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         CLLAMM Futures: Modelling
     ecosystem responses to future scenarios
                           July 21st, 2009
                              Peter Fairweather & Rebecca Lester
                                               Flinders University
Aims
• To develop an ecosystem response model
  to predict future condition in the Coorong
• To model various possible future
  scenarios:
  • how will climate change & management affect
    the ecosystem states of the Coorong?
• Today:
  • a brief overview of approach & some of the
    key findings
An ecosystem response model for
the Coorong
Variables included
    Biological                   Environmental
•   Bird abundances (UoA, DEH)   • Flow parameters (MDBC)
•   Commercial fish CPUE            • Volumes, rates
    (SARDI)                         • Lags from previous years
•   Fish abundances (SARDI)      • Hydrology (CSIRO)
•   Macrobenthos abundances         • Level above AHD, Depths
    (FU)                            • Tidal influence, Lags

•   Macrophyte prevalence        • Meteorological (BoM)
    (UoA)                        • Water quality (CSIRO, DEH)
                                    • Salinity, [Nutrient], Turbidity
Alternating data sets approach
     Biological             Environmental
     1. Identify
     clusters
                             2. Identify
                             differing
                             conditions
      3. Confirm
      distinct states
                             4. Evaluate new
                             cases


                5. Characterise
                states
Ecosystem States
of the Coorong            True    False




                                        CLLAMMecology
      Hypersaline basin          Marine basin
What do these states look like?




Estuarine/marine       Degraded marine




                         CLLAMMecology
Environmental characteristics
                                                 MM + NL SL

                                                     DM
                      EM       M         UM                  HH       AH   UH   DH
                                                 Low n
Days since
flow

Flow volume

Salinity

Tidal
influence

[TKN]                                                na

[P]                                                  na

Turbidity                                            na


  ♦      Very low   ♦    Low   ♦   Med   ♦    High   ♦    Very high
      na = no data available
Biological characteristics              MM + NL      SL

                                                 DM
                 EM        M         UM                  HH       AH   UH   DH
                                             Low n

Fishing birds

Shorebirds

Waterfowl

Estuarine fish

Marine fish

Benthic
inverts
                                                         na

Ruppia                                           na      na                 na


  ♦   Very low   ♦   Low   ♦   Med   ♦    High   ♦    Very high
How is this modelling different?
• Multivariate, not focussed upon a univariate
  response
• Algorithm defined both states & thresholds
  • Used these to define transitions for predictions
• Wanted to model perceived decline
  • Designed to include transitional states
  • Dataset did not allow equilibrium to be identified
  ∴ removed assumption of stability from model
Management implications of
ecosystem state approach
• Simplifies definition of ecosystem condition
  per se
• Allows management at ecosystem scale
  • not just indicator species or single parameters
  • not based on preconceptions
• More flexible to manage for states than a
  focus on a single species or parameter
Scenario analyses
Approach
                             MDB SY


                           Hydrodynami
                             c model

                            Ecosystem
                           state model

      Water benefits
                           Evaluation of
                                           Ramsar obligations
                             scenarios
Other measures of impact
Scenario modelling
• Climates from CSIRO Sustainable Yields for
  MDB project, benchmark = 2030
• Flows from MDBA via Ian Webster’s
  hydrodynamic model
• 20 scenarios done, e.g.:
  •   Baseline = historic climate + average in/outflows
  •   Median Future = moderate climate
  •   Dry Future = extreme climate
  •   Extreme + 40cm SLR = extreme climate + SLR
• Modelled 12 sites X 114 years = 1368 site-yr
                                         CLLAMMecology
Changing ecosystem states




                      CLLAMMecology
How to read distribution of
ecosystem states (e.g. Baseline)

Sites on the y-axis
                                      Each site-year is
                                      colour coded




         Key to colours
                                                      Years on the x-axis
                                                                            Training
                          Blues & yellows                                   data period
                          are “healthy”
                          while greens &
                          purples/reds are
                          “unhealthy”                             CLLAMMecology
What does an ugly future look like?
e.g. Dry Future




                           CLLAMMecology
Effect of climate & sea-level rise
       Scenario
       name
                                Key to colours used
                                = state name


