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Grassland Mowing Events Detection
25/10/2022
Vassilis Sitokonstantinou, Mariza Kaskara, Iason Tsardanidis,
Thanassis Drivas, Alexandros Marantos, Alkis Koukos, Haris Kontoes
AgriHUB | Agriculture, Ecosystems and Environment Group
National Observatory of Athens
Institute for Astronomy, Astrophysics, Space Applications & Remote Sensing
BEYOND Center, Athens, Greece
Datacube in practice
3 Full-Year Datacube datasets of Sentinel-1
and Sentinel-2 images for both Cyprus and
Lithuania from 2020
• Storage of various dataset, from Sentinel
missions to LPIS
• Allow scalable continent scale processing of
the stored data
• Creation of various feature spaces from the
same data; Pixel-based, object-based, path-
based
• Cloud Masking and Indices calculation
• Parcels Indexing and Rasterization
• Buffering
• Photo-interpretation
• Analytics and Summary Aggregated
Statistics
• Fast and Easy subset extraction
• Pixel-wise Time-series preprocessing
• Etc.
Datacube in practice
Clouds and Small parcels
The ever present problems
Damn it’s cloudy!!!
▪ Employ validated fusion algorithms on Sentinel-1 and
Sentinel-2 data to overcome cloud coverage
Damn that parcel is small!!!
▪ Pixel-based approaches and advanced AI algorithms can
partly solve the problem
▪ Improved and more sophisticated routine exploiting the
results and the confidence intervals provided
• Reconstruction of NDVI based on S1 data (Cloud Coverage)
• Mowing events identification based on the new artificially created NDVI
• Mowing compliance results according national regulations
Grasslands Mowing Events Detection
Grassland Monitoring for the Common
Agricultural Policy (CAP)
Extensive Cloud Coverage and S1-S2 Fusion
Deep Learning for Event Detection
Quantification of the Grassland Use Intensity
and CAP monitoring
Remarks & Future work
Deep Learning for fusion of Sentinel-
1 and Sentinel-2 data and grassland
mowing detection
Grassland Monitoring for the Common
Agriculture Policy (CAP)
• Grasslands provide a wide range of ecosystem services (e.g. fodder for live
stocking animals, wildlife habitats, carbon storage, soil erosion protection etc.)
• The Common Agricultural Policy (CAP) requires the systematic and timely
remote monitoring of Agricultural Lands and Grasslands
• Pillar I of CAP - The detection of grassland mowing events at the parcel-level
has been identified as a key data product to assess the compliance with respect
several CAP measures, including the crop diversification and permanent
grassland areas maintenance
• Most countries also define national regulations such as a reference date or
period for the mowing of permanent grasslands, as well as grazing events,
boundaries elements, mowing date or mowing within an agronomic year (e.g.
Spain, Italy)
• Pillar II of CAP - Conceptual Design of targeted agro-ecological and climate-
focused measures (CAP post-2020)
Study Area
The study was conducted in the country of Lithuania (April-October 2020)
* Based on Climatic Regioning of Lithuania 2013
(Lithuanian Hydrometeorological Service under the
Ministry of Environmentof Lithuania)
Sentinel-2 Data
The study was conducted in the country of Lithuania (April-October 2020)
Sample parcels (area > 0.5 hectares) are taken from 6 different regions of
Lithuania
Spatial Resolution: 10m x 10m
Sentinel-2 L2A
• Normalized Difference Vegetation Index (NDVI)
• Scene Classification (SCL) based on sen2cor L2A processor
Sentinel-1 Data
• Sentinel-1 GRD (rel. orbits: 58, 131) → Backscattering coefficients (VV-VH)
• Sentinel-1 Coherence (rel. orbits: 58, 131) →Coherence coefficients (VV-VH)
Spatial Resolution: 20m x 20m
Rel.orbit 131 Rel.orbit 58
Cloud Masking
Other Masks:
• MAJA
• Fmask
• s2cloudless
Common Temporal System of Reference
Sparsity due to Cloud Coverage and Artificial Masking
Dense Time-series
Artificial Masking on Dense Time-series
DENSE NDVI (TEMP. RESAMPLED)
MASK
Why not Temporal Interpolation?
• What when we have large gaps ?
