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Antibacterial Agents: Synthesis of Cicadapeptins 
Professor Felix M. Rivas Rivera 
November 6, 2014 
CayeyP.R.
My StoryGraduated from UPR‐Cayeyin 1996How did I get here?
Education 
High School: Maestro Ladi, Vega Alta, Puerto Rico 
• 
Participated in Science Competitions 
• 
Took Extra Science and Math Courses 
Bachelor of Science in Chemistry: Universidad de Puerto Rico –Cayey 
• 
Participated in Undergraduate Research 
• 
Honors College 
• 
Undergraduate Thesis 
• 
President of Chemistry Club
Education (continued) 
Doctor of Philosophy in Chemistry: University of Buffalo –SUNY 
• 
Synthesis of Organic Molecules for use as Catalysts 
• 
Ford Foundation Pre‐Doctoral Fellowship 
Post‐Doctoral Studies in Medicinal Chemistry: University of Wisconsin –Milwaukee 
Synthesis of Organic Molecules for use as Anti‐Seizure AgentsNN
Real World (Education Continued!) 
Instructor of Organic Chemistry –Chicago State University 2006 
Assistant Professor of Chemistry –Chicago State University 2006 
Assistant Professor of Chemistry Tenured–Chicago State University 2012 
Associate Professor of Chemistry –Chicago State University 2013 
Department of Chemistry, Physics and Engineering Studies
Research Interests 
OClAnthocyanin(flavyliumion) OHHORR' 
Synthesis of Dyes for 
Dye Sensitized Solar Cells 
Synthesis of Antibacterial Agents 
NHHNNHHNNHHN NNONH2OOOOOOOR1R2HOHONH2O1:R1=CH3,R2=HCicadapeptinI2:R1=H,R2=CH3CicadapeptinII 
Synthesis of New Ligandsfor Organometallic 
Chemistry Catalyzed Organic Reactions
Example of Antibacterial Agents 
quinolone 
tetracycline 
penicillin 
Erythromycin
Antibacterial Agents: Synthesis of Cicadapeptins 
Abstract 
• 
Cicadapeptinsare short sequences of seven amino acidsisolated from the EntomopathogenicFungusCordycepsheteropoda.Among the unique amino acidspresent in Cicadapeptins are two aminoisobutyricacids and two hydroxyprolineamino acids.Preliminary studies showed that Cicadapeptins act as good antibacterial agentsagainstBacillus cereus,B. subtilis, andEscherichia coli.In agar disk/diffusion assays using 100 mg/disk, Cicadapeptins I and II produced clear kill zones againstBacillus cereus(12‐13 mm),B. subtilis(11‐13 mm), and Escherichia coli(16 mm).To further explore their antibacterial properties their synthesis was startedusing solid‐supported organic synthesis. A polystyrene‐based resin with 2‐chlorotrityl chloride as linker was used. Two fragments of three amino acids each were synthesized. The synthetic approach, experimental procedure and results will be presented.
Take home messages 
Synthesis of antibacterial peptide with unique amino acids 
A career as a researcher 
and/or professoris possible for
Cicadapeptins from Fungus that infects Cicadas
Cicadapeptins 
ƒ 
isolated from fungus on Cicadas 
ƒ 
short peptide 
ƒ 
α‐Helical structure 
ƒ 
unique amino acids 
ƒ 
antibacterial properties 
310‐helix side view 
310‐helix top view
Building!
Synthesis of Cicadapeptins 
NHHNNHHNNHHN NNONH2OOOOOOOR1R2HOHONH2OH2NHN NH H2NNH HN NNONH2OOOOOOOR1R2HOHONH2OOHOHFragmentAFragmentBFragmentC
Peptide Bond Formation 
HN OHFmocOH2NORO+ HN OROHN FmocONewBondMade+H2O 
HOMEWORK 
How does this reaction occur? 
How does your body performs this reaction a million times?