How to
read
this
graph

                                Blues & yellows are
                                 “healthy” while
                                greens & reds are
 Percent of total               “unhealthy”
 site-years in each
                              CLLAMMecology
 state
Effect of climate & extraction
levels
Effect of The Living Murray
initiative
Ordination of 20 scenarios
                                                                       2D Stress: 0.04      Effect of
                   Median Future, +40 cm SLR
                                                                                          Alternative model
                  Median Future, +20 cm SLR
                                                                                          Sea-level rise
                                                        Dry Future, +40 cm SLR            The Living Murray
                                                  Dry Future, +20 cm SLR                  Extraction level
         Historic Natural
                                                                                          Climate change
         Median Natural
                                                                                          Baseline


Dry Natural
                        Historic TLM off                                    Dry TLM off
                                                               Dry Future
                                 Median TLM off
Historic TLM on   Baseline                        Dry TLM on
                              Median Future
                                                               Dry Future, -10 cm SLR
Median TLM on               Median Future, -10 cm SLR

                            MM Dredging
                    Max USED Flows



                                                     Alt baseline
Summary of trends across scenarios
• Baseline = a mix of healthy & degraded states
• Future climates invoke more degraded states
   e.g. Baseline = 6%, Median Future = 11%, Dry Future = 46%
• Sea-level rise alters mix but still ~45%
• Degraded states involve little flow, higher salinities &
  a much reduced range of biota
• ‘a future heading south’ = conditions like the South
  Lagoon become more common in both lagoons



                                            CLLAMMecology
Key findings
• Climate change has potential to dramatically
  affect ecosystem states in the Coorong
  • e.g. more degraded states: Baseline = 6%,
    Median Future = 11%,Dry Future = 46%
• Extraction of water is exacerbating the
  problem
• Even small amounts of environmental water
  can alleviate the worst effects of climate
  change
• Nothing as good as water over the barrages
Key messages
• Climate change has the potential to
  devastate the Coorong
  • at current extraction levels
• But relatively small amounts of water will
  mitigate the worst
  • e.g. TLM & other similar initiatives
• Other interventions are less effective
  • but may be necessary before flows return
Conclusions
• No substitutes for barrage flows
• Climate change does not have to destroy
  Coorong ecosystems
  • extraction levels play a much bigger role
• Additional fresh water is needed
  • River Murray must be the major source
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 Thank you
THIS SPACE




                               Acknowledgements
                           •   CLLAMMecology Research Cluster &
                               CSIRO CLLAMM researchers (esp. for th
                               datasets)
                           •   CSIRO Collaboration Fund
                           •   DEH, DWLBC, SA MDB NRM Board
                           •   FR3cE
Spare slides for questions
HEADLINE TO BE PLACED IN

 Recent rainfall
THIS SPACE
Ecosystem states
• An explicit link sought between physical &
  biological data
  • driven by management requirements
• Includes transitional states
  • no emphasis on stability
  • during decline & (potentially) recovery
• Built as a state-&-transition model
  • usually defined by expert opinion
  • data-driven definition of each is also possible
Defining states & transitions
1. Identify                       2. Identify                          3. Confirm
clusters                          differing                            distinct states
•Group cases                      conditions                           •Tests relationship
•Become preliminary               •Find environmental                   b/w biota &
 states                            transitions                          environment
•Group average                    •Test model stability                •Identifies distinct
 cluster analysis                 •CART analysis                        states
                                                                       •ANOSIM analysis


              4. Evaluate new                     5. Characterise
              cases                               states                              Biological data
              •Classifies test cases              •Environmental &
              •Tests predictive                    biological                         Environmental
               capacity                            characteristics                    data
              •CART & ANOSIM                      •Indicator species
               analyses                           •SIMPER, BVStep,
                                                   other analyses
Long v Short time frames
   Long term                Short term
• Annual time step          • Quarterly time step
• 10 sites, 1999 – 2007     • 12 sites, 2005 – 2007
• 3 distinct states (86%)   • 6 distinct states (66%)
 • Long-term analyses did not pick up recent
   deteriorations in condition
 • Long- & short- term models could be
   combined (61%)
 • One model with 8 distinct states
Key biota of marine grouping
• Estuarine/marine               • Unhealthy marine
  • High abundances of             • Good numbers of yellow-
    mulloway, flounder, black        eyed mullet, hardyheads,
    bream                            some marine/estuarine
  • Good numbers of fishing          species
    birds, small waders & teal     • Good numbers of fishing
  • Diverse benthic fauna            birds, moderate numbers
                                     of shorebirds
• Marine                           • Diverse juvenile
  • High abundances of black         invertebrate fauna
    bream & salmon
  • High numbers of fishing
                                 • Degraded marine
    birds & small waders           • Too few cases to
  • High number of large             categorise using SIMPER
    polychaete worms
Key biota of hypersaline grouping
• Healthy hypersaline            • Unhealthy hypersaline
  • Diverse waders, many           • Some tolerant marine fish
    waterfowl, esp teal            • High numbers of banded stilt,
  • Few fish or invertebrate         many shorebirds
    data                           • Few invertebrates


