SlideShare a Scribd company logo
CC BY-SA 4.0 International
curating an ecosystem of databases, standards and
policies to enable FAIR data and explore
community relationships
NBN 2022: National Biodiversity Network Conference
9 November 2022
@FAIRsharing_org
contact@fairsharing.org
10.25504/FAIRsharing.2abjs5
datareadiness.eng.ox.ac.uk
Allyson Lister, PhD
FAIRsharing Content and Community Lead;
Senior Knowledge Engineer;
ORCiD: 0000-0002-7702-4495
CC BY-SA 4.0 International
An informative and educational resource, and a service
FAIRsharing provides curated descriptions and relationship graphs of
standards, databases and policies in all disciplines
COMMUNITY STANDARDS
POLICIES
by funders, journals
and other organizations
DATABASES
including repositories
and knowledgebases
Identifiers
Terminologies Guidelines
Formats Metrics
CC BY-SA 4.0 International
Guides consumers to discover, select and use these resources with confidence
Helps producers to make their resources more visible, more widely adopted and cited
Promoting use and value of databases, standards, policies
Nearly 3800
resources
(Nov 2022)
repositories
standards
policies
CC BY-SA 4.0 International
Users, adopters, communities and working groups
Including:
An endorsed output of the
FAIRsharing WG
(since 2015):
A WG (since 2015) in:
Researchers in academia,
industry and government
Developers & curators of
resources and tools
Research data facilitators,
librarians, trainers
Society, unions
and community alliances
Journal publishers and
organisations with data policies
Funders and data
policy makers
A recommended resource in EOSC reports
Used by all stakeholder groups
https://fairsharing.org/communities
CC BY-SA 4.0 International
Providing relevant
information across the
entire research community
is a complex challenge
requiring a strong user
community
Relationships (among
resources and within the
user community) are at the
core of FAIRsharing’s
curation approaches
https://fairsharing.org/browse/subject
CC BY-SA 4.0 International
Relationships are key
POLICIES
by funders, journals
and other organizations
DATABASES
including repositories
and knowledgebases
COMMUNITY STANDARDS
Identifiers
Terminologies Guidelines
Formats Metrics
CC BY-SA 4.0 International
https://fairsharing.org/graph/3776
EU-funded BiCIKL Consortium
is curating entries in
FAIRsharing to structure
landscaping analysis of
adjacent infrastructures
https://bicikl-project.eu/
CC BY-SA 4.0 International
https://fairsharing.org/graph/1206
MINSEQE
https://fairsharing.org/graph/3776
EU-funded BiCIKL Consortium
is curating entries in
FAIRsharing to structure
landscaping analysis of
adjacent infrastructures
Traversal of the graph aids
resource discovery, gap
analysis and further targeted
outreach and engagement
CC BY-SA 4.0 International
Relationships with tool developers
ds-wizard.org
w3id.org/AmIFAIR
openaire.eu
fairshake.cloud
fairassist.org
POLICIES DATABASES
COMMUNITY STANDARDS
CC BY-SA 4.0 International
For FAIR evaluation, DMP and other tools/services
it provides a look-up service (via the API) for standards and repositories
For developers and users of FAIRness tests and indicators
it provides a searchable registry to describe and discover them
Relationships with tool developers
https://api.fairsharing.org
https://fairsharing.org/API_doc
Third-party tools and other clients
Authentication via
REST/JSON:
read and write
User interface
REST/JSON:
read and write
OAI-PMH:
read
CC BY-SA 4.0 International
Relationships with guidance and
standards developers
POLICIES DATABASES
COMMUNITY STANDARDS
faircookbook.elixir-europe.org
rdmkit.elixir-europe.org
doi.org/10.5281/zenodo.6281105 doi.org/10.5281/zenodo.4683794
https://scienceeurope.org/our-resources/practical-guide-to-t
he-international-alignment-of-research-data-management/
https://ec.europa.eu/research/participants/docs/h2020-funding-guide/cross-cut
ting-issues/open-access-data-management/data-management_en.htm
doi.org/10.5334/dsj-2020-005
CC BY-SA 4.0 International
Relationships with guidance and
standards developers
Dryad: https://doi.org/10.25504/FAIRsharing.wkggtx
CC BY-SA 4.0 International
Relationships with our community
POLICIES DATABASES
COMMUNITY STANDARDS
1143 Record maintainers and
20 community curators
URL: https://fairsharing.org/IVOA
Maintainers
Subjects
Collections developed by the community
doi.org/10.25504/FAIRsharing.iKa3Xm
doi.org/10.25504/FAIRsharing.zv11j3
CC BY-SA 4.0 International
Organisations
look for ways to
promote their work
search for related
infrastructures and
resources
Researchers / Research
Support Roles
look to FAIRsharing for
information on relevant
resources
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Relationships with our communities
CC BY-SA 4.0 International
Organisations
look for ways to
promote their work
search for related
infrastructures and
resources
Researchers / Research
Support Roles
look to FAIRsharing for
information on relevant
resources
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Relationships with our communities
CC BY-SA 4.0 International
Organisations
look for ways to
promote their work
search for related
infrastructures and
resources
Researchers / Research
Support Roles
look to FAIRsharing for
information on relevant
resources
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Maintainers / Community
Curators
showcase projects and reveals
hidden connections
enrich FAIRsharing content to
gain expertise and attribution
Relationships with our communities
CC BY-SA 4.0 International
Organisations
look for ways to
promote their work
search for related
infrastructures and
resources
Researchers / Research
Support Roles
look to FAIRsharing for
information on relevant
resources
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Maintainers / Community
Curators
showcase projects and reveals
hidden connections
enrich FAIRsharing content to
gain expertise and attribution
Relationships with our communities
Communities
Engagement with
FAIRsharing aids resource
discovery, gap analysis
and further targeted
outreach and
engagement
