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Pinkeye Project
Jin Wai Goh
Xiaojun Sun
Aloysius Davin Oetomo
Scott Simmons
2
Background
• Pinkeye is caused by bacteria and viruses
• Current diagnosis methods are slow and require training
• Our design has these factors in mind:
– Deliver results in less than 24 hours
– Require minimal training
– Simple/inexpensive to manufacture
– Long shelf life
3
System Layout
4
Sample Collection
• Allow ~10 teardrops (~50 µL) to fall into a syringe
• Place syringe into syringe pump
• Connect syringe pump to the PinkeyeDetect device via PTFE tube
• Pump at a rate of 30 µL/hr
5
Simulation of Bacteria Separation
〈FDEP〉=πa3εmRe{K}∇|Erms|2
Frequency of the electric field 1000[kHz]
"Fluid medium conductivity" 0.12 [S/m]
"Fluid relative permittivity" 78
"Fluid density" 1000[kg/m^3]
"Fluid dynamic viscosity" 1e-3[Pa*s]
"Particle density (RBCs and bacteria)" 1050[kg/m^3]
"Particle diameter: bacteria (gram-positive)" 1.8[um]
"Particle diameter: RBCs" 8 [um]
"Particle conductivity: bacteria (gram-positive)" 0.25[S/m]
"Particle conductivity: RBCs" 0.31[S/m]
"Particle relative permittivity: bacteria (gram-positive)" 20
"Particle relative permittivity: RBCs" 59
"Shell electrical conductivity: bacteria (gram-
positive)" 1e-6[S/m]
"Shell electrical conductivity: RBCs" 1e-6[S/m]
"Shell relative permittivity: bacteria (gram-positive)" 6
"Shell relative permittivity: RBCs" 4.44
"Shell thickness: bacteria (gram-positive)" 4[nm]
"Shell thickness: RBCs" 9[nm]
6
Electric Field and Velocity Profile
7
Cell Trajectory
8
Cell Culture Chamber
• Effective culture time  Determine culture volume
 Depends on Co, substrate uptake rate, substrate diffusivity,
cell density, culture area + volume
𝑫𝒂 =
𝑲𝒎 × 𝒉 × 𝝈
𝑫 × 𝑪 𝒐
• Fabricated through replica molding and photolithography.
• PDMS was used because:
 Non-toxic
 Gas permeable
 Excellent optical properties (low autofluorescence &
transparency)
• Bacteria inflow ~ 1.2X106 μm/s (require ~ 3X culture medium)
 Total volume ~ 4.8X106 μm/s
 179μm x 179μm x 150μm (L x W x h)
9
Mueller Hinton Broth (MHB)
• 0.3g/mL beef extract
• 0.0175 g/mL casamino acid
• 0.0015 g/mL starch
• Non-selective (grow all bacteria present equally)
• Starch absorbs toxins released from bacteria so it doesn’t interfere
with antibiotic testing
• Loose agar  better diffusion
10
TWIST Valves
• Designed by Weibel et al.
• Stainless steel screws bonded to PDMS channel
• Elastic modulus PDMS (2.4 mPa; 360 psi)
 Filling compartments produces pressure that later drives inflow/outflow of fluids.
 Hand-operated, cheap, seals chamber indefinitely.
11
Antibiotic Sensitivity Testing
• Based on SBM method
• Concentration gradient generated through mixing channels (low fluid
resistance) that are sandwiched between resistance adjustment
channels (high fluid resistance)
• Freeze-dried antibiotic matrix
• MIC determination in 3 hr

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Lab-on-Chip Diagnosis of Bacterial vs Viral Conjunctivitis

  • 1. Pinkeye Project Jin Wai Goh Xiaojun Sun Aloysius Davin Oetomo Scott Simmons
  • 2. 2 Background • Pinkeye is caused by bacteria and viruses • Current diagnosis methods are slow and require training • Our design has these factors in mind: – Deliver results in less than 24 hours – Require minimal training – Simple/inexpensive to manufacture – Long shelf life
  • 4. 4 Sample Collection • Allow ~10 teardrops (~50 µL) to fall into a syringe • Place syringe into syringe pump • Connect syringe pump to the PinkeyeDetect device via PTFE tube • Pump at a rate of 30 µL/hr
  • 5. 5 Simulation of Bacteria Separation 〈FDEP〉=πa3εmRe{K}∇|Erms|2 Frequency of the electric field 1000[kHz] "Fluid medium conductivity" 0.12 [S/m] "Fluid relative permittivity" 78 "Fluid density" 1000[kg/m^3] "Fluid dynamic viscosity" 1e-3[Pa*s] "Particle density (RBCs and bacteria)" 1050[kg/m^3] "Particle diameter: bacteria (gram-positive)" 1.8[um] "Particle diameter: RBCs" 8 [um] "Particle conductivity: bacteria (gram-positive)" 0.25[S/m] "Particle conductivity: RBCs" 0.31[S/m] "Particle relative permittivity: bacteria (gram-positive)" 20 "Particle relative permittivity: RBCs" 59 "Shell electrical conductivity: bacteria (gram- positive)" 1e-6[S/m] "Shell electrical conductivity: RBCs" 1e-6[S/m] "Shell relative permittivity: bacteria (gram-positive)" 6 "Shell relative permittivity: RBCs" 4.44 "Shell thickness: bacteria (gram-positive)" 4[nm] "Shell thickness: RBCs" 9[nm]
  • 6. 6 Electric Field and Velocity Profile
  • 8. 8 Cell Culture Chamber • Effective culture time  Determine culture volume  Depends on Co, substrate uptake rate, substrate diffusivity, cell density, culture area + volume 𝑫𝒂 = 𝑲𝒎 × 𝒉 × 𝝈 𝑫 × 𝑪 𝒐 • Fabricated through replica molding and photolithography. • PDMS was used because:  Non-toxic  Gas permeable  Excellent optical properties (low autofluorescence & transparency) • Bacteria inflow ~ 1.2X106 μm/s (require ~ 3X culture medium)  Total volume ~ 4.8X106 μm/s  179μm x 179μm x 150μm (L x W x h)
  • 9. 9 Mueller Hinton Broth (MHB) • 0.3g/mL beef extract • 0.0175 g/mL casamino acid • 0.0015 g/mL starch • Non-selective (grow all bacteria present equally) • Starch absorbs toxins released from bacteria so it doesn’t interfere with antibiotic testing • Loose agar  better diffusion
  • 10. 10 TWIST Valves • Designed by Weibel et al. • Stainless steel screws bonded to PDMS channel • Elastic modulus PDMS (2.4 mPa; 360 psi)  Filling compartments produces pressure that later drives inflow/outflow of fluids.  Hand-operated, cheap, seals chamber indefinitely.
  • 11. 11 Antibiotic Sensitivity Testing • Based on SBM method • Concentration gradient generated through mixing channels (low fluid resistance) that are sandwiched between resistance adjustment channels (high fluid resistance) • Freeze-dried antibiotic matrix • MIC determination in 3 hr