• Average hypersaline            • Degraded hypersaline
  • Few fish present               • Many hardyheads
  • High numbers of waterfowl,     • Some waterfowl, few other
    some fishers                     birds
  • Many chironomids, few          • Almost no invertebrates
    other inverts
Community composition – birds,
fish and macrophytes
                                                       Standardise Samples by Total
                                                       Resemblance: S17 Bray Curtis similarity

                              01                                                        2D Stress: 0.17
                                                                                                          Murray Mouth
                                   01                                                                     North Lagoon
                         04
                                                                                                          South Lagoon
                                                  06
              06    01
        02 02 00 00        07
              01 00 00 00
                  04
             02 02 00 01 07             04        07
        03     03 0205 03                                   07
                    020502                    07
                                                                 06
         04 00 05 04 0000 01                                                 06
                  04                                   06             07
            04 0006 03 02                                                          05
        07 01 03 03                          07                            04 04         05
               02 0603 05 06                           07        05
          01 05 04       03                       06
                    02 03                                         06
          04                  00                                                   05
    07       02 02 01                                       04
       05    01 00       01 01
                    05
                    07

              06
                   06
         07
Hypersaline basin vectors
                                                 Improved in both                         Improved water levels but more days
                                                                                                    without flow
     Deviation in water level from




                                     +



                                     0
               Baseline




                                     -




                                         Fewer days without flow but lower
                                                                                                  Deterioration in both
                                                      levels
                                                      -                         0                              +
                                                        Deviation in days without barrage flow from Baseline
a) Historic Natural & Median Natural, b) Median Future, c) Dry Future & Median Future, +20cm
SLR, d) Dry Natural, e) Median Future, -10cm SLR, f) Median Future, +40cm SLR, g) Dry Future,
-10cm SLR, h) Dry Future, +20cm SLR, i) Dry Future, +40cm SLR, j) Historic TLM off, k) Historic
TLM on, l) Median TLM off, m) Median TLM on, n) Dry TLM off, o) Dry TLM on.
More key messages
• In the absence of barrage flows
  • dredging is essential
  • SLSRS would have a big short-term impact
     • channel works + pumping = best option for South
       Lagoon states
  • additional South East water would have a
    longer lasting impact
• But none are as effective as barrage flows

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CLLAMM Futures - CLLAMM technical briefing