CC BY-SA 4.0 International
Organisations
look for ways to
promote their work
search for related
infrastructures and
resources
Researchers / Research
Support Roles
look to FAIRsharing for
information on relevant
resources
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Maintainers / Community
Curators
showcase projects and reveals
hidden connections
enrich FAIRsharing content to
gain expertise and attribution
Relationships with our communities
Communities
Engagement with
FAIRsharing aids resource
discovery, gap analysis
and further targeted
outreach and
engagement
FAIRsharing for communities
We help you customise your view of
FAIRsharing to declare and visualise the
standards and repositories you use
We promote your organisation and your
efforts as a maintainer/curator
We help you leverage wider knowledge,
share information, support open science and
connect infrastructures
CC BY-SA 4.0 International
GBIF
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Relationships with our communities
GBIF Use Case
GBIF wants to perform a landscape analysis of
infrastructures adjacent to them and to the BiCIKL
consortium.
GBIF Community Manager Kyle Copas asks
FAIRsharing if we can help, and joins us as a
Community Curator for Biodiversity
CC BY-SA 4.0 International
GBIF
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Relationships with our communities
GBIF Use Case
GBIF wants to perform a landscape analysis of
infrastructures adjacent to them and to the BiCIKL
consortium.
GBIF Community Manager Kyle Copas asks
FAIRsharing if we can help, and joins us as a
Community Curator for Biodiversity
CC BY-SA 4.0 International
GBIF
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Relationships with our communities
GBIF Use Case
GBIF wants to perform a landscape analysis of
infrastructures adjacent to them and to the BiCIKL
consortium.
GBIF Community Manager Kyle Copas asks
FAIRsharing if we can help, and joins us as a
Community Curator for Biodiversity
Kyle gains personal attribution and expertise as a
result of his efforts
CC BY-SA 4.0 International
GBIF
FAIRsharing
relationships showcase
projects and reveal
hidden connections
Relationships with our communities
Associated
Communities
GBIF Use Case
GBIF wants to perform a landscape analysis of
infrastructures adjacent to them and to the BiCIKL
consortium.
GBIF Community Manager Kyle Copas asks
FAIRsharing if we can help, and joins us as a
Community Curator for Biodiversity
Kyle gains personal attribution and expertise as a
result of his efforts
His role as a Community Curator promotes the
work of GBIF by enriching FAIRsharing content,
revealing connections that they weren't aware of
going into the collaboration/project
CC BY-SA 4.0 International
Tailored views for education and promotion
Collections are are branded pages that group selected standards and/or repositories
Initiatives and projects have created them for several purposes, e.g. to list resources:
URL: https://fairsharing.org/CrosswalkOfMostUsedMetadataSchemesAndGuidelines
Maintainers
Subjects
Mapped to each other
URL: https://fairsharing.org/RDACovid19WG
Maintainers
Subjects
Recommended by a community
URL: https://fairsharing.org/IVOA
Maintainers
Subjects
Developed by the community
URL: https://fairsharing.org/CDISC
Maintainers
Subjects
Developed by a SDO
CC BY-SA 4.0 International
Linking associated data resources,
standards and policies
Organization and user
attribution
CC BY-SA 4.0 International
https://fairsharing.org/graph/3776
EU-funded BiCIKL Consortium
is curating entries in
FAIRsharing to structure
landscaping analysis of
adjacent infrastructures
https://bicikl-project.eu/
CC BY-SA 4.0 International
https://fairsharing.org/graph/3776
EU-funded BiCIKL Consortium
is curating entries in
FAIRsharing to structure
landscaping analysis of
adjacent infrastructures
https://bicikl-project.eu/
CC BY-SA 4.0 International
FAIRsharing Community Curator Programme
● Gain on-the-job curation
expertise
● Engagement and networking
with a community of
like-minded people
● Become an expert on data and
metadata standards,
repositories and data policies in
their area
● Influence new FAIRsharing
functionalities
● Attribution via ORCID, specialist
user profiles, and others
Curate – Influence – Gain Attribution – Engage – Learn
fairsharing.org/community_curation
CC BY-SA 4.0 International
Stakeholder Advisors
● Amye Kenall, Research Square
● Adam Leary, Oxford University Press
● Catriona MacCallum, Hindawi
● Dagmar Meyer, European Research Council, Executive Agency
● Dominic Fripp, JISC
● Emma Ganley, Protocols.io
● Geraldine Clement-Stoneham, Medical Research Council
● Helena Cousijn, DataCite
● Lauren Cadwallader, PLoS
● Imma Subirats, FAO of the United Nations
● Kiera McNiece, Cambridge University Press
● Luiz Olavo Bonino, GO-FAIR
● Lorenzo Feri and Sarah Callaghan, Elsevier
● Michael Ball, Medical Research Council
● Mike Huerta, NIH National Library of Medicine
● Molly Cranston and Guillaume Wright, F1000Research
● Nick Everitt and Matthew Cannon, Taylor and Francis
● Sarah Stewart, Bodleian Libraries, University of Oxford
● Scott Edmunds, GigaScience, Oxford University Press
● Simon Hodson, CODATA
● Theo Bloom, British Medical Journal
● Thomas Lemberger, EMBO Press
● Wei-Mun Chan, eLife
● Sowmya Swaminathan, Springer Nature
● Marta Teperek, TUDelft
Current Operational Team
● Allyson Lister, Content and Community Lead
● Milo Thurston, Technical Lead
● Ramon Granell, Data Enrichment & Quality Manager
● Delphine Dauga, Data Curator Manager
● Prakhyat Gailani, Web Developer
● Dominique Batista, Research Software Engineer
● Philippe Rocca-Serra, Co-Founder
● Susanna-Assunta Sansone, PI and Founder
● and many collaborators and contributors!
Executive Advisors
● Chris Graf, Springer Nature
● David Carr, Independent expert
● Peter McQuilton, (FAIRsharing Founding Member), GSK
● Robert Hanisch, National Institute of Standards and Technology
● Varsha Khodiyar, Independent Expert
Community Curators
https://fairsharing.org/community_curation/our_curators
Thank you!