• What when we have steep drops ?
Sentinel-1/Sentinel-2 Fusion Model
Sentinel-1/Sentinel-2 Fusion
Sentinel-1/Sentinel-2 Fusion Results
Sentinel-1/Sentinel-2 Fusion Results
Sentinel-1/Sentinel-2 Fusion Results
NDVI drops (𝑁𝐷𝑉𝐼𝑑𝑖𝑓𝑓 ≤ -0.05)
Sentinel-1/Sentinel-2 Fusion Results
Photo-Interpretation Process for Validation Instances
Deep Learning for Events Detection
Deep Learning for Events Detection
(Large Gaps – Artificially Hidden Events)
Deep Learning for Events Detection
Mowing Prediction Mask
Towards exhaustive CAP monitoring & Quantification of
Grassland Use Intensity
82%
9%
9%
Compliance (at least one mowing
event until 1st
of August)
Compliant Non-Compliant Not Assessed
Remarks & Future work
• A pixel-wise (DL) routine that can create dense NDVI time-series integrating both Synthetic Aperture Radar (Sentinel 1)
and the available cloud free Sentinel 2 acquisitions
• An original Deep Learning Mowing Detection Algorithm based on Recurrent Neural Networks
• Meteorological and other ancillary metadata (e.g. topographic, DOY, LPIS subclass etc.) integration
• Evaluate more sophisticated architecture layers (e.g. self-attention)
• Analyze grasslands management activity of Lithuania and provide an eco-scheme knowledge
• Generalization of pipeline to a variety of similar event detection tasks on SITS (e.g. Stubble Burning Identification)
• Sentinel-1B anomaly that occurred on 23 December 2021 is still on-going → Inclusion of more Sentinel-1A Relative Orbits
Publications & Conferences
Tsardanidis, I., Sitokonstantinou, V., Koukos, A., Drivas, T. and Kontoes, C. 2022. Deep Learning Methods for Grassland
Activity Monitoring.
Tsardanidis, I., Sitokonstantinou, V., Koukos, A., Drivas T. and Kontoes, C., "Deep Learning for Event Detection on
Grasslands", B42C-07 presented at 2021 AGU Fall Meeting, 13-17 Dec.
Grassland Mowing Events Detection

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Grassland Mowing Events Detection

  • 1. Grassland Mowing Events Detection 25/10/2022 Vassilis Sitokonstantinou, Mariza Kaskara, Iason Tsardanidis, Thanassis Drivas, Alexandros Marantos, Alkis Koukos, Haris Kontoes AgriHUB | Agriculture, Ecosystems and Environment Group National Observatory of Athens Institute for Astronomy, Astrophysics, Space Applications & Remote Sensing BEYOND Center, Athens, Greece
  • 2. Datacube in practice 3 Full-Year Datacube datasets of Sentinel-1 and Sentinel-2 images for both Cyprus and Lithuania from 2020 • Storage of various dataset, from Sentinel missions to LPIS • Allow scalable continent scale processing of the stored data • Creation of various feature spaces from the same data; Pixel-based, object-based, path- based
  • 3. • Cloud Masking and Indices calculation • Parcels Indexing and Rasterization • Buffering • Photo-interpretation • Analytics and Summary Aggregated Statistics • Fast and Easy subset extraction • Pixel-wise Time-series preprocessing • Etc. Datacube in practice
  • 4. Clouds and Small parcels The ever present problems Damn it’s cloudy!!! ▪ Employ validated fusion algorithms on Sentinel-1 and Sentinel-2 data to overcome cloud coverage Damn that parcel is small!!! ▪ Pixel-based approaches and advanced AI algorithms can partly solve the problem ▪ Improved and more sophisticated routine exploiting the results and the confidence intervals provided
  • 5. • Reconstruction of NDVI based on S1 data (Cloud Coverage) • Mowing events identification based on the new artificially created NDVI • Mowing compliance results according national regulations Grasslands Mowing Events Detection
  • 6. Grassland Monitoring for the Common Agricultural Policy (CAP) Extensive Cloud Coverage and S1-S2 Fusion Deep Learning for Event Detection Quantification of the Grassland Use Intensity and CAP monitoring Remarks & Future work Deep Learning for fusion of Sentinel- 1 and Sentinel-2 data and grassland mowing detection
  • 7. Grassland Monitoring for the Common Agriculture Policy (CAP) • Grasslands provide a wide range of ecosystem services (e.g. fodder for live stocking animals, wildlife habitats, carbon storage, soil erosion protection etc.) • The Common Agricultural Policy (CAP) requires the systematic and timely remote monitoring of Agricultural Lands and Grasslands • Pillar I of CAP - The detection of grassland mowing events at the parcel-level has been identified as a key data product to assess the compliance with respect several CAP measures, including the crop diversification and permanent grassland areas maintenance • Most countries also define national regulations such as a reference date or period for the mowing of permanent grasslands, as well as grazing events, boundaries elements, mowing date or mowing within an agronomic year (e.g. Spain, Italy) • Pillar II of CAP - Conceptual Design of targeted agro-ecological and climate- focused measures (CAP post-2020)
  • 8. Study Area The study was conducted in the country of Lithuania (April-October 2020) * Based on Climatic Regioning of Lithuania 2013 (Lithuanian Hydrometeorological Service under the Ministry of Environmentof Lithuania)
  • 9. Sentinel-2 Data The study was conducted in the country of Lithuania (April-October 2020) Sample parcels (area > 0.5 hectares) are taken from 6 different regions of Lithuania Spatial Resolution: 10m x 10m Sentinel-2 L2A • Normalized Difference Vegetation Index (NDVI) • Scene Classification (SCL) based on sen2cor L2A processor
  • 10. Sentinel-1 Data • Sentinel-1 GRD (rel. orbits: 58, 131) → Backscattering coefficients (VV-VH) • Sentinel-1 Coherence (rel. orbits: 58, 131) →Coherence coefficients (VV-VH) Spatial Resolution: 20m x 20m Rel.orbit 131 Rel.orbit 58
  • 11. Cloud Masking Other Masks: • MAJA • Fmask • s2cloudless
  • 12. Common Temporal System of Reference
  • 13. Sparsity due to Cloud Coverage and Artificial Masking
  • 15. Artificial Masking on Dense Time-series DENSE NDVI (TEMP. RESAMPLED) MASK
  • 16. Why not Temporal Interpolation? • What when we have large gaps ? • What when we have steep drops ?
  • 21. Sentinel-1/Sentinel-2 Fusion Results NDVI drops (𝑁𝐷𝑉𝐼𝑑𝑖𝑓𝑓 ≤ -0.05)
  • 23. Photo-Interpretation Process for Validation Instances
  • 24. Deep Learning for Events Detection
  • 25. Deep Learning for Events Detection (Large Gaps – Artificially Hidden Events)
  • 26. Deep Learning for Events Detection Mowing Prediction Mask
  • 27. Towards exhaustive CAP monitoring & Quantification of Grassland Use Intensity 82% 9% 9% Compliance (at least one mowing event until 1st of August) Compliant Non-Compliant Not Assessed
  • 28. Remarks & Future work • A pixel-wise (DL) routine that can create dense NDVI time-series integrating both Synthetic Aperture Radar (Sentinel 1) and the available cloud free Sentinel 2 acquisitions • An original Deep Learning Mowing Detection Algorithm based on Recurrent Neural Networks • Meteorological and other ancillary metadata (e.g. topographic, DOY, LPIS subclass etc.) integration • Evaluate more sophisticated architecture layers (e.g. self-attention) • Analyze grasslands management activity of Lithuania and provide an eco-scheme knowledge • Generalization of pipeline to a variety of similar event detection tasks on SITS (e.g. Stubble Burning Identification) • Sentinel-1B anomaly that occurred on 23 December 2021 is still on-going → Inclusion of more Sentinel-1A Relative Orbits
  • 29. Publications & Conferences Tsardanidis, I., Sitokonstantinou, V., Koukos, A., Drivas, T. and Kontoes, C. 2022. Deep Learning Methods for Grassland Activity Monitoring. Tsardanidis, I., Sitokonstantinou, V., Koukos, A., Drivas T. and Kontoes, C., "Deep Learning for Event Detection on Grasslands", B42C-07 presented at 2021 AGU Fall Meeting, 13-17 Dec.