  • 1. HEADLINE TO BE PLACED IN THIS SPACE CLLAMM Futures: Modelling ecosystem responses to future scenarios July 21st, 2009 Peter Fairweather & Rebecca Lester Flinders University
  • 2. Aims • To develop an ecosystem response model to predict future condition in the Coorong • To model various possible future scenarios: • how will climate change & management affect the ecosystem states of the Coorong? • Today: • a brief overview of approach & some of the key findings
  • 3. An ecosystem response model for the Coorong
  • 4. Variables included Biological Environmental • Bird abundances (UoA, DEH) • Flow parameters (MDBC) • Commercial fish CPUE • Volumes, rates (SARDI) • Lags from previous years • Fish abundances (SARDI) • Hydrology (CSIRO) • Macrobenthos abundances • Level above AHD, Depths (FU) • Tidal influence, Lags • Macrophyte prevalence • Meteorological (BoM) (UoA) • Water quality (CSIRO, DEH) • Salinity, [Nutrient], Turbidity
  • 5. Alternating data sets approach Biological Environmental 1. Identify clusters 2. Identify differing conditions 3. Confirm distinct states 4. Evaluate new cases 5. Characterise states
  • 6. Ecosystem States of the Coorong True False CLLAMMecology Hypersaline basin Marine basin
  • 7. What do these states look like? Estuarine/marine Degraded marine CLLAMMecology
  • 8. Environmental characteristics MM + NL SL DM EM M UM HH AH UH DH Low n Days since flow Flow volume Salinity Tidal influence [TKN] na [P] na Turbidity na ♦ Very low ♦ Low ♦ Med ♦ High ♦ Very high na = no data available
  • 9. Biological characteristics MM + NL SL DM EM M UM HH AH UH DH Low n Fishing birds Shorebirds Waterfowl Estuarine fish Marine fish Benthic inverts na Ruppia na na na ♦ Very low ♦ Low ♦ Med ♦ High ♦ Very high
  • 10. How is this modelling different? • Multivariate, not focussed upon a univariate response • Algorithm defined both states & thresholds • Used these to define transitions for predictions • Wanted to model perceived decline • Designed to include transitional states • Dataset did not allow equilibrium to be identified ∴ removed assumption of stability from model
  • 11. Management implications of ecosystem state approach • Simplifies definition of ecosystem condition per se • Allows management at ecosystem scale • not just indicator species or single parameters • not based on preconceptions • More flexible to manage for states than a focus on a single species or parameter
  • 13. Approach MDB SY Hydrodynami c model Ecosystem state model Water benefits Evaluation of Ramsar obligations scenarios Other measures of impact
  • 14. Scenario modelling • Climates from CSIRO Sustainable Yields for MDB project, benchmark = 2030 • Flows from MDBA via Ian Webster’s hydrodynamic model • 20 scenarios done, e.g.: • Baseline = historic climate + average in/outflows • Median Future = moderate climate • Dry Future = extreme climate • Extreme + 40cm SLR = extreme climate + SLR • Modelled 12 sites X 114 years = 1368 site-yr CLLAMMecology
  • 15. Changing ecosystem states CLLAMMecology
  • 16. How to read distribution of ecosystem states (e.g. Baseline) Sites on the y-axis Each site-year is colour coded Key to colours Years on the x-axis Training Blues & yellows data period are “healthy” while greens & purples/reds are “unhealthy” CLLAMMecology
  • 17. What does an ugly future look like? e.g. Dry Future CLLAMMecology
  • 18. Effect of climate & sea-level rise Scenario name Key to colours used = state name How to read this graph Blues & yellows are “healthy” while greens & reds are Percent of total “unhealthy” site-years in each CLLAMMecology state
  • 19. Effect of climate & extraction levels
  • 20. Effect of The Living Murray initiative
  • 21. Ordination of 20 scenarios 2D Stress: 0.04 Effect of Median Future, +40 cm SLR Alternative model Median Future, +20 cm SLR Sea-level rise Dry Future, +40 cm SLR The Living Murray Dry Future, +20 cm SLR Extraction level Historic Natural Climate change Median Natural Baseline Dry Natural Historic TLM off Dry TLM off Dry Future Median TLM off Historic TLM on Baseline Dry TLM on Median Future Dry Future, -10 cm SLR Median TLM on Median Future, -10 cm SLR MM Dredging Max USED Flows Alt baseline
  • 22. Summary of trends across scenarios • Baseline = a mix of healthy & degraded states • Future climates invoke more degraded states e.g. Baseline = 6%, Median Future = 11%, Dry Future = 46% • Sea-level rise alters mix but still ~45% • Degraded states involve little flow, higher salinities & a much reduced range of biota • ‘a future heading south’ = conditions like the South Lagoon become more common in both lagoons CLLAMMecology
