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2-May-15
1
PRESENTED BY: BALVEER KAUR
M.Sc. II BT {SEM III}
130181118
PRESENTED TO : PARVEEN PAHUJA
 Introduction
 why are enzymes less active in organic
solvents than in water?
 Modes of using enzymes in organic solvents
 Fundamentals of non aqueous enzymology
 Properties of enzymes in organic solvents
 Advantages
 Disadvantages
 Applications
2-May-15 2
 Enzymes used in their natural aqueous media
for production of chemicals & polymers
 Most of such compounds are insoluble in
water, water frequently give unwanted side
reactions & degrades organic reagents
 Such reactions possible only in organic solvents
 Thermodynamic equilibria of mostly these
processes are unfavorable in water
 Technological utility of enzymes enhanced
greatly in organic solvents
2-May-15 3
 For eg: the proteases α-chymotrypsin & subtilisin
have activities 104-105-times lower in anhydrous
octane than in water; the two enzymes are less
active still in most other organic solvents.
 Reasons:
 Diffusion & accessibility factors
 Structural changes
 Substrate desolvation & transition state energy
 Conformational mobility
 ph situation
2-May-15 4
2-May-15 5
2-May-15 6
2-May-15 7
 Natural enzymes with organic solvent-tolerance
are useful for employing in organic solvents.
 To find organic solvent tolerant enzymes,
screening for microorganisms is done.
 First reported organic solvent-tolerant lipolytic
enzyme from an organic solvent-tolerant
bacterium, Pseudomonas aeruginosa.
 Then reported an organic solvent-tolerant
proteolytic enzyme from an organic solvent
tolerant bacterium, P. aeruginosa
2-May-15 8
SOLUBILIZED ENZYME
PREPARATIONS
SOLID STATE
PREPARATIONS
2-May-15 9
PEGPPyethylene glycol
A mono methoxy- PEG was allowed to react with cyan uric chloride so
that 2 PEG molecules were bound to each cyan uric chloride residue .
Amino groups on enzymes made a nucleophilic attack in the third
activated position . In this way 2 PEG chains linked/ amino group
modified
Polyacrylates
A polymer formed using acrylic acid, methyl methacrylate &
2- ethoxy ethyl methacrylate
2-May-15 10
NON COVALENTLY
MODIFIED
COMPLEXES
Enzyme
surfactants
complexes eg:
didodecyl
glucosyly
glutamate and
Aerosol OT
Enzyme polymer
complexes eg:
ethlycellulose, poly
vinyl butyral &
polyethylene glycol
Surfactant coated
Nano granules eg;
Aerosol OT as
surfactant & range
of org. solvents
soluble in
nanogranules are
toluene, acetone &
ethanol
2-May-15 11
ENZYMES IN
MICROEMULSIONS
Surfactants &
solvents eg: aerosol
OT , CTAB
chloroform
Spectroscopic
studies eg:
Fluorescence & CD
Detergent less
micro emulsions
Eg:
Water, hexane &
isopropanol
 ENZYMES IMMOBILIZED ON SUPPORTS
 Immobilization method
 Mass transfer limitations
 Influence of pore size
 Direct effects of the support on the enzyme
 Effect of additives
2-May-15 12
 Inorganic supports eg: controlled pore glass
& diatomaceous earth (celite)
 Synthetic polymers eg: polyethene,
polypropene, ion exchange resins, cross-linked
polystyrene etc.
 Polysaccharide supports eg: Agarose gels,
alginate gels, chitin etc.
2-May-15 13
 Enzyme powders- lyophilization eg: Resolution of
racemic mixtures using hydrolytic enzymes (
Lipase)
 pH control
 Inactivation during lyophilization eg: sorbitol (
lyoprotectants)
 Enzyme crystals : crosslinking with
glutaraldehyde & stability increased towards the
dimethoxyethane.
 Active site quantification eg: lyophilized
chymotrypsin and subtilisin show that about 65%
active site were accessible
2-May-15 14
 WATER : Amount of water associated with the enzyme –
key determinant of the properties of enzymes.