Synthesis of Fragment A 
HN OOH NH OOH HNOHDIPEA, CH2Cl2 HNNHHN OOFragmentA14HOBt,DIC,DMFFmocFmocHOBt,DIC,DMFFmocOresinFmocO HN OFmocOpiperidineH2NOOHN OONH OFmocpiperidineHN OOH2NOO
Synthesis of Fragment B 
NH OOHi) iii) 4,HOBt,DICDMF5Fmoc NHHNNH OOOO HN OFmocC(Ph)3ii)Piperidine(50%) NH OHO HNOH2NOO HN O2C(Ph)3FmocC(Ph)3DIPEA, CH2Cl2iiiPiperidine(50%) resinFragmentB
Experimental Procedure 
Solid Phase Synthesis 
• 
Solid Support 
• 
Solvents 
• 
Amino Acids 
• 
Coupling Reagents 
• 
Glassware 
• 
Reaction Monitoring 
• 
Purification Techniques 
• 
Instrumentation for Characterization
Future Work 
H2N HNNHHNNHHNNH OOOOOR1R2NH2OFragmentANNOOOFragmentBi)HOBt,DIC,DMF+NH HN NH OHOOONH2OFragmentA'' (WesternHemisphere) FmocHN NH HN OOR1R2FragmentA' (EasternHemisphere) FmocNH i)HOBt,DIC,DMFii)Piperidine(50%) OHOOii)removalfromsolidsupportandremovalofprotectinggroups(PG) PGPG 
CicadapeptinsI and II
Summary and take home messages 
Synthesis of antibacterial peptide with unique amino acids 
A career as a researcher 
and/or professoris possible for
Acknowledgements 
Department of Chemistry 
Physics and Engineering Studies 
Undergraduate Students 
ZandraFloyd 
George Howell
Alumni from Rivas Lab 
ValentinTorresB.S. Biology; Teacher at Chicago Public Schools 
ZandraFloydB.S. Chemistry; MS‐Chemistry IIT; Nuclear Chemist 
George HowellB.S. Chemistry; Working for Cargill 
Samuel NtrakwaB.S. Chemistry; MS‐Public Health Australia 
Laurence QuinnB.S. Chemistry; Chemist, Applying to Graduate Schools 
Charity BurgosB.S. Chemistry, Graduate student at Atlanta University 
Chirag ThakarB.S. Biology; Pharm. D. Ohio State Univ., Pharmacist at Ohio, US 
Kiel WashH.S. Morgan Academy High School, Engineering Major IIT 
Rachel HawkinsB.S. Chemistry; Working for Cargill 
Isabel AnayaB.S. Biology; Chicago State University, Senior Class 2015 
Horace JamesB.S. Chemistry; Chicago State University, Senior Class 2014 
Valencia KeysB.S. Psychology; Chicago State University, Senior Class 2015 
BriticeGoinsPre‐Pharm.; Pharmacy School at Chicago State University 
Veronica SmartB.S. Chemistry; Chicago State University, Senior Class 2016 
Patrick AdampteyB.S. Chemistry; Chicago State University, Senior Class 2016 
Alan ToledoB.S. Chemistry; Chicago State University, Senior Class 2015 
Ylse BenitezB.S. Biology; Chicago State University, Senior Class 2016
Other Students 
Bonnie GumkoskiM.S.; University of Illinois Dietetics Program 
Agnes KisaiApplying to Medical School 
SitatianRushM.S.; Rush University, Chicago 
Pablo GuzmanPh.D.; Emory University 
Tameka BarlettSummer Pre‐Dentistry Program 
Tabatha WilliamsMedical School Wisconsin Madison 
Luis RiveraMedical School 
Ruth OsborneUniversity of Illinois at Chicago PREP 
Katie StanislowskiPharmacy School Chicago State University
How to get whereI am now? Answer: A Lot of People Helped Me!
At Cayeythe Academic Side 
Dr. Robert Ross 
Ms. Rosita Baez 
Dr. MirthaTrujillo 
Dr. Luz E. Torres 
Dr. WilfredoResto 
Dr. MercedesRivera 
Dr. GenaroOrtiz 
Dr. JairoPardo 
Dr. Juan Estevez 
Dr. Edgar Llera 
Dr. Nestor Carballeira(UPR‐RP) 
Dr. Alba Reyes (Graduate Student) 
Dr. Mayra Pagan (Graduate Student) 
Dr. Carmen Umpierre 
All other Professors in the Sciences 
UPR‐CayeyHonors Program 
Dr. Angel Lopez (student) 
How to get whereI am now? Answer: A Lot of People Helped Me! 
At Cayeythe Non‐Academic Side 
MBRS Office Staff 
Dr. GlamarieBurgos (student) 
Students from Chemistry Club 
Students and faculty from BBB 
UPR‐CayeyHonors Program Staff
At SUNY Buffalo: 
Dr. Luis A Colon 
Dr. Steven T. Diver 
Dr. John Richard 
Ford Foundation Pre‐Doctoral 
Dr. GlamarieBurgos (student) 
Students at Steven T. Diver Lab 
At University of Wisconsin: 
Dr. James Cook 
Dr. Luis A. Colon 
Dr. GlamarieBurgos 
Students at James Cook Lab 
At Chicago State University: 
Dr. LeRoyJonesDr. Mel Sabella 
Dr. Luis A. ColonDr. Mike Mimnaugh 
Dr. David KanisDr. Mark E. Duban 
Dr. GlamarieBurgos Mr. IsmaelReyna 
Mr. Fernando DiazMs. Leticia Carillo 
Dr. Pablo Guzman Ford Foundation Senior Fellows 
I still need HELP!