More Related Content

Similar to 2022-11-09 National Biodiversity Network Conference - FAIRsharing and Biodiversity.pdf

Making Repositories FAIR (via metadata in FAIRsharing.org
Making Repositories FAIR (via metadata in FAIRsharing.orgMaking Repositories FAIR (via metadata in FAIRsharing.org
Making Repositories FAIR (via metadata in FAIRsharing.orgPeter McQuilton
 
FAIRsharing and DataCite: Data Repository Selection- Criteria That Matter
FAIRsharing and DataCite: Data Repository Selection- Criteria That MatterFAIRsharing and DataCite: Data Repository Selection- Criteria That Matter
FAIRsharing and DataCite: Data Repository Selection- Criteria That MatterSusanna-Assunta Sansone
 
FAIRsharing: more than a registry
FAIRsharing: more than a registryFAIRsharing: more than a registry
FAIRsharing: more than a registryPeter McQuilton
 
FAIRsharing - ENVRI-FAIR Webinar
FAIRsharing - ENVRI-FAIR WebinarFAIRsharing - ENVRI-FAIR Webinar
FAIRsharing - ENVRI-FAIR WebinarPeter McQuilton
 
CIARD Información accesible para todos (Inglés)
CIARD Información accesible para todos (Inglés)CIARD Información accesible para todos (Inglés)
CIARD Información accesible para todos (Inglés)RIBDA 2009
 
2010-05 CIARD Detailed Presentation - English
2010-05 CIARD Detailed Presentation - English2010-05 CIARD Detailed Presentation - English
2010-05 CIARD Detailed Presentation - EnglishCIARD
 
FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024
FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024
FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024Susanna-Assunta Sansone
 
FAIRsharing: what we do for policies
FAIRsharing: what we do for policiesFAIRsharing: what we do for policies
FAIRsharing: what we do for policiesAllyson Lister
 
2010-05 CIARD General Presentation - English -v2.0
2010-05 CIARD General Presentation - English -v2.02010-05 CIARD General Presentation - English -v2.0
2010-05 CIARD General Presentation - English -v2.0CIARD
 