Effect of water on enzyme activity
 Water content in typical non aqueous enzyme system is
usually as low as o.o1% . Small variation in water content
changes the enzyme activity.
 Amount of water required for catalysis – dependent on
enzyme eg: lipases are highly active when few molecules are
associated
 subtilisin & chymotrypsin - < 50 molecules of water/
enzyme molecule
 making an enzyme more hydrophobic by chemical
modification can reduce the requirement of water for
enzyme
2-May-15 15
2-May-15 16
Effect of water on protein mobility
 Water acts as plasticizer to increase the
flexibility – polarizability increases – mobility
also increases.
 Active site mobility increases upon addition of
water eg: For subtilisin the increase in active
site flexibility – increases active site polarity
2-May-15 17
 SOLVENT : solvent not only directly or
indirectly affects the enzyme activity &
stability but also changes the specificity.
Effect of solvent on enzyme active centers:
 Solvent can affect the activity by disrupting the
total number of active sites.
 Active site conc. of chymotrypsin in water not
affected by addition of 3 dipolar solvents: 32%
dioxan,14% acetone & 13% acetonitrile but only
2/3 of this is catalytically active in dry octane .
 Eg: active site of chymotrypsin in organic
media is disrupted around 42%
2-May-15 18
Effect of solvent on substrates & products
 Solvents can also effect the conc. of substrates
& products in aqueous layer around the
enzyme & then affect the enzyme activity.
 Substrate specificity .
 Enantio selectivity
 Chemo selectivity
 Regioselectivity
 Rigidity
 Enhanced substrate stability
 Ligand induced enzyme memory
2-May-15 19
 Binding energy of an enzyme with substrate
determined by the difference btw energy of ES
complex & energy of enzyme & substrate in solution,
binding is always influenced by solvent eg: substrate
specificity of α-chymotrypsin, esterase, & subtilisin
changed upon replacement of reaction medium with
an organic solvent.
 The reversal of specificity in solvents was due to lack of
hydrophobic interaction in non aqueous media.
 In fact, the substrate specificity of α-chymotrypsin in
octane was reversed compared to that in water.
 Similar results with PEG modified chymotrypsin
,trypsin & subtilisin in benzene.
2-May-15 20
 Enzymatic enantio- and prochiral selectivities can
be greatly influenced, and sometimes reversed in
organic solvents
Example : The enantioselectivity of α- chymotrypsin
in the transesterification of methyl 3-hydroxy-2-
phenylpropionate with propanol has been studied.
The enzyme strongly prefers the S-enantiomer of the
substrate in some solvents, the R-enantiomer is more
reactive in others.
 Few methods exist that affect the enantio
selectivity of enzymatic reactions : site directed
mutagenesis, use of enantio selective inhibitors,
coenzyme analogs, temperature & water miscible
co solvents.
2-May-15 21
 Enantio selectivity of the enzyme was lower in
the solvents with higher hydrophobicity.
 Eg: Enantio selectivity of subtilisin, elastase,
trypsin & α-chymotrypsin were lower in
organic solvents different from that in water.
2-May-15 22
 Ability to discriminate btw chemically distinct
functional groups.
 Eg. Aspergillus niger lipase catalyzed acylation of 6-
amino – 1- hexanol proceeded with preference for
hydroxyl group .
 This unexpected selectivity allowed the authors to
produce monoesters of amino alcohols in good yield.
 Chemo selectivity of the enzyme affected by the
reaction medium eg: the chemo selectivity of
pseudomonas sp. Lipase in the acylation of N-α-
benzoyl-L-lysinol with trifluoroethyl butyrate varied
from 1.1 in tertbutyl alcohol to 21 in 1,2-dichloroethane
2-May-15 23
 Few studies of effect of media on regioselectivity of
enzymes.
 Rudio et.al reported that the reaction rates of P. cepacia
lipase catalyzed transesterification of 9 with butanol in
organic solvents differed significantly.
2-May-15 24
 Organic solvents lack water’s ability to engage
in multiple hydrogen bonds,& have lower
dielectric constants, leading to stronger
intraprotein electrostatic interactions leading to
rigidity.
