide mass fingerprinting. unknown sample is digested with trypsin to produce fragments & analyzed by MALDI-MS. resulting spectrum displays the masses of peptide fragments. used as a “fingerprint” of sample & compared with known fragmented patterns in a sequence database. Continue……..
  • 17.
    • Characterization ofpost-translational modification processes after translation, proteins are often modified by covalent attachment of specific functional groups like Phosphorylation Glycosylation these chemical modifications can easily be detected by MS Continue……..
  • 18.
    • Peptide Sequencing smallpeptides & proteins may be sequenced by MS procedures. the peptide sample is ionized & fragmented at the peptide bonds by collision-induced dissociation. size analysis of the series of fragments produced leads to the sequence of amino acids. Continue……..
  • 19.
    • Protein-protein interactions mostimportant goal of proteomics is to study how proteins interact with each other. ESI-MS and MALDI-TOF are currently being used to investigate how proteins associate to form biologically active multi subunit complexes. Continue……..
  • 20.
    ICP-MS • The inductivelycoupled plasma (ICP) & the quadrupole mass analyzer caused an increase in the use of atomic MS as an analytical tool. • ICP-MS permits determination of most of elements at very-low-concentration levels. • It has great advantages over other techniques for elemental analysis as it used to determine most elements at high sensitivity & at a wide range of concentrations. • Moreover, isotope ratios can be obtained, providing geochemical & geochronological information.
  • 21.
    • There areseveral properties of MS as an analyzer & the argon ICP as an ionization source make ICP-MS an attractive combination. • The ICP has a high ionization efficiency & it produces mainly singly charged +ve ions. • Hence, mass spectra are very simple & elements are easily identified and the isotope ratios can be easily measured. • Moreover, the mass spectrometer is very sensitive, with detection limits up to three orders of magnitude better than ICP-OES. • And is linear over a wide dynamic range of up to five orders of magnitude. • Table 10.21 presents some aspects of ICP-OES & MS that complement each other. Continue……..
  • 23.
    • The instrumentis an ICP interfaced with a quadrupole MS as shown in figure 10.36a. • This ICP source is horizontal, with argon plasma concentric to the mass spectrometer inlet. • Figure 10.36b shows the layout of a new ICP-MS, the Perkinelmer nexion 300, with the plasma vertical to the mass spectrometer. • This instrument has a quadrupole ion deflector (QID) above the torch. • The QID turns positively charged ions from the plasma 90° to the left, into the mass analyzer, while nonionized material flows straight up & out of the system. Instrumentation
  • 25.
    • While theinstrument has a QID & a quadrupole reaction cell, it has only one analyzing quadrupole • ICPS operate at atmospheric pressure & at a temperature of about 10,000 k. • While, the MS requires a high vacuum (10−4–10−6 torr) & operates at room temperature. • Most ICP-MS systems have an interface similar to the one shown in figure 10.37, but the nexion 300 shown in figure 10.36b has three cones. • In figure 10.37, the argon ICP plasma is on the right side of the diagram. • Ions from the plasma enter into mass spectrometer through a two-stage interface. Continue……..
  • 27.
    • Plasma iscentered on sampler cone, & ions & plasma gas pass through the orifice in the cone into a vacuum-pumped region. • Most of argon gas is pumped away in this region. • The remaining ions pass through the skimmer cone into the mass spectrometer. • The design of this cone restricts the flow of ions into the mass spectrometer to the central part of the flow initially coming from plasma. • Region behind the skimmer cone is evacuated to a pressure of about 10−4 torr by a turbomolecular pump. • This region can be isolated from the higher pressure of the interface region by a gate valve Continue……..
  • 28.
    • This permitsthe sampler & skimmer cones to be removed for cleaning without breaking the vacuum in mass spectrometer. • Both sampler & skimmer cones are made of either nickel or platinum & are water cooled by contact with water flowing within the interface chamber. • The hyper skimmer cone in the perkinelmer instrument is designed to focus the ions even more tightly, with the aim of increasing stability & eliminating drift. • Series of ion-focusing elements similar to those developed for double-focusing mass spectrometers have been utilized to introduce the ions into the quadrupole. Continue……..
  • 29.
    • Interference effectsdue to the presence of large numbers of photons reaching detector are eliminated by photon stops in older designs or off-axis ion lenses in newer one • Background signals have been largely eliminated in modern ICP-MS instruments. • Other mass analyzers are used with ICP ionization source, including high-resolution magnetic sectors & TOFS. • ICP-TOF mass analyzer systems as well as other designs have advantage of simultaneous measurement of ions. • Simultaneous measurement is critical for accurate determination of isotope abundances as well as for accurate quantitative work using isotope dilution. Continue……..
  • 30.
    Applications of AtomicMS • ICP-MS is particularly useful for rapid multi element determination of metals & nonmetals at concentrations of ppq, ppt, and ppb. • Only unit mass (low) resolution is required to discriminate between different elements, as isotopes of different elements differ by 1 unit mass. • There are only a few isotopic overlaps between elements, so one can usually find an isotope to measure for any given element. • The applications discussed are from many forms of atomic MS, including ICP-MS, GDMS, and coupled chromatography-ICP-MS.
  • 31.
    • Uses forICP-MS include analysis of environmental samples for ppb levels of trace metals & nonmetals. body fluids for elemental toxins such as lead & arsenic trace elements in geological samples, metals & alloys, & isotope ratios Analysis of ceramics, semiconductors, pharmaceutical, forensic & cosmetic samples Determination of platinum group catalysts in polymers, elemental analysis in petroleum & chemical industries Metal determinations in clinical chemistry & food chemistry. Applications of ICP-MS
  • 32.
    • Most commonsamples analyzed by ICP-MS are aqueous solutions. • Sample is dissolved in acid, digested or fused in molten salt, & then diluted to desired volume with water. • All reagents must be of extremely high purity, given the sensitivity of the ICP-MS • Aqueous solution is introduced into plasma using a peristaltic pump, nebulizer, & spray chamber system. • Solid samples can be analyzed by laser ablation ICP-MS or by coupling an electrothermal vaporization (ETV) or electrothermal atomizer (ETA) to the ICP-MS. Analysis of Sample
  • 33.
    • Solids canalso be analyzed by GDMS and spark source MS. • Laser ablation ICP-MS can measure elements in fluid inclusions in rocks, microscopic features in heterogeneous materials, & individual crystals in samples like granite. • It can be used for analysis of artworks & jewelry. • Quantitative analysis by ICP-MS is usually done with external calibration standards & the addition of internal standards to all standards & samples. • For determination of large number of elements, it is usual to add Li, Y, In, Tb, and Bi & measure the ions 6Li, 89Y, 115In, 159Tb, and 209Bi as internal standards. Continue……..
  • 34.
    • Internal standardthat is most closely matched in first ionization potential to the analyte is generally used. • Results obtained using this approach are generally very accurate & precise. • Table 10.23 presents typical spike recovery & precision data for ICP-MS determination of 25 elements in a certified reference material (crm) “trace elements in drinking water” from high-purity standards, Charleston, SC Continue……..
  • 36.
    Recommended book Biochemistry Laboratory:Modern Theory and Techniques Rodney Boyer (Hope College) Second Edition Chapter 7: Spectroscopic Analysis of Biomolecules (D. Mass Spectrometry) Undergraduate Instrumental Analysis James W. Robinson (7th Edition) Chapter 10: Mass Spectrometry II: Spectral Interpretation and Applications (10.4.1 ICP-MS)