Rda in a_nutshell_february_2017_updated
Rda in a_nutshell_february_2017_updatedRda in a_nutshell_february_2017_updated
Rda in a_nutshell_february_2017_updatedResearch Data Alliance
 
Research Data Alliance Member Statistics December 2015
Research Data Alliance Member Statistics December 2015Research Data Alliance Member Statistics December 2015
Research Data Alliance Member Statistics December 2015Research Data Alliance
 
Coherence in Information for Agricultural Research for Development
Coherence in Information for Agricultural Research for DevelopmentCoherence in Information for Agricultural Research for Development
Coherence in Information for Agricultural Research for Developmentiaaldafrika
 
Research Data Alliance Member Statistics January 2016
Research Data Alliance Member Statistics January 2016Research Data Alliance Member Statistics January 2016
Research Data Alliance Member Statistics January 2016Research Data Alliance
 
Monthly statistics of the RDA community - February 2016
Monthly statistics of the RDA community - February 2016Monthly statistics of the RDA community - February 2016
Monthly statistics of the RDA community - February 2016Research Data Alliance
 
Creative Commons Open Education Conference 2012
Creative Commons Open Education Conference 2012Creative Commons Open Education Conference 2012
Creative Commons Open Education Conference 2012Paul_Stacey
 

Similar to 2022-11-09 National Biodiversity Network Conference - FAIRsharing and Biodiversity.pdf (20)

FAIRsharing & FAIRcookbook at RDA 2023
FAIRsharing & FAIRcookbook at RDA 2023FAIRsharing & FAIRcookbook at RDA 2023
FAIRsharing & FAIRcookbook at RDA 2023
 
Making Repositories FAIR (via metadata in FAIRsharing.org
Making Repositories FAIR (via metadata in FAIRsharing.orgMaking Repositories FAIR (via metadata in FAIRsharing.org
Making Repositories FAIR (via metadata in FAIRsharing.org
 
FAIRsharing and DataCite: Data Repository Selection- Criteria That Matter
FAIRsharing and DataCite: Data Repository Selection- Criteria That MatterFAIRsharing and DataCite: Data Repository Selection- Criteria That Matter
FAIRsharing and DataCite: Data Repository Selection- Criteria That Matter
 
FAIRsharing: more than a registry
FAIRsharing: more than a registryFAIRsharing: more than a registry
FAIRsharing: more than a registry
 
FAIRsharing - ENVRI-FAIR Webinar
FAIRsharing - ENVRI-FAIR WebinarFAIRsharing - ENVRI-FAIR Webinar
FAIRsharing - ENVRI-FAIR Webinar
 
FAIRsharing: what we do for policies
FAIRsharing: what we do for policiesFAIRsharing: what we do for policies
FAIRsharing: what we do for policies
 
CIARD Información accesible para todos (Inglés)
CIARD Información accesible para todos (Inglés)CIARD Información accesible para todos (Inglés)
CIARD Información accesible para todos (Inglés)
 
2010-05 CIARD Detailed Presentation - English
2010-05 CIARD Detailed Presentation - English2010-05 CIARD Detailed Presentation - English
2010-05 CIARD Detailed Presentation - English
 
FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024
FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024
FAIR, FAIRsharing, FAIR Cookbook and ELIXIR - Sansone SA - Boston 2024
 
FAIRsharing: what we do for policies
FAIRsharing: what we do for policiesFAIRsharing: what we do for policies
FAIRsharing: what we do for policies
 
CIARD
CIARDCIARD
CIARD
 
2010-05 CIARD General Presentation - English -v2.0
2010-05 CIARD General Presentation - English -v2.02010-05 CIARD General Presentation - English -v2.0
2010-05 CIARD General Presentation - English -v2.0
 
FAIRsharing for RDA Funders Forum
FAIRsharing for RDA Funders ForumFAIRsharing for RDA Funders Forum
FAIRsharing for RDA Funders Forum
 
Rda in a_nutshell_february_2017_updated
Rda in a_nutshell_february_2017_updatedRda in a_nutshell_february_2017_updated
Rda in a_nutshell_february_2017_updated
 
Research Data Alliance Member Statistics December 2015
Research Data Alliance Member Statistics December 2015Research Data Alliance Member Statistics December 2015
Research Data Alliance Member Statistics December 2015
 
Coherence in Information for Agricultural Research for Development
Coherence in Information for Agricultural Research for DevelopmentCoherence in Information for Agricultural Research for Development
Coherence in Information for Agricultural Research for Development
 