 Addition of small quantities of water or
glycerol or ethylene glycol helps increase
flexibility.
2-May-15 25
 Reason for enhanced thermo stability-
Rigidity of molecules.
Covalent processes such as deamination, peptide
hydrolysis & cysteine decomposition require
water.
 Ex:- porcine pancreatic lipase, lysozyme,
chymotrypsin, mitochondrial cytochrome
oxidase & ATPase.
2-May-15 26
 Subtilisin lyophilized from aqueous solution
containing various competitive inhibitors was
100 times more active in anhydrous solvents
than the enzyme lyophilized in the absence of
ligands
 Ligand-induced enzyme memory disappears
when the enzyme is re-dissolved in water
2-May-15 27
2-May-15 28
2-May-15 29
 One of the imp property 'molecular memory'
effect that leads to high conformational
rigidity in organic solvents
 For example, lyophilized -chymotrypsin first
dissolved in water and then diluted 100-fold
with t-amyl alcohol has a specific activity of
greater magnitude that of the same
lyophilized enzyme directly suspended in that
solvent containing the same 1% of water. As
extra water is added to this suspension,
presumably erasing the memory
 When substrates have greater solubility in organic
solvents
 Reduced risk of microbial growth
 Enhanced thermo-stability
 Relative ease of product recovery from organic
solvents
 More energy efficient downstream processing when
volatile solvents are used
 Ability to carry out new reactions impossible in water
because of kinetic or thermodynamic restrictions
 Insolubility of enzymes in organic media
2-May-15 30
 Inactivation of enzymes.
 Labour & cost-intensive preparation of
biocatalysts in covalently modified
systems.
 Mass-transfer limitations in case of
heterogeneous systems or viscous
solvents.
2-May-15 31
 PRODUCTION OF INTERMEDIATES
OF HERBICIDES &
PHARMACEUTICALS.
 PRODUCTION OF ESTER FUELS.
 PRODUCTION OF POLYPHENOLS.
2-May-15 32
 Enantiopure 2-chloro- and 2-bromo-propionic
acids , used as intermediates for the synthesis
of phenoxypropionic herbicides and of some
pharmaceuticals have been obtained from yeast
lipase catalysed enantioselective butanolysis in
anhydrous solvents.
2-May-15 33
 Production from coal-derived alcohols and
fatty acids
 Phenolic tars from coal gasification wastes
were converted to alcohol by treating with
ethylene oxide and the intermediate alcohols
were esterified with the fatty acids in a
nonaqueous lipase system. Phenoxyethyl esters
thus formed could be substituted for diesel
fuels
2-May-15 34
 Deals with peroxidase- catalyzed
polymerization of phenols.
 Polyphenols thus formed are used as
conventional phenol- formaldehyde resins as
adhesives
 Also as laminates and photographic developers
2-May-15 35
 Ionic liquids can be defined as salts that do not
crystallize at room temperature
 Ionic liquids are possible “green” replacements
for organic solvents because have no vapour
pressure and, therefore, may be easier to
efficiently reuse than organic solvents
 Ionic liquids are widely investigated for
applications in organo-metallic catalysis
2-May-15 36
 Enzyme activities in ionic liquids are generally
comparable or sometimes higher than those
observed in organic solvents
 In ionic liquids enhanced thermal and operational
stabilities and regio- or enantioselectivities have
been observed
 Ionic liquids permit to carry out enzyme-catalyzed
reactions in non-aqueous media on polar
substrates such as peptides, sugars, nucleotides,
and biochemical intermediates
 A serious drawback of ionic liquids is represented
by the fact that product isolation is more complex,
especially for non-volatile materials
2-May-15 37
 Gupta, M. N. (1992) Enzyme function in organic
solvents.
 A.M Klibanov, A. M. (1988) Enzymatic Catalysis in
Non-aqueous Solvent.