It is OK to ask and accept HELP, 
you will need it! 
Take Home MessagePart II
Questions! 
Felix M. Rivas 
Email: frivas@csu.edu 
Text: 773‐977‐5012
Chicago

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Cayey november 6 2014

  • 1. Antibacterial Agents: Synthesis of Cicadapeptins Professor Felix M. Rivas Rivera November 6, 2014 CayeyP.R.
  • 2. My StoryGraduated from UPR‐Cayeyin 1996How did I get here?
  • 3. Education High School: Maestro Ladi, Vega Alta, Puerto Rico • Participated in Science Competitions • Took Extra Science and Math Courses Bachelor of Science in Chemistry: Universidad de Puerto Rico –Cayey • Participated in Undergraduate Research • Honors College • Undergraduate Thesis • President of Chemistry Club
  • 4. Education (continued) Doctor of Philosophy in Chemistry: University of Buffalo –SUNY • Synthesis of Organic Molecules for use as Catalysts • Ford Foundation Pre‐Doctoral Fellowship Post‐Doctoral Studies in Medicinal Chemistry: University of Wisconsin –Milwaukee Synthesis of Organic Molecules for use as Anti‐Seizure AgentsNN
  • 5. Real World (Education Continued!) Instructor of Organic Chemistry –Chicago State University 2006 Assistant Professor of Chemistry –Chicago State University 2006 Assistant Professor of Chemistry Tenured–Chicago State University 2012 Associate Professor of Chemistry –Chicago State University 2013 Department of Chemistry, Physics and Engineering Studies
  • 6. Research Interests OClAnthocyanin(flavyliumion) OHHORR' Synthesis of Dyes for Dye Sensitized Solar Cells Synthesis of Antibacterial Agents NHHNNHHNNHHN NNONH2OOOOOOOR1R2HOHONH2O1:R1=CH3,R2=HCicadapeptinI2:R1=H,R2=CH3CicadapeptinII Synthesis of New Ligandsfor Organometallic Chemistry Catalyzed Organic Reactions
  • 7. Example of Antibacterial Agents quinolone tetracycline penicillin Erythromycin
  • 8. Antibacterial Agents: Synthesis of Cicadapeptins Abstract • Cicadapeptinsare short sequences of seven amino acidsisolated from the EntomopathogenicFungusCordycepsheteropoda.Among the unique amino acidspresent in Cicadapeptins are two aminoisobutyricacids and two hydroxyprolineamino acids.Preliminary studies showed that Cicadapeptins act as good antibacterial agentsagainstBacillus cereus,B. subtilis, andEscherichia coli.In agar disk/diffusion assays using 100 mg/disk, Cicadapeptins I and II produced clear kill zones againstBacillus cereus(12‐13 mm),B. subtilis(11‐13 mm), and Escherichia coli(16 mm).To further explore their antibacterial properties their synthesis was startedusing solid‐supported organic synthesis. A polystyrene‐based resin with 2‐chlorotrityl chloride as linker was used. Two fragments of three amino acids each were synthesized. The synthetic approach, experimental procedure and results will be presented.
  • 9. Take home messages Synthesis of antibacterial peptide with unique amino acids A career as a researcher and/or professoris possible for
  • 10. Cicadapeptins from Fungus that infects Cicadas
  • 11. Cicadapeptins ƒ isolated from fungus on Cicadas ƒ short peptide ƒ α‐Helical structure ƒ unique amino acids ƒ antibacterial properties 310‐helix side view 310‐helix top view
  • 13. Synthesis of Cicadapeptins NHHNNHHNNHHN NNONH2OOOOOOOR1R2HOHONH2OH2NHN NH H2NNH HN NNONH2OOOOOOOR1R2HOHONH2OOHOHFragmentAFragmentBFragmentC
  • 14. Peptide Bond Formation HN OHFmocOH2NORO+ HN OROHN FmocONewBondMade+H2O HOMEWORK How does this reaction occur? How does your body performs this reaction a million times?