Research Data Alliance Member Statistics January 2016
Research Data Alliance Member Statistics January 2016Research Data Alliance Member Statistics January 2016
Research Data Alliance Member Statistics January 2016
 
Monthly statistics of the RDA community - February 2016
Monthly statistics of the RDA community - February 2016Monthly statistics of the RDA community - February 2016
Monthly statistics of the RDA community - February 2016
 
Rda in a_nutshell_november2016
Rda in a_nutshell_november2016Rda in a_nutshell_november2016
Rda in a_nutshell_november2016
 
Creative Commons Open Education Conference 2012
Creative Commons Open Education Conference 2012Creative Commons Open Education Conference 2012
Creative Commons Open Education Conference 2012
 

More from Allyson Lister

Working with Genes: Introduction to DNA, Genes and Genetics
Working with Genes: Introduction to DNA, Genes and GeneticsWorking with Genes: Introduction to DNA, Genes and Genetics
Working with Genes: Introduction to DNA, Genes and GeneticsAllyson Lister
 
FAIRsharing: curation and governance of an ecosystem of research standards an...
FAIRsharing: curation and governance of an ecosystem of research standards an...FAIRsharing: curation and governance of an ecosystem of research standards an...
FAIRsharing: curation and governance of an ecosystem of research standards an...Allyson Lister
 
EOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdf
EOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdfEOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdf
EOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdfAllyson Lister
 
Introduction to DNA for Key Stage 2 (KS2)
Introduction to DNA for Key Stage 2 (KS2)Introduction to DNA for Key Stage 2 (KS2)
Introduction to DNA for Key Stage 2 (KS2)Allyson Lister
 
Systems Biology Model Semantics and Integration
Systems Biology Model Semantics and IntegrationSystems Biology Model Semantics and Integration
Systems Biology Model Semantics and IntegrationAllyson Lister
 
Saint: A Lightweight Model Annotation and Data Integration Tool
Saint: A Lightweight Model Annotation and Data Integration ToolSaint: A Lightweight Model Annotation and Data Integration Tool
Saint: A Lightweight Model Annotation and Data Integration ToolAllyson Lister
 
Annotation of SBML Models Through Rule-Based Semantic Integration
Annotation of SBML Models Through Rule-Based Semantic IntegrationAnnotation of SBML Models Through Rule-Based Semantic Integration
Annotation of SBML Models Through Rule-Based Semantic IntegrationAllyson Lister
 
Working with Genes: A Presentation for Children (Key Stages 1 and 2)
Working with Genes: A Presentation for Children (Key Stages 1 and 2)Working with Genes: A Presentation for Children (Key Stages 1 and 2)
Working with Genes: A Presentation for Children (Key Stages 1 and 2)Allyson Lister
 

More from Allyson Lister (10)

DNA & Genes KS2
DNA & Genes KS2DNA & Genes KS2
DNA & Genes KS2
 
Working with Genes: Introduction to DNA, Genes and Genetics
Working with Genes: Introduction to DNA, Genes and GeneticsWorking with Genes: Introduction to DNA, Genes and Genetics
Working with Genes: Introduction to DNA, Genes and Genetics
 
FAIRsharing: curation and governance of an ecosystem of research standards an...
FAIRsharing: curation and governance of an ecosystem of research standards an...FAIRsharing: curation and governance of an ecosystem of research standards an...
FAIRsharing: curation and governance of an ecosystem of research standards an...
 
EOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdf
EOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdfEOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdf
EOSC-Life AGM 2022 Publishing FAIR RI data resources in EOSC.pdf
 
Introduction to DNA for Key Stage 2 (KS2)
Introduction to DNA for Key Stage 2 (KS2)Introduction to DNA for Key Stage 2 (KS2)
Introduction to DNA for Key Stage 2 (KS2)
 
Systems Biology Model Semantics and Integration
Systems Biology Model Semantics and IntegrationSystems Biology Model Semantics and Integration
Systems Biology Model Semantics and Integration
 
Saint: A Lightweight Model Annotation and Data Integration Tool
Saint: A Lightweight Model Annotation and Data Integration ToolSaint: A Lightweight Model Annotation and Data Integration Tool
Saint: A Lightweight Model Annotation and Data Integration Tool
 
Annotation of SBML Models Through Rule-Based Semantic Integration
Annotation of SBML Models Through Rule-Based Semantic IntegrationAnnotation of SBML Models Through Rule-Based Semantic Integration
Annotation of SBML Models Through Rule-Based Semantic Integration
 
Working with Genes: A Presentation for Children (Key Stages 1 and 2)
Working with Genes: A Presentation for Children (Key Stages 1 and 2)Working with Genes: A Presentation for Children (Key Stages 1 and 2)
Working with Genes: A Presentation for Children (Key Stages 1 and 2)
 
