SlideShare a Scribd company logo
Test for Enrichment for several conditions over
     Import Data from Biomart
          many modules or gene-sets
Results depicted in browsable heatmaps




               conditions




                                         modules
Move, search, filter and sort rows and columns
See the details of every statistical test
 by selecting the corresponding cell
Edit heatmaps: change colors, grid, fonts, sizes ...
Import Data from IntOGen
Import Data from Biomart

More Related Content

Viewers also liked

Juc paris olivier lamy talk
Juc paris olivier lamy talkJuc paris olivier lamy talk
Juc paris olivier lamy talkOlivier Lamy
 
Web Science, SADI, and the Singularity
Web Science, SADI, and the SingularityWeb Science, SADI, and the Singularity
Web Science, SADI, and the Singularity
Mark Wilkinson
 
How SADI & SHARE help restore the Scientific Method to in silico science
How SADI & SHARE help restore the Scientific Method to in silico scienceHow SADI & SHARE help restore the Scientific Method to in silico science
How SADI & SHARE help restore the Scientific Method to in silico science
Mark Wilkinson
 
It’s a WIN, WIN: ‘WordPress On Windows’
It’s a WIN, WIN: ‘WordPress On Windows’It’s a WIN, WIN: ‘WordPress On Windows’
It’s a WIN, WIN: ‘WordPress On Windows’
Brendan Sera-Shriar
 
ANDRE BOCELLI- SUIZA
ANDRE BOCELLI- SUIZAANDRE BOCELLI- SUIZA
ANDRE BOCELLI- SUIZApipis397
 
LA FARMACIA DE DIOS
LA FARMACIA DE DIOSLA FARMACIA DE DIOS
LA FARMACIA DE DIOS
pipis397
 
Curriculum specification F5
Curriculum specification F5Curriculum specification F5
Curriculum specification F5hajahrokiah
 
Web Science - ISoLA 2012
Web Science - ISoLA 2012Web Science - ISoLA 2012
Web Science - ISoLA 2012
Mark Wilkinson
 
Portfolio PlusAnimations 2009 NL
Portfolio PlusAnimations 2009 NLPortfolio PlusAnimations 2009 NL
Portfolio PlusAnimations 2009 NLrogiervanmeeuwen
 
An Introduction to Vanilla Forums - FSOSS 2010
An Introduction to Vanilla Forums - FSOSS 2010An Introduction to Vanilla Forums - FSOSS 2010
An Introduction to Vanilla Forums - FSOSS 2010
Brendan Sera-Shriar
 
Using Semantics to personalize medical research
Using Semantics to personalize medical researchUsing Semantics to personalize medical research
Using Semantics to personalize medical research
Mark Wilkinson
 
Glanz Industries, Inc.
Glanz Industries, Inc.Glanz Industries, Inc.
Glanz Industries, Inc.
guest200ab0
 
Making the Most of Plug-ins - WordCamp Toronto 2008
Making the Most of Plug-ins - WordCamp Toronto 2008Making the Most of Plug-ins - WordCamp Toronto 2008
Making the Most of Plug-ins - WordCamp Toronto 2008
Brendan Sera-Shriar
 
Building a community around your blog v3
Building a community around your blog v3Building a community around your blog v3
Building a community around your blog v3
Brendan Sera-Shriar
 
Lectores estrellas de Primaria
Lectores estrellas de PrimariaLectores estrellas de Primaria
Lectores estrellas de PrimariaPaola Padilla
 
Enhancing Reproducibility and Transparency in Clinical Research through Seman...
Enhancing Reproducibility and Transparency in Clinical Research through Seman...Enhancing Reproducibility and Transparency in Clinical Research through Seman...
Enhancing Reproducibility and Transparency in Clinical Research through Seman...
Mark Wilkinson
 
Tutorial 1.6 - Export heatmap image and table results
Tutorial 1.6 - Export heatmap image and table resultsTutorial 1.6 - Export heatmap image and table results
Tutorial 1.6 - Export heatmap image and table resultsBiomedical Genomics (GRIB)
 

Viewers also liked (18)

Juc paris olivier lamy talk
Juc paris olivier lamy talkJuc paris olivier lamy talk
Juc paris olivier lamy talk
 
Web Science, SADI, and the Singularity
Web Science, SADI, and the SingularityWeb Science, SADI, and the Singularity
Web Science, SADI, and the Singularity
 
How SADI & SHARE help restore the Scientific Method to in silico science
How SADI & SHARE help restore the Scientific Method to in silico scienceHow SADI & SHARE help restore the Scientific Method to in silico science
How SADI & SHARE help restore the Scientific Method to in silico science
 