  • 15. Synthesis of Fragment A HN OOH NH OOH HNOHDIPEA, CH2Cl2 HNNHHN OOFragmentA14HOBt,DIC,DMFFmocFmocHOBt,DIC,DMFFmocOresinFmocO HN OFmocOpiperidineH2NOOHN OONH OFmocpiperidineHN OOH2NOO
  • 16. Synthesis of Fragment B NH OOHi) iii) 4,HOBt,DICDMF5Fmoc NHHNNH OOOO HN OFmocC(Ph)3ii)Piperidine(50%) NH OHO HNOH2NOO HN O2C(Ph)3FmocC(Ph)3DIPEA, CH2Cl2iiiPiperidine(50%) resinFragmentB
  • 17. Experimental Procedure Solid Phase Synthesis • Solid Support • Solvents • Amino Acids • Coupling Reagents • Glassware • Reaction Monitoring • Purification Techniques • Instrumentation for Characterization
  • 18. Future Work H2N HNNHHNNHHNNH OOOOOR1R2NH2OFragmentANNOOOFragmentBi)HOBt,DIC,DMF+NH HN NH OHOOONH2OFragmentA'' (WesternHemisphere) FmocHN NH HN OOR1R2FragmentA' (EasternHemisphere) FmocNH i)HOBt,DIC,DMFii)Piperidine(50%) OHOOii)removalfromsolidsupportandremovalofprotectinggroups(PG) PGPG CicadapeptinsI and II
  • 19. Summary and take home messages Synthesis of antibacterial peptide with unique amino acids A career as a researcher and/or professoris possible for
  • 20. Acknowledgements Department of Chemistry Physics and Engineering Studies Undergraduate Students ZandraFloyd George Howell
  • 21. Alumni from Rivas Lab ValentinTorresB.S. Biology; Teacher at Chicago Public Schools ZandraFloydB.S. Chemistry; MS‐Chemistry IIT; Nuclear Chemist George HowellB.S. Chemistry; Working for Cargill Samuel NtrakwaB.S. Chemistry; MS‐Public Health Australia Laurence QuinnB.S. Chemistry; Chemist, Applying to Graduate Schools Charity BurgosB.S. Chemistry, Graduate student at Atlanta University Chirag ThakarB.S. Biology; Pharm. D. Ohio State Univ., Pharmacist at Ohio, US Kiel WashH.S. Morgan Academy High School, Engineering Major IIT Rachel HawkinsB.S. Chemistry; Working for Cargill Isabel AnayaB.S. Biology; Chicago State University, Senior Class 2015 Horace JamesB.S. Chemistry; Chicago State University, Senior Class 2014 Valencia KeysB.S. Psychology; Chicago State University, Senior Class 2015 BriticeGoinsPre‐Pharm.; Pharmacy School at Chicago State University Veronica SmartB.S. Chemistry; Chicago State University, Senior Class 2016 Patrick AdampteyB.S. Chemistry; Chicago State University, Senior Class 2016 Alan ToledoB.S. Chemistry; Chicago State University, Senior Class 2015 Ylse BenitezB.S. Biology; Chicago State University, Senior Class 2016
  • 22. Other Students Bonnie GumkoskiM.S.; University of Illinois Dietetics Program Agnes KisaiApplying to Medical School SitatianRushM.S.; Rush University, Chicago Pablo GuzmanPh.D.; Emory University Tameka BarlettSummer Pre‐Dentistry Program Tabatha WilliamsMedical School Wisconsin Madison Luis RiveraMedical School Ruth OsborneUniversity of Illinois at Chicago PREP Katie StanislowskiPharmacy School Chicago State University
  • 23. How to get whereI am now? Answer: A Lot of People Helped Me!
  • 24. At Cayeythe Academic Side Dr. Robert Ross Ms. Rosita Baez Dr. MirthaTrujillo Dr. Luz E. Torres Dr. WilfredoResto Dr. MercedesRivera Dr. GenaroOrtiz Dr. JairoPardo Dr. Juan Estevez Dr. Edgar Llera Dr. Nestor Carballeira(UPR‐RP) Dr. Alba Reyes (Graduate Student) Dr. Mayra Pagan (Graduate Student) Dr. Carmen Umpierre All other Professors in the Sciences UPR‐CayeyHonors Program Dr. Angel Lopez (student) How to get whereI am now? Answer: A Lot of People Helped Me! At Cayeythe Non‐Academic Side MBRS Office Staff Dr. GlamarieBurgos (student) Students from Chemistry Club Students and faculty from BBB UPR‐CayeyHonors Program Staff
  • 25. At SUNY Buffalo: Dr. Luis A Colon Dr. Steven T. Diver Dr. John Richard Ford Foundation Pre‐Doctoral Dr. GlamarieBurgos (student) Students at Steven T. Diver Lab At University of Wisconsin: Dr. James Cook Dr. Luis A. Colon Dr. GlamarieBurgos Students at James Cook Lab At Chicago State University: Dr. LeRoyJonesDr. Mel Sabella Dr. Luis A. ColonDr. Mike Mimnaugh Dr. David KanisDr. Mark E. Duban Dr. GlamarieBurgos Mr. IsmaelReyna Mr. Fernando DiazMs. Leticia Carillo Dr. Pablo Guzman Ford Foundation Senior Fellows I still need HELP!
  • 26. It is OK to ask and accept HELP, you will need it! Take Home MessagePart II
  • 27. Questions! Felix M. Rivas Email: frivas@csu.edu Text: 773‐977‐5012