 NET sources:
 http://biowiki.ucdavis.edu/Biochemistry/Catalysis/E
NZYME_CATALYSIS_IN_ORGANIC_SOLVENTS
 users.unimi.it/ScDotChi/documents/lezioni/riva_ser
gio/Riva%20_Organic%20solvents%20_%207_%20fund
amentals.pdf
 syncozymes.com/chinese/bioresource/Enzyme
Immobilization-Papers/trends biotechnol,1997,15,97-
101.pdf
2-May-15 38
2-May-15 39

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Enzymes in organic solvents

  • 1. 2-May-15 1 PRESENTED BY: BALVEER KAUR M.Sc. II BT {SEM III} 130181118 PRESENTED TO : PARVEEN PAHUJA
  • 2.  Introduction  why are enzymes less active in organic solvents than in water?  Modes of using enzymes in organic solvents  Fundamentals of non aqueous enzymology  Properties of enzymes in organic solvents  Advantages  Disadvantages  Applications 2-May-15 2
  • 3.  Enzymes used in their natural aqueous media for production of chemicals & polymers  Most of such compounds are insoluble in water, water frequently give unwanted side reactions & degrades organic reagents  Such reactions possible only in organic solvents  Thermodynamic equilibria of mostly these processes are unfavorable in water  Technological utility of enzymes enhanced greatly in organic solvents 2-May-15 3
  • 4.  For eg: the proteases α-chymotrypsin & subtilisin have activities 104-105-times lower in anhydrous octane than in water; the two enzymes are less active still in most other organic solvents.  Reasons:  Diffusion & accessibility factors  Structural changes  Substrate desolvation & transition state energy  Conformational mobility  ph situation 2-May-15 4
  • 7. 2-May-15 7  Natural enzymes with organic solvent-tolerance are useful for employing in organic solvents.  To find organic solvent tolerant enzymes, screening for microorganisms is done.  First reported organic solvent-tolerant lipolytic enzyme from an organic solvent-tolerant bacterium, Pseudomonas aeruginosa.  Then reported an organic solvent-tolerant proteolytic enzyme from an organic solvent tolerant bacterium, P. aeruginosa
  • 9. 2-May-15 9 PEGPPyethylene glycol A mono methoxy- PEG was allowed to react with cyan uric chloride so that 2 PEG molecules were bound to each cyan uric chloride residue . Amino groups on enzymes made a nucleophilic attack in the third activated position . In this way 2 PEG chains linked/ amino group modified Polyacrylates A polymer formed using acrylic acid, methyl methacrylate & 2- ethoxy ethyl methacrylate
  • 10. 2-May-15 10 NON COVALENTLY MODIFIED COMPLEXES Enzyme surfactants complexes eg: didodecyl glucosyly glutamate and Aerosol OT Enzyme polymer complexes eg: ethlycellulose, poly vinyl butyral & polyethylene glycol Surfactant coated Nano granules eg; Aerosol OT as surfactant & range of org. solvents soluble in nanogranules are toluene, acetone & ethanol
  • 11. 2-May-15 11 ENZYMES IN MICROEMULSIONS Surfactants & solvents eg: aerosol OT , CTAB chloroform Spectroscopic studies eg: Fluorescence & CD Detergent less micro emulsions Eg: Water, hexane & isopropanol
  • 12.  ENZYMES IMMOBILIZED ON SUPPORTS  Immobilization method  Mass transfer limitations  Influence of pore size  Direct effects of the support on the enzyme  Effect of additives 2-May-15 12
  • 13.  Inorganic supports eg: controlled pore glass & diatomaceous earth (celite)  Synthetic polymers eg: polyethene, polypropene, ion exchange resins, cross-linked polystyrene etc.  Polysaccharide supports eg: Agarose gels, alginate gels, chitin etc. 2-May-15 13
  • 14.  Enzyme powders- lyophilization eg: Resolution of racemic mixtures using hydrolytic enzymes ( Lipase)  pH control  Inactivation during lyophilization eg: sorbitol ( lyoprotectants)  Enzyme crystals : crosslinking with glutaraldehyde & stability increased towards the dimethoxyethane.  Active site quantification eg: lyophilized chymotrypsin and subtilisin show that about 65% active site were accessible 2-May-15 14
