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GCP - TL1 : common bean
Past:
• Diversity study of reference collection
– G. Makunde
• Markers: disease, pest
• QTL for Drought
– ambiguous
– Repeating with a second population
Current
• 2 MARS populations
– Mexico
– Ethiopia / Colombia
– Phenotyping and genotyping on-going
• SNP platform with USDA-Beltsville
– ~1500 SNP
– Conversion from Ilumina to Kaspar
– Applying to 94 parentals from Colombia, 150 from
Africa
– Expanding on new chip with 6000 SNP
SOON
• Reference sequence from USDA
– Mapped SNP
– Disease resistance markers – to be mapped
– Convert selection from gel based to SNP
system
– Recognize relevant genes in close proximity?
Parallel actions
• “Establish” COP
– October 17-20, Malawi
– Building on African network
• PABRA: Pan African Bean Research Alliance
– Cooperation with US community
• BIC: Bean Improvement Cooperative
• Pursue IBP
– Ontology near done
– English > Spanish
– French pending
– Visit of Alberto Guerrero to CIMMYT ?

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GRM2011: Improving bean productivity in Africa

  • 1. GCP - TL1 : common bean
  • 2. Past: • Diversity study of reference collection – G. Makunde • Markers: disease, pest • QTL for Drought – ambiguous – Repeating with a second population
  • 3. Current • 2 MARS populations – Mexico – Ethiopia / Colombia – Phenotyping and genotyping on-going • SNP platform with USDA-Beltsville – ~1500 SNP – Conversion from Ilumina to Kaspar – Applying to 94 parentals from Colombia, 150 from Africa – Expanding on new chip with 6000 SNP
  • 4. SOON • Reference sequence from USDA – Mapped SNP – Disease resistance markers – to be mapped – Convert selection from gel based to SNP system – Recognize relevant genes in close proximity?
  • 5. Parallel actions • “Establish” COP – October 17-20, Malawi – Building on African network • PABRA: Pan African Bean Research Alliance – Cooperation with US community • BIC: Bean Improvement Cooperative • Pursue IBP – Ontology near done – English > Spanish – French pending – Visit of Alberto Guerrero to CIMMYT ?