It’s a WIN, WIN: ‘WordPress On Windows’
It’s a WIN, WIN: ‘WordPress On Windows’It’s a WIN, WIN: ‘WordPress On Windows’
It’s a WIN, WIN: ‘WordPress On Windows’
 
ANDRE BOCELLI- SUIZA
ANDRE BOCELLI- SUIZAANDRE BOCELLI- SUIZA
ANDRE BOCELLI- SUIZA
 
LA FARMACIA DE DIOS
LA FARMACIA DE DIOSLA FARMACIA DE DIOS
LA FARMACIA DE DIOS
 
Curriculum specification F5
Curriculum specification F5Curriculum specification F5
Curriculum specification F5
 
Web Science - ISoLA 2012
Web Science - ISoLA 2012Web Science - ISoLA 2012
Web Science - ISoLA 2012
 
Portfolio PlusAnimations 2009 NL
Portfolio PlusAnimations 2009 NLPortfolio PlusAnimations 2009 NL
Portfolio PlusAnimations 2009 NL
 
An Introduction to Vanilla Forums - FSOSS 2010
An Introduction to Vanilla Forums - FSOSS 2010An Introduction to Vanilla Forums - FSOSS 2010
An Introduction to Vanilla Forums - FSOSS 2010
 
Using Semantics to personalize medical research
Using Semantics to personalize medical researchUsing Semantics to personalize medical research
Using Semantics to personalize medical research
 
Glanz Industries, Inc.
Glanz Industries, Inc.Glanz Industries, Inc.
Glanz Industries, Inc.
 
Making the Most of Plug-ins - WordCamp Toronto 2008
Making the Most of Plug-ins - WordCamp Toronto 2008Making the Most of Plug-ins - WordCamp Toronto 2008
Making the Most of Plug-ins - WordCamp Toronto 2008
 
Building a community around your blog v3
Building a community around your blog v3Building a community around your blog v3
Building a community around your blog v3
 
Lectores estrellas de Primaria
Lectores estrellas de PrimariaLectores estrellas de Primaria
Lectores estrellas de Primaria
 
Enhancing Reproducibility and Transparency in Clinical Research through Seman...
Enhancing Reproducibility and Transparency in Clinical Research through Seman...Enhancing Reproducibility and Transparency in Clinical Research through Seman...
Enhancing Reproducibility and Transparency in Clinical Research through Seman...
 
WPAN
WPANWPAN
WPAN
 
Tutorial 1.6 - Export heatmap image and table results
Tutorial 1.6 - Export heatmap image and table resultsTutorial 1.6 - Export heatmap image and table results
Tutorial 1.6 - Export heatmap image and table results
 

More from Biomedical Genomics (GRIB) (10)

Tutorial 1.5 - Edit heatmaps
Tutorial 1.5 - Edit heatmapsTutorial 1.5 - Edit heatmaps
Tutorial 1.5 - Edit heatmaps
 
Tutorial 1.4 - Explore results in a heatmap
Tutorial 1.4 - Explore results in a heatmapTutorial 1.4 - Explore results in a heatmap
Tutorial 1.4 - Explore results in a heatmap
 
Tutorial 1.3 - Run Enrichment Analysis
Tutorial 1.3 - Run Enrichment AnalysisTutorial 1.3 - Run Enrichment Analysis
Tutorial 1.3 - Run Enrichment Analysis
 
Tutorial 1.2 - Import modules from Biomart
Tutorial 1.2 - Import modules from BiomartTutorial 1.2 - Import modules from Biomart
Tutorial 1.2 - Import modules from Biomart
 
Tutorial 1.1 - Import Intogen tumor types
Tutorial 1.1 - Import Intogen tumor typesTutorial 1.1 - Import Intogen tumor types
Tutorial 1.1 - Import Intogen tumor types
 
Analyze Your Modules
Analyze Your ModulesAnalyze Your Modules
Analyze Your Modules
 
Cancer Gene Prioritization
Cancer Gene PrioritizationCancer Gene Prioritization
Cancer Gene Prioritization
 
Combine Experiments
Combine ExperimentsCombine Experiments
Combine Experiments
 
Gene Search
Gene SearchGene Search
Gene Search
 
Tumor Type Search
Tumor Type SearchTumor Type Search
Tumor Type Search
 

Recently uploaded

UiPath Test Automation using UiPath Test Suite series, part 4
UiPath Test Automation using UiPath Test Suite series, part 4UiPath Test Automation using UiPath Test Suite series, part 4
UiPath Test Automation using UiPath Test Suite series, part 4
DianaGray10
 
Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...
Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...
Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...
Thierry Lestable
 
Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...
Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...
Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...
Ramesh Iyer
 
De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...
De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...
De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...
Product School
 
Monitoring Java Application Security with JDK Tools and JFR Events
Monitoring Java Application Security with JDK Tools and JFR EventsMonitoring Java Application Security with JDK Tools and JFR Events
Monitoring Java Application Security with JDK Tools and JFR Events
Ana-Maria Mihalceanu
 
Assuring Contact Center Experiences for Your Customers With ThousandEyes
Assuring Contact Center Experiences for Your Customers With ThousandEyesAssuring Contact Center Experiences for Your Customers With ThousandEyes
Assuring Contact Center Experiences for Your Customers With ThousandEyes
ThousandEyes
 
The Art of the Pitch: WordPress Relationships and Sales
The Art of the Pitch: WordPress Relationships and SalesThe Art of the Pitch: WordPress Relationships and Sales
The Art of the Pitch: WordPress Relationships and Sales
Laura Byrne
 
FIDO Alliance Osaka Seminar: Overview.pdf
FIDO Alliance Osaka Seminar: Overview.pdfFIDO Alliance Osaka Seminar: Overview.pdf
FIDO Alliance Osaka Seminar: Overview.pdf
FIDO Alliance
 
Connector Corner: Automate dynamic content and events by pushing a button
Connector Corner: Automate dynamic content and events by pushing a buttonConnector Corner: Automate dynamic content and events by pushing a button
Connector Corner: Automate dynamic content and events by pushing a button
DianaGray10
 
Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...
Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...
Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...
UiPathCommunity
 
Leading Change strategies and insights for effective change management pdf 1.pdf
Leading Change strategies and insights for effective change management pdf 1.pdfLeading Change strategies and insights for effective change management pdf 1.pdf
Leading Change strategies and insights for effective change management pdf 1.pdf
OnBoard
 
Elevating Tactical DDD Patterns Through Object Calisthenics
Elevating Tactical DDD Patterns Through Object CalisthenicsElevating Tactical DDD Patterns Through Object Calisthenics
Elevating Tactical DDD Patterns Through Object Calisthenics
Dorra BARTAGUIZ
 
Securing your Kubernetes cluster_ a step-by-step guide to success !
Securing your Kubernetes cluster_ a step-by-step guide to success !Securing your Kubernetes cluster_ a step-by-step guide to success !
Securing your Kubernetes cluster_ a step-by-step guide to success !
KatiaHIMEUR1
 
Mission to Decommission: Importance of Decommissioning Products to Increase E...
Mission to Decommission: Importance of Decommissioning Products to Increase E...Mission to Decommission: Importance of Decommissioning Products to Increase E...
Mission to Decommission: Importance of Decommissioning Products to Increase E...
Product School
 
UiPath Test Automation using UiPath Test Suite series, part 3
UiPath Test Automation using UiPath Test Suite series, part 3UiPath Test Automation using UiPath Test Suite series, part 3
UiPath Test Automation using UiPath Test Suite series, part 3
DianaGray10
 
FIDO Alliance Osaka Seminar: Passkeys at Amazon.pdf
FIDO Alliance Osaka Seminar: Passkeys at Amazon.pdfFIDO Alliance Osaka Seminar: Passkeys at Amazon.pdf
FIDO Alliance Osaka Seminar: Passkeys at Amazon.pdf
FIDO Alliance
 
Designing Great Products: The Power of Design and Leadership by Chief Designe...
Designing Great Products: The Power of Design and Leadership by Chief Designe...Designing Great Products: The Power of Design and Leadership by Chief Designe...
Designing Great Products: The Power of Design and Leadership by Chief Designe...
Product School
 
Generating a custom Ruby SDK for your web service or Rails API using Smithy
Generating a custom Ruby SDK for your web service or Rails API using SmithyGenerating a custom Ruby SDK for your web service or Rails API using Smithy
Generating a custom Ruby SDK for your web service or Rails API using Smithy
g2nightmarescribd
 
Software Delivery At the Speed of AI: Inflectra Invests In AI-Powered Quality
Software Delivery At the Speed of AI: Inflectra Invests In AI-Powered QualitySoftware Delivery At the Speed of AI: Inflectra Invests In AI-Powered Quality
Software Delivery At the Speed of AI: Inflectra Invests In AI-Powered Quality
Inflectra
 
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...
Jeffrey Haguewood
 

Recently uploaded (20)

UiPath Test Automation using UiPath Test Suite series, part 4
UiPath Test Automation using UiPath Test Suite series, part 4UiPath Test Automation using UiPath Test Suite series, part 4
UiPath Test Automation using UiPath Test Suite series, part 4
 
Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...
Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...
Empowering NextGen Mobility via Large Action Model Infrastructure (LAMI): pav...
 
Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...
Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...
Builder.ai Founder Sachin Dev Duggal's Strategic Approach to Create an Innova...
 
De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...
De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...
De-mystifying Zero to One: Design Informed Techniques for Greenfield Innovati...
 
Monitoring Java Application Security with JDK Tools and JFR Events
Monitoring Java Application Security with JDK Tools and JFR EventsMonitoring Java Application Security with JDK Tools and JFR Events
Monitoring Java Application Security with JDK Tools and JFR Events
 
Assuring Contact Center Experiences for Your Customers With ThousandEyes
Assuring Contact Center Experiences for Your Customers With ThousandEyesAssuring Contact Center Experiences for Your Customers With ThousandEyes
Assuring Contact Center Experiences for Your Customers With ThousandEyes
 
The Art of the Pitch: WordPress Relationships and Sales
The Art of the Pitch: WordPress Relationships and SalesThe Art of the Pitch: WordPress Relationships and Sales
The Art of the Pitch: WordPress Relationships and Sales
 
FIDO Alliance Osaka Seminar: Overview.pdf
FIDO Alliance Osaka Seminar: Overview.pdfFIDO Alliance Osaka Seminar: Overview.pdf
FIDO Alliance Osaka Seminar: Overview.pdf
 
Connector Corner: Automate dynamic content and events by pushing a button
Connector Corner: Automate dynamic content and events by pushing a buttonConnector Corner: Automate dynamic content and events by pushing a button
Connector Corner: Automate dynamic content and events by pushing a button
 
Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...
Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...
Dev Dives: Train smarter, not harder – active learning and UiPath LLMs for do...
 
Leading Change strategies and insights for effective change management pdf 1.pdf
Leading Change strategies and insights for effective change management pdf 1.pdfLeading Change strategies and insights for effective change management pdf 1.pdf
Leading Change strategies and insights for effective change management pdf 1.pdf
 
Elevating Tactical DDD Patterns Through Object Calisthenics
Elevating Tactical DDD Patterns Through Object CalisthenicsElevating Tactical DDD Patterns Through Object Calisthenics
Elevating Tactical DDD Patterns Through Object Calisthenics
 
Securing your Kubernetes cluster_ a step-by-step guide to success !
Securing your Kubernetes cluster_ a step-by-step guide to success !Securing your Kubernetes cluster_ a step-by-step guide to success !
Securing your Kubernetes cluster_ a step-by-step guide to success !
 
Mission to Decommission: Importance of Decommissioning Products to Increase E...
Mission to Decommission: Importance of Decommissioning Products to Increase E...Mission to Decommission: Importance of Decommissioning Products to Increase E...
Mission to Decommission: Importance of Decommissioning Products to Increase E...
 
UiPath Test Automation using UiPath Test Suite series, part 3
UiPath Test Automation using UiPath Test Suite series, part 3UiPath Test Automation using UiPath Test Suite series, part 3
UiPath Test Automation using UiPath Test Suite series, part 3
 
FIDO Alliance Osaka Seminar: Passkeys at Amazon.pdf
FIDO Alliance Osaka Seminar: Passkeys at Amazon.pdfFIDO Alliance Osaka Seminar: Passkeys at Amazon.pdf
FIDO Alliance Osaka Seminar: Passkeys at Amazon.pdf
 
Designing Great Products: The Power of Design and Leadership by Chief Designe...
Designing Great Products: The Power of Design and Leadership by Chief Designe...Designing Great Products: The Power of Design and Leadership by Chief Designe...
Designing Great Products: The Power of Design and Leadership by Chief Designe...
 
Generating a custom Ruby SDK for your web service or Rails API using Smithy
Generating a custom Ruby SDK for your web service or Rails API using SmithyGenerating a custom Ruby SDK for your web service or Rails API using Smithy
Generating a custom Ruby SDK for your web service or Rails API using Smithy
 
Software Delivery At the Speed of AI: Inflectra Invests In AI-Powered Quality
Software Delivery At the Speed of AI: Inflectra Invests In AI-Powered QualitySoftware Delivery At the Speed of AI: Inflectra Invests In AI-Powered Quality
Software Delivery At the Speed of AI: Inflectra Invests In AI-Powered Quality
 
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...
 

Gitools

Editor's Notes