SyMBA: Overview
SyMBA: OverviewSyMBA: Overview
SyMBA: Overview
 

Recently uploaded

BLOOD AND BLOOD COMPONENT- introduction to blood physiology
BLOOD AND BLOOD COMPONENT- introduction to blood physiologyBLOOD AND BLOOD COMPONENT- introduction to blood physiology
BLOOD AND BLOOD COMPONENT- introduction to blood physiologyNoelManyise1
 
FAIR & AI Ready KGs for Explainable Predictions
FAIR & AI Ready KGs for Explainable PredictionsFAIR & AI Ready KGs for Explainable Predictions
FAIR & AI Ready KGs for Explainable PredictionsMichel Dumontier
 
GBSN - Biochemistry (Unit 5) Chemistry of Lipids
GBSN - Biochemistry (Unit 5) Chemistry of LipidsGBSN - Biochemistry (Unit 5) Chemistry of Lipids
GBSN - Biochemistry (Unit 5) Chemistry of LipidsAreesha Ahmad
 
RNA INTERFERENCE: UNRAVELING GENETIC SILENCING
RNA INTERFERENCE: UNRAVELING GENETIC SILENCINGRNA INTERFERENCE: UNRAVELING GENETIC SILENCING
RNA INTERFERENCE: UNRAVELING GENETIC SILENCINGAADYARAJPANDEY1
 
Topography and sediments of the floor of the Bay of Bengal
Topography and sediments of the floor of the Bay of BengalTopography and sediments of the floor of the Bay of Bengal
Topography and sediments of the floor of the Bay of BengalMd Hasan Tareq
 
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...Subhajit Sahu
 
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
 
platelets- lifespan -Clot retraction-disorders.pptx
platelets- lifespan -Clot retraction-disorders.pptxplatelets- lifespan -Clot retraction-disorders.pptx
platelets- lifespan -Clot retraction-disorders.pptxmuralinath2
 
Lab report on liquid viscosity of glycerin
Lab report on liquid viscosity of glycerinLab report on liquid viscosity of glycerin
Lab report on liquid viscosity of glycerinossaicprecious19
 
GLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptx
GLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptxGLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptx
GLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptxSultanMuhammadGhauri
 
Predicting property prices with machine learning algorithms.pdf
Predicting property prices with machine learning algorithms.pdfPredicting property prices with machine learning algorithms.pdf
Predicting property prices with machine learning algorithms.pdfbinhminhvu04
 
Mammalian Pineal Body Structure and Also Functions
Mammalian Pineal Body Structure and Also FunctionsMammalian Pineal Body Structure and Also Functions
Mammalian Pineal Body Structure and Also FunctionsYOGESH DOGRA
 
Pests of Green Manures_Bionomics_IPM_Dr.UPR.pdf
Pests of Green Manures_Bionomics_IPM_Dr.UPR.pdfPests of Green Manures_Bionomics_IPM_Dr.UPR.pdf
Pests of Green Manures_Bionomics_IPM_Dr.UPR.pdfPirithiRaju
 
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...Sérgio Sacani
 
The ASGCT Annual Meeting was packed with exciting progress in the field advan...
The ASGCT Annual Meeting was packed with exciting progress in the field advan...The ASGCT Annual Meeting was packed with exciting progress in the field advan...
The ASGCT Annual Meeting was packed with exciting progress in the field advan...Health Advances
 
In silico drugs analogue design: novobiocin analogues.pptx
In silico drugs analogue design: novobiocin analogues.pptxIn silico drugs analogue design: novobiocin analogues.pptx
In silico drugs analogue design: novobiocin analogues.pptxAlaminAfendy1
 
Pests of sugarcane_Binomics_IPM_Dr.UPR.pdf
Pests of sugarcane_Binomics_IPM_Dr.UPR.pdfPests of sugarcane_Binomics_IPM_Dr.UPR.pdf
Pests of sugarcane_Binomics_IPM_Dr.UPR.pdfPirithiRaju
 
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
 
Structures and textures of metamorphic rocks
Structures and textures of metamorphic rocksStructures and textures of metamorphic rocks
Structures and textures of metamorphic rockskumarmathi863
 
ESR_factors_affect-clinic significance-Pathysiology.pptx
ESR_factors_affect-clinic significance-Pathysiology.pptxESR_factors_affect-clinic significance-Pathysiology.pptx
ESR_factors_affect-clinic significance-Pathysiology.pptxmuralinath2
 

Recently uploaded (20)

BLOOD AND BLOOD COMPONENT- introduction to blood physiology
BLOOD AND BLOOD COMPONENT- introduction to blood physiologyBLOOD AND BLOOD COMPONENT- introduction to blood physiology
BLOOD AND BLOOD COMPONENT- introduction to blood physiology
 
FAIR & AI Ready KGs for Explainable Predictions
FAIR & AI Ready KGs for Explainable PredictionsFAIR & AI Ready KGs for Explainable Predictions
FAIR & AI Ready KGs for Explainable Predictions
 
GBSN - Biochemistry (Unit 5) Chemistry of Lipids
GBSN - Biochemistry (Unit 5) Chemistry of LipidsGBSN - Biochemistry (Unit 5) Chemistry of Lipids
GBSN - Biochemistry (Unit 5) Chemistry of Lipids
 
RNA INTERFERENCE: UNRAVELING GENETIC SILENCING
RNA INTERFERENCE: UNRAVELING GENETIC SILENCINGRNA INTERFERENCE: UNRAVELING GENETIC SILENCING
RNA INTERFERENCE: UNRAVELING GENETIC SILENCING
 
Topography and sediments of the floor of the Bay of Bengal
Topography and sediments of the floor of the Bay of BengalTopography and sediments of the floor of the Bay of Bengal
Topography and sediments of the floor of the Bay of Bengal
 
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...
word2vec, node2vec, graph2vec, X2vec: Towards a Theory of Vector Embeddings o...
 
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...
 
platelets- lifespan -Clot retraction-disorders.pptx
platelets- lifespan -Clot retraction-disorders.pptxplatelets- lifespan -Clot retraction-disorders.pptx
platelets- lifespan -Clot retraction-disorders.pptx
 
Lab report on liquid viscosity of glycerin
Lab report on liquid viscosity of glycerinLab report on liquid viscosity of glycerin
Lab report on liquid viscosity of glycerin
 
GLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptx
GLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptxGLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptx
GLOBAL AND LOCAL SCENARIO OF FOOD AND NUTRITION.pptx
 
Predicting property prices with machine learning algorithms.pdf
Predicting property prices with machine learning algorithms.pdfPredicting property prices with machine learning algorithms.pdf
Predicting property prices with machine learning algorithms.pdf
 
Mammalian Pineal Body Structure and Also Functions
Mammalian Pineal Body Structure and Also FunctionsMammalian Pineal Body Structure and Also Functions
Mammalian Pineal Body Structure and Also Functions
 
Pests of Green Manures_Bionomics_IPM_Dr.UPR.pdf
Pests of Green Manures_Bionomics_IPM_Dr.UPR.pdfPests of Green Manures_Bionomics_IPM_Dr.UPR.pdf
Pests of Green Manures_Bionomics_IPM_Dr.UPR.pdf
 
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...
Gliese 12 b, a temperate Earth-sized planet at 12 parsecs discovered with TES...
 
The ASGCT Annual Meeting was packed with exciting progress in the field advan...
The ASGCT Annual Meeting was packed with exciting progress in the field advan...The ASGCT Annual Meeting was packed with exciting progress in the field advan...
The ASGCT Annual Meeting was packed with exciting progress in the field advan...
 
In silico drugs analogue design: novobiocin analogues.pptx
In silico drugs analogue design: novobiocin analogues.pptxIn silico drugs analogue design: novobiocin analogues.pptx
In silico drugs analogue design: novobiocin analogues.pptx
 
Pests of sugarcane_Binomics_IPM_Dr.UPR.pdf
Pests of sugarcane_Binomics_IPM_Dr.UPR.pdfPests of sugarcane_Binomics_IPM_Dr.UPR.pdf
Pests of sugarcane_Binomics_IPM_Dr.UPR.pdf
 
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...
 
Structures and textures of metamorphic rocks
Structures and textures of metamorphic rocksStructures and textures of metamorphic rocks
Structures and textures of metamorphic rocks
 
ESR_factors_affect-clinic significance-Pathysiology.pptx
ESR_factors_affect-clinic significance-Pathysiology.pptxESR_factors_affect-clinic significance-Pathysiology.pptx
ESR_factors_affect-clinic significance-Pathysiology.pptx
 

2022-11-09 National Biodiversity Network Conference - FAIRsharing and Biodiversity.pdf

  • 1. CC BY-SA 4.0 International curating an ecosystem of databases, standards and policies to enable FAIR data and explore community relationships NBN 2022: National Biodiversity Network Conference 9 November 2022 @FAIRsharing_org contact@fairsharing.org 10.25504/FAIRsharing.2abjs5 datareadiness.eng.ox.ac.uk Allyson Lister, PhD FAIRsharing Content and Community Lead; Senior Knowledge Engineer; ORCiD: 0000-0002-7702-4495
  • 2. CC BY-SA 4.0 International An informative and educational resource, and a service FAIRsharing provides curated descriptions and relationship graphs of standards, databases and policies in all disciplines COMMUNITY STANDARDS POLICIES by funders, journals and other organizations DATABASES including repositories and knowledgebases Identifiers Terminologies Guidelines Formats Metrics
  • 3. CC BY-SA 4.0 International Guides consumers to discover, select and use these resources with confidence Helps producers to make their resources more visible, more widely adopted and cited Promoting use and value of databases, standards, policies Nearly 3800 resources (Nov 2022) repositories standards policies
  • 4. CC BY-SA 4.0 International Users, adopters, communities and working groups Including: An endorsed output of the FAIRsharing WG (since 2015): A WG (since 2015) in: Researchers in academia, industry and government Developers & curators of resources and tools Research data facilitators, librarians, trainers Society, unions and community alliances Journal publishers and organisations with data policies Funders and data policy makers A recommended resource in EOSC reports Used by all stakeholder groups https://fairsharing.org/communities
  • 5. CC BY-SA 4.0 International Providing relevant information across the entire research community is a complex challenge requiring a strong user community Relationships (among resources and within the user community) are at the core of FAIRsharing’s curation approaches https://fairsharing.org/browse/subject
  • 6. CC BY-SA 4.0 International Relationships are key POLICIES by funders, journals and other organizations DATABASES including repositories and knowledgebases COMMUNITY STANDARDS Identifiers Terminologies Guidelines Formats Metrics
  • 7. CC BY-SA 4.0 International https://fairsharing.org/graph/3776 EU-funded BiCIKL Consortium is curating entries in FAIRsharing to structure landscaping analysis of adjacent infrastructures https://bicikl-project.eu/
  • 8. CC BY-SA 4.0 International https://fairsharing.org/graph/1206 MINSEQE https://fairsharing.org/graph/3776 EU-funded BiCIKL Consortium is curating entries in FAIRsharing to structure landscaping analysis of adjacent infrastructures Traversal of the graph aids resource discovery, gap analysis and further targeted outreach and engagement
  • 9. CC BY-SA 4.0 International Relationships with tool developers ds-wizard.org w3id.org/AmIFAIR openaire.eu fairshake.cloud fairassist.org POLICIES DATABASES COMMUNITY STANDARDS
  • 10. CC BY-SA 4.0 International For FAIR evaluation, DMP and other tools/services it provides a look-up service (via the API) for standards and repositories For developers and users of FAIRness tests and indicators it provides a searchable registry to describe and discover them Relationships with tool developers https://api.fairsharing.org https://fairsharing.org/API_doc Third-party tools and other clients Authentication via REST/JSON: read and write User interface REST/JSON: read and write OAI-PMH: read
  • 11. CC BY-SA 4.0 International Relationships with guidance and standards developers POLICIES DATABASES COMMUNITY STANDARDS faircookbook.elixir-europe.org rdmkit.elixir-europe.org doi.org/10.5281/zenodo.6281105 doi.org/10.5281/zenodo.4683794 https://scienceeurope.org/our-resources/practical-guide-to-t he-international-alignment-of-research-data-management/ https://ec.europa.eu/research/participants/docs/h2020-funding-guide/cross-cut ting-issues/open-access-data-management/data-management_en.htm doi.org/10.5334/dsj-2020-005
  • 12. CC BY-SA 4.0 International Relationships with guidance and standards developers Dryad: https://doi.org/10.25504/FAIRsharing.wkggtx
  • 13. CC BY-SA 4.0 International Relationships with our community POLICIES DATABASES COMMUNITY STANDARDS 1143 Record maintainers and 20 community curators URL: https://fairsharing.org/IVOA Maintainers Subjects Collections developed by the community doi.org/10.25504/FAIRsharing.iKa3Xm doi.org/10.25504/FAIRsharing.zv11j3
  • 14. CC BY-SA 4.0 International Organisations look for ways to promote their work search for related infrastructures and resources Researchers / Research Support Roles look to FAIRsharing for information on relevant resources FAIRsharing relationships showcase projects and reveal hidden connections Relationships with our communities
  • 15. CC BY-SA 4.0 International Organisations look for ways to promote their work search for related infrastructures and resources Researchers / Research Support Roles look to FAIRsharing for information on relevant resources FAIRsharing relationships showcase projects and reveal hidden connections Relationships with our communities
  • 16. CC BY-SA 4.0 International Organisations look for ways to promote their work search for related infrastructures and resources Researchers / Research Support Roles look to FAIRsharing for information on relevant resources FAIRsharing relationships showcase projects and reveal hidden connections Maintainers / Community Curators showcase projects and reveