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Strawberries
• DNA is present in the cells of all living
organisms.
• The process of extracting DNA from a
cell is the first step for many laboratory
procedures in biotechnology.
• The scientist must be able to separate
DNA from the unwanted substances of
the cell gently enough so that the DNA
does not denature (break up).
• Each cell contains 9 feet of
DNA
• In an average meal, you
EAT approximately
55,000,000 cells
• This is equal to
approximately 93,205
miles of DNA.
• DNA is found in the nucleus of all
eukaryotic cells
• Most cells have the diploid 2n
chromosome number
• Many plants are polyploid (contain
several sets of chromosomes)
• Strawberries are octaploid 8n
• DNA is enclosed in a nuclear and a cell
membrane made of phospholipids
• DNA is also coiled around proteins
• Both the phospholipid layer and the
proteins must be removed to see DNA
Plant Cell Wall: cellulose and protein matrix
Cell membrane: lipids and protein
Plant Cell
Cytoplasm: proteins etc
Nucleus:
DNA & protein
• Cell membrane
• Cytoplasm
• Nuclear membrane
• Proteins
• Place the strawberry in a resealable plastic bag
and remove the air
• Squash the berry with your hand to begin the
process
• Cell membranes are made
of phospholipids
• Phospholipids won’t
dissolve in water
• What do you use in your
home to remove oils from
your hands or your dishes?
• Soap or Detergent!
• Soap gathers between oil and
water capturing the oil in a
bubble called a micelle.
• When you wash your hands, the
soap carries the oils away.
• Dawn dishwashing works BEST
to remove phospholipid
membranes
• By adding a small
amount of table salt
(NaCl) to the soap
solution, the solution
can punch holes in
the nuclear and cell
membranes
• The soapy solution
also helps removes
proteins
• DNA is tightly coiled around proteins called
histones
• Proteins must be removed to see DNA
• Enzymes, like the ones found in meat
tenderizer, can remove protein
Mashing the berry disrupts the cells & membrane
What is in the bag?
1. Clumps of whole cells and nuclei
2. Cell Membranes: lipids and protein
3. Organelles made of protein
4. Plant Cell Wall: cellulose and
protein
5. DNA bound to protein
• Clumps of cellular
debris get stuck in the
filter.
• Small molecules flow
thru.
How do we get the
DNA to separate
from the pink
liquid?
• The contents of the cell
(organelles, proteins, etc.)
must be separated from the
DNA
• The larger cell parts can be
removed by filtering the solid
from the liquid
• To see DNA, it must be extracted or “spooled”
from the remaining liquid you filtered
• DNA dissolves in water, but NOT in alcohol
• Adding COLD ALCOHOL will cause DNA to
precipitate (separate out) from the liquid filtrate
• The DNA will appear as a
white precipitate once
the alcohol is added
• HOLD THE TUBE by the
TOP, not the bottom so
the DNA strands won’t
fragment from the heat
of your hands!
• DNA is sticky and
will adhere to
other surfaces
• A bamboo skewer
can be used to
spool (remove) the
DNA by using a
turning motion.

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Dna extraction strawberry lab spring 2015

  • 2. • DNA is present in the cells of all living organisms. • The process of extracting DNA from a cell is the first step for many laboratory procedures in biotechnology. • The scientist must be able to separate DNA from the unwanted substances of the cell gently enough so that the DNA does not denature (break up).
  • 3. • Each cell contains 9 feet of DNA • In an average meal, you EAT approximately 55,000,000 cells • This is equal to approximately 93,205 miles of DNA.
  • 4. • DNA is found in the nucleus of all eukaryotic cells • Most cells have the diploid 2n chromosome number • Many plants are polyploid (contain several sets of chromosomes) • Strawberries are octaploid 8n
  • 5. • DNA is enclosed in a nuclear and a cell membrane made of phospholipids • DNA is also coiled around proteins • Both the phospholipid layer and the proteins must be removed to see DNA
  • 6. Plant Cell Wall: cellulose and protein matrix Cell membrane: lipids and protein Plant Cell Cytoplasm: proteins etc Nucleus: DNA & protein
  • 7. • Cell membrane • Cytoplasm • Nuclear membrane • Proteins
  • 8. • Place the strawberry in a resealable plastic bag and remove the air • Squash the berry with your hand to begin the process
  • 9. • Cell membranes are made of phospholipids • Phospholipids won’t dissolve in water • What do you use in your home to remove oils from your hands or your dishes? • Soap or Detergent!
  • 10. • Soap gathers between oil and water capturing the oil in a bubble called a micelle. • When you wash your hands, the soap carries the oils away. • Dawn dishwashing works BEST to remove phospholipid membranes
  • 11. • By adding a small amount of table salt (NaCl) to the soap solution, the solution can punch holes in the nuclear and cell membranes • The soapy solution also helps removes proteins
  • 12. • DNA is tightly coiled around proteins called histones • Proteins must be removed to see DNA • Enzymes, like the ones found in meat tenderizer, can remove protein
  • 13. Mashing the berry disrupts the cells & membrane What is in the bag? 1. Clumps of whole cells and nuclei 2. Cell Membranes: lipids and protein 3. Organelles made of protein 4. Plant Cell Wall: cellulose and protein 5. DNA bound to protein
  • 14. • Clumps of cellular debris get stuck in the filter. • Small molecules flow thru. How do we get the DNA to separate from the pink liquid?
  • 15. • The contents of the cell (organelles, proteins, etc.) must be separated from the DNA • The larger cell parts can be removed by filtering the solid from the liquid
  • 16. • To see DNA, it must be extracted or “spooled” from the remaining liquid you filtered • DNA dissolves in water, but NOT in alcohol • Adding COLD ALCOHOL will cause DNA to precipitate (separate out) from the liquid filtrate
  • 17. • The DNA will appear as a white precipitate once the alcohol is added • HOLD THE TUBE by the TOP, not the bottom so the DNA strands won’t fragment from the heat of your hands!
  • 18. • DNA is sticky and will adhere to other surfaces • A bamboo skewer can be used to spool (remove) the DNA by using a turning motion.