  • 15.  WATER : Amount of water associated with the enzyme – key determinant of the properties of enzymes. Effect of water on enzyme activity  Water content in typical non aqueous enzyme system is usually as low as o.o1% . Small variation in water content changes the enzyme activity.  Amount of water required for catalysis – dependent on enzyme eg: lipases are highly active when few molecules are associated  subtilisin & chymotrypsin - < 50 molecules of water/ enzyme molecule  making an enzyme more hydrophobic by chemical modification can reduce the requirement of water for enzyme 2-May-15 15
  • 16. 2-May-15 16 Effect of water on protein mobility  Water acts as plasticizer to increase the flexibility – polarizability increases – mobility also increases.  Active site mobility increases upon addition of water eg: For subtilisin the increase in active site flexibility – increases active site polarity
  • 17. 2-May-15 17  SOLVENT : solvent not only directly or indirectly affects the enzyme activity & stability but also changes the specificity. Effect of solvent on enzyme active centers:  Solvent can affect the activity by disrupting the total number of active sites.  Active site conc. of chymotrypsin in water not affected by addition of 3 dipolar solvents: 32% dioxan,14% acetone & 13% acetonitrile but only 2/3 of this is catalytically active in dry octane .  Eg: active site of chymotrypsin in organic media is disrupted around 42%
  • 18. 2-May-15 18 Effect of solvent on substrates & products  Solvents can also effect the conc. of substrates & products in aqueous layer around the enzyme & then affect the enzyme activity.
  • 19.  Substrate specificity .  Enantio selectivity  Chemo selectivity  Regioselectivity  Rigidity  Enhanced substrate stability  Ligand induced enzyme memory 2-May-15 19
  • 20.  Binding energy of an enzyme with substrate determined by the difference btw energy of ES complex & energy of enzyme & substrate in solution, binding is always influenced by solvent eg: substrate specificity of α-chymotrypsin, esterase, & subtilisin changed upon replacement of reaction medium with an organic solvent.  The reversal of specificity in solvents was due to lack of hydrophobic interaction in non aqueous media.  In fact, the substrate specificity of α-chymotrypsin in octane was reversed compared to that in water.  Similar results with PEG modified chymotrypsin ,trypsin & subtilisin in benzene. 2-May-15 20
  • 21.  Enzymatic enantio- and prochiral selectivities can be greatly influenced, and sometimes reversed in organic solvents Example : The enantioselectivity of α- chymotrypsin in the transesterification of methyl 3-hydroxy-2- phenylpropionate with propanol has been studied. The enzyme strongly prefers the S-enantiomer of the substrate in some solvents, the R-enantiomer is more reactive in others.  Few methods exist that affect the enantio selectivity of enzymatic reactions : site directed mutagenesis, use of enantio selective inhibitors, coenzyme analogs, temperature & water miscible co solvents. 2-May-15 21
  • 22.  Enantio selectivity of the enzyme was lower in the solvents with higher hydrophobicity.  Eg: Enantio selectivity of subtilisin, elastase, trypsin & α-chymotrypsin were lower in organic solvents different from that in water. 2-May-15 22
  • 23.  Ability to discriminate btw chemically distinct functional groups.  Eg. Aspergillus niger lipase catalyzed acylation of 6- amino – 1- hexanol proceeded with preference for hydroxyl group .  This unexpected selectivity allowed the authors to produce monoesters of amino alcohols in good yield.  Chemo selectivity of the enzyme affected by the reaction medium eg: the chemo selectivity of pseudomonas sp. Lipase in the acylation of N-α- benzoyl-L-lysinol with trifluoroethyl butyrate varied from 1.1 in tertbutyl alcohol to 21 in 1,2-dichloroethane 2-May-15 23
  • 24.  Few studies of effect of media on regioselectivity of enzymes.  Rudio et.al reported that the reaction rates of P. cepacia lipase catalyzed transesterification of 9 with butanol in organic solvents differed significantly. 2-May-15 24
  • 25.  Organic solvents lack water’s ability to engage in multiple hydrogen bonds,& have lower dielectric constants, leading to stronger intraprotein electrostatic interactions leading to rigidity.  Addition of small quantities of water or glycerol or ethylene glycol helps increase flexibility. 2-May-15 25
  • 26.  Reason for enhanced thermo stability- Rigidity of molecules. Covalent processes such as deamination, peptide hydrolysis & cysteine decomposition require water.  Ex:- porcine pancreatic lipase, lysozyme, chymotrypsin, mitochondrial cytochrome oxidase & ATPase. 2-May-15 26
  • 27.  Subtilisin lyophilized from aqueous solution containing various competitive inhibitors was 100 times more active in anhydrous solvents than the enzyme lyophilized in the absence of ligands  Ligand-induced enzyme memory disappears when the enzyme is re-dissolved in water 2-May-15 27
  • 29. 2-May-15 29  One of the imp property 'molecular memory' effect that leads to high conformational rigidity in organic solvents  For example, lyophilized -chymotrypsin first dissolved in water and then diluted 100-fold with t-amyl alcohol has a specific activity of greater magnitude that of the same lyophilized enzyme directly suspended in that solvent containing the same 1% of water. As extra water is added to this suspension, presumably erasing the memory
  • 30.  When substrates have greater solubility in organic solvents  Reduced risk of microbial growth  Enhanced thermo-stability  Relative ease of product recovery from organic solvents  More energy efficient downstream processing when volatile solvents are used  Ability to carry out new reactions impossible in water because of kinetic or thermodynamic restrictions  Insolubility of enzymes in organic media 2-May-15 30
  • 31.  Inactivation of enzymes.  Labour & cost-intensive preparation of biocatalysts in covalently modified systems.  Mass-transfer limitations in case of heterogeneous systems or viscous solvents. 2-May-15 31
  • 32.  PRODUCTION OF INTERMEDIATES OF HERBICIDES & PHARMACEUTICALS.  PRODUCTION OF ESTER FUELS.  PRODUCTION OF POLYPHENOLS. 2-May-15 32
  • 33.  Enantiopure 2-chloro- and 2-bromo-propionic acids , used as intermediates for the synthesis of phenoxypropionic herbicides and of some pharmaceuticals have been obtained from yeast lipase catalysed enantioselective butanolysis in anhydrous solvents. 2-May-15 33
  • 34.  Production from coal-derived alcohols and fatty acids  Phenolic tars from coal gasification wastes were converted to alcohol by treating with ethylene oxide and the intermediate alcohols were esterified with the fatty acids in a nonaqueous lipase system. Phenoxyethyl esters thus formed could be substituted for diesel fuels 2-May-15 34
  • 35.  Deals with peroxidase- catalyzed polymerization of phenols.  Polyphenols thus formed are used as conventional phenol- formaldehyde resins as adhesives  Also as laminates and photographic developers 2-May-15 35
  • 36.  Ionic liquids can be defined as salts that do not crystallize at room temperature  Ionic liquids are possible “green” replacements for organic solvents because have no vapour pressure and, therefore, may be easier to efficiently reuse than organic solvents  Ionic liquids are widely investigated for applications in organo-metallic catalysis 2-May-15 36
  • 37.  Enzyme activities in ionic liquids are generally comparable or sometimes higher than those observed in organic solvents  In ionic liquids enhanced thermal and operational stabilities and regio- or enantioselectivities have been observed  Ionic liquids permit to carry out enzyme-catalyzed reactions in non-aqueous media on polar substrates such as peptides, sugars, nucleotides, and biochemical intermediates  A serious drawback of ionic liquids is represented by the fact that product isolation is more complex, especially for non-volatile materials 2-May-15 37
  • 38.  Gupta, M. N. (1992) Enzyme function in organic solvents.  A.M Klibanov, A. M. (1988) Enzymatic Catalysis in Non-aqueous Solvent.  NET sources:  http://biowiki.ucdavis.edu/Biochemistry/Catalysis/E NZYME_CATALYSIS_IN_ORGANIC_SOLVENTS  users.unimi.it/ScDotChi/documents/lezioni/riva_ser gio/Riva%20_Organic%20solvents%20_%207_%20fund amentals.pdf  syncozymes.com/chinese/bioresource/Enzyme Immobilization-Papers/trends biotechnol,1997,15,97- 101.pdf 2-May-15 38