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The Effect of Ectopic Expression of elt-
  7 on C. elegans’ Chemosensation




             By Robert A. Sumner
             Mentor: Misty Riddle
Background


        http://en.wikipedia.org/wiki/C_elegans

• C. elegans is a model organism
   – Receptiveness to transgenes and RNAi
   – Known cell lineage
   – Known cellular anatomy
Endoderm cascade genes
                                                                                 During the
                                                                                 development of
                                                                                 the C. elegans’
                                                                                 endoderm, genes
                                                                                 are turned on in a
                                                                                 cascade to
                                                                                 promote the
                                                                                 specialization of
                                                                                 the endoderm
                                                                                 cells into intestinal
                                                                                 cells.

http://www.faculty.ucr.edu/~mmaduro/papers/Maduro%20and%20Rothman%20(2002).pdf
Ectopic ELT-7 activates elt-2::LacZ::GFP in
     neurons, skin, and the pharynx
                                            Pharynx




      Skin                        Neurons
The elt-7- expressing C. elegans also
            arrest as L1s.
                                    They stop
                                    developing
                                    as if they
                                    don’t have
                                    any food,
                                    even if
                                    there is
                                    food
                                    around
                                    them


         http://www.wormatlas.org
Could their chemosensation be affected?

   Agar Plate          • Collect hs-end-1 or
                         hs-elt-7 synchronized L1
                         larva
                       • Heat shock at 33°C for
                         15 minutes
                Food
                       • Transfer to middle line
                       • Count number of
                         worms on each side of
                         the plate after 24 hours
Positive Control: No food on plate
     Control          Experimental
Negative Control: Un-heat-shocked
             worms
     Control          Experimental
The number of worms on each hemisphere of
       the plate was then counted
                   The number of worms on
                   each hemisphere was
                   divided by the total
                   number of worms on the
                   plate; this number was
                   used to quantify the level
                   of attraction the C.
                   elegans had towards the
                   food on their plate
Ectopic ELT-7 and not END-1 leads to defects in
                 chemosensation
       Inducing     Heat      Food
        Factor     -shock
           END-1     No/Yes      No

           END-1     No          Yes

           END-1     Yes         Yes

           ELT-7    No/Yes       No
P<0.0001
           ELT-7     No          Yes

           ELT-7     Yes        Yes



                                      0.00       0.25       0.50        0.75        1.00
                                     Repulsion          No Preference          Attraction
Ectopic end-3 leads to lesser defects in
                      chemosensation
            IF     HS Food
           End-1   No    No
           End-1   Yes   No
           End-1   No    Yes
           End-1   Yes   Yes
           End-3   No    No
P<0.0001   End-3   Yes   No
           End-3   No    Yes
           End-3   Yes   Yes

                               0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1
                         Repulsion          No Preference         Attraction
3 Minute Heat-shock has similar effect on
       chemosensation to No Heat-shock
Inducing Heat    Food
 Factor -shock

ELT-7    0min     Yes


ELT-7    3Min      Yes


ELT-7    15min     Yes




                       0           0.5            1
                   Repulsion   No Preference   Attraction
No Significant Difference in Chemosensation After
                Allowing L1 C. elegans to Arrest

No Arrest END-1
No Arrest ELT-7
No Arrest End-3
Arrested END-1
Arrested ELT-7
Arrested End-3


                   0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1
                 Repulsion        No Preference        Attraction
Data suggests that the further along the gene
expressed is in gut development, the more the
     worms’ chemosensation is affected.

 Gene: Level of Attraction
 end-1: 0.98
 end-3: 0.73
 elt-7: 0.54
Future Directions
• Testing whether the elt-7 expression in the neurons or
  pharynx is damaging the worms’ chemosensation
• Seeing if a three-minute heat-shock is enough to
  simply express elt-7 but not reprogram the worms’
  pharyngeal cells
• Ectopically expressing elt-7 and other gut
  developmental genes in different worm stages
  (L2, L3, L4s, Adults) and seeing how it affects the
  worms
Acknowledgments
•   The Research Mentorship Program
•   My Mentor: Misty Riddle
•   Joel Rothman and the Rothman Lab
•   California Institute for Regenerative
    Medicine