  • 23. Key findings • Climate change has potential to dramatically affect ecosystem states in the Coorong • e.g. more degraded states: Baseline = 6%, Median Future = 11%,Dry Future = 46% • Extraction of water is exacerbating the problem • Even small amounts of environmental water can alleviate the worst effects of climate change • Nothing as good as water over the barrages
  • 24. Key messages • Climate change has the potential to devastate the Coorong • at current extraction levels • But relatively small amounts of water will mitigate the worst • e.g. TLM & other similar initiatives • Other interventions are less effective • but may be necessary before flows return
  • 25. Conclusions • No substitutes for barrage flows • Climate change does not have to destroy Coorong ecosystems • extraction levels play a much bigger role • Additional fresh water is needed • River Murray must be the major source
  • 26. HEADLINE TO BE PLACED IN Thank you THIS SPACE Acknowledgements • CLLAMMecology Research Cluster & CSIRO CLLAMM researchers (esp. for th datasets) • CSIRO Collaboration Fund • DEH, DWLBC, SA MDB NRM Board • FR3cE
  • 27. Spare slides for questions
  • 28. HEADLINE TO BE PLACED IN Recent rainfall THIS SPACE
  • 29. Ecosystem states • An explicit link sought between physical & biological data • driven by management requirements • Includes transitional states • no emphasis on stability • during decline & (potentially) recovery • Built as a state-&-transition model • usually defined by expert opinion • data-driven definition of each is also possible
  • 30. Defining states & transitions 1. Identify 2. Identify 3. Confirm clusters differing distinct states •Group cases conditions •Tests relationship •Become preliminary •Find environmental b/w biota & states transitions environment •Group average •Test model stability •Identifies distinct cluster analysis •CART analysis states •ANOSIM analysis 4. Evaluate new 5. Characterise cases states Biological data •Classifies test cases •Environmental & •Tests predictive biological Environmental capacity characteristics data •CART & ANOSIM •Indicator species analyses •SIMPER, BVStep, other analyses
  • 31. Long v Short time frames Long term Short term • Annual time step • Quarterly time step • 10 sites, 1999 – 2007 • 12 sites, 2005 – 2007 • 3 distinct states (86%) • 6 distinct states (66%) • Long-term analyses did not pick up recent deteriorations in condition • Long- & short- term models could be combined (61%) • One model with 8 distinct states
  • 32. Key biota of marine grouping • Estuarine/marine • Unhealthy marine • High abundances of • Good numbers of yellow- mulloway, flounder, black eyed mullet, hardyheads, bream some marine/estuarine • Good numbers of fishing species birds, small waders & teal • Good numbers of fishing • Diverse benthic fauna birds, moderate numbers of shorebirds • Marine • Diverse juvenile • High abundances of black invertebrate fauna bream & salmon • High numbers of fishing • Degraded marine birds & small waders • Too few cases to • High number of large categorise using SIMPER polychaete worms
  • 33. Key biota of hypersaline grouping • Healthy hypersaline • Unhealthy hypersaline • Diverse waders, many • Some tolerant marine fish waterfowl, esp teal • High numbers of banded stilt, • Few fish or invertebrate many shorebirds data • Few invertebrates • Average hypersaline • Degraded hypersaline • Few fish present • Many hardyheads • High numbers of waterfowl, • Some waterfowl, few other some fishers birds • Many chironomids, few • Almost no invertebrates other inverts
  • 34. Community composition – birds, fish and macrophytes Standardise Samples by Total Resemblance: S17 Bray Curtis similarity 01 2D Stress: 0.17 Murray Mouth 01 North Lagoon 04 South Lagoon 06 06 01 02 02 00 00 07 01 00 00 00 04 02 02 00 01 07 04 07 03 03 0205 03 07 020502 07 06 04 00 05 04 0000 01 06 04 06 07 04 0006 03 02 05 07 01 03 03 07 04 04 05 02 0603 05 06 07 05 01 05 04 03 06 02 03 06 04 00 05 07 02 02 01 04 05 01 00 01 01 05 07 06 06 07
  • 35. Hypersaline basin vectors Improved in both Improved water levels but more days without flow Deviation in water level from + 0 Baseline - Fewer days without flow but lower Deterioration in both levels - 0 + Deviation in days without barrage flow from Baseline a) Historic Natural & Median Natural, b) Median Future, c) Dry Future & Median Future, +20cm SLR, d) Dry Natural, e) Median Future, -10cm SLR, f) Median Future, +40cm SLR, g) Dry Future, -10cm SLR, h) Dry Future, +20cm SLR, i) Dry Future, +40cm SLR, j) Historic TLM off, k) Historic TLM on, l) Median TLM off, m) Median TLM on, n) Dry TLM off, o) Dry TLM on.
  • 36. More key messages • In the absence of barrage flows • dredging is essential • SLSRS would have a big short-term impact • channel works + pumping = best option for South Lagoon states • additional South East water would have a longer lasting impact • But none are as effective as barrage flows