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Andrew slides

  • 1. The Effect of Ectopic Expression of elt- 7 on C. elegans’ Chemosensation By Robert A. Sumner Mentor: Misty Riddle
  • 2. Background http://en.wikipedia.org/wiki/C_elegans • C. elegans is a model organism – Receptiveness to transgenes and RNAi – Known cell lineage – Known cellular anatomy
  • 3. Endoderm cascade genes During the development of the C. elegans’ endoderm, genes are turned on in a cascade to promote the specialization of the endoderm cells into intestinal cells. http://www.faculty.ucr.edu/~mmaduro/papers/Maduro%20and%20Rothman%20(2002).pdf
  • 4. Ectopic ELT-7 activates elt-2::LacZ::GFP in neurons, skin, and the pharynx Pharynx Skin Neurons
  • 5. The elt-7- expressing C. elegans also arrest as L1s. They stop developing as if they don’t have any food, even if there is food around them http://www.wormatlas.org
  • 6. Could their chemosensation be affected? Agar Plate • Collect hs-end-1 or hs-elt-7 synchronized L1 larva • Heat shock at 33°C for 15 minutes Food • Transfer to middle line • Count number of worms on each side of the plate after 24 hours
  • 7. Positive Control: No food on plate Control Experimental
  • 8. Negative Control: Un-heat-shocked worms Control Experimental
  • 9. The number of worms on each hemisphere of the plate was then counted The number of worms on each hemisphere was divided by the total number of worms on the plate; this number was used to quantify the level of attraction the C. elegans had towards the food on their plate
  • 10. Ectopic ELT-7 and not END-1 leads to defects in chemosensation Inducing Heat Food Factor -shock END-1 No/Yes No END-1 No Yes END-1 Yes Yes ELT-7 No/Yes No P<0.0001 ELT-7 No Yes ELT-7 Yes Yes 0.00 0.25 0.50 0.75 1.00 Repulsion No Preference Attraction
  • 11. Ectopic end-3 leads to lesser defects in chemosensation IF HS Food End-1 No No End-1 Yes No End-1 No Yes End-1 Yes Yes End-3 No No P<0.0001 End-3 Yes No End-3 No Yes End-3 Yes Yes 0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1 Repulsion No Preference Attraction
  • 12. 3 Minute Heat-shock has similar effect on chemosensation to No Heat-shock Inducing Heat Food Factor -shock ELT-7 0min Yes ELT-7 3Min Yes ELT-7 15min Yes 0 0.5 1 Repulsion No Preference Attraction
  • 13. No Significant Difference in Chemosensation After Allowing L1 C. elegans to Arrest No Arrest END-1 No Arrest ELT-7 No Arrest End-3 Arrested END-1 Arrested ELT-7 Arrested End-3 0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1 Repulsion No Preference Attraction
  • 14. Data suggests that the further along the gene expressed is in gut development, the more the worms’ chemosensation is affected. Gene: Level of Attraction end-1: 0.98 end-3: 0.73 elt-7: 0.54
  • 15. Future Directions • Testing whether the elt-7 expression in the neurons or pharynx is damaging the worms’ chemosensation • Seeing if a three-minute heat-shock is enough to simply express elt-7 but not reprogram the worms’ pharyngeal cells • Ectopically expressing elt-7 and other gut developmental genes in different worm stages (L2, L3, L4s, Adults) and seeing how it affects the worms
  • 16. Acknowledgments • The Research Mentorship Program • My Mentor: Misty Riddle • Joel Rothman and the Rothman Lab • California Institute for Regenerative Medicine

Editor's Notes

  1. Those are the organisms im working with through a microscope: C elegans.
  2. C elegans have been studied as a model organism for decades.
  3. Recently it was discovered thatWidespread overexpression of the gene, elt-7, which involved in gut development, causes production of elt-2, another gene involved in gut development, in places outside of the gut. Done by: Inserting transgene [HS::elt-7 ; elt-2::GFP] and heat-shock wormsRemarkable because: Fully developed cells of different lineages are expressing genes specific to endoderm (gut) development.
  4. Wehypothesised…Tested this by…Explain pictureQuantify the worms chemosensationWhat we expected and why
  5. We also set up some control groups
  6. Make sure your titles are consistent (bold, same size, ect) and it is END-3, not elt-3. Repulsion is spelled wrong
  7. Maybe add the P-values that you want to discuss on the graphs
  8. What are these numbers? Maybe you will explain further?
  9. Same as the ones you talk about in your discussion (ie testing if it is the neurons or the pharynx, testing other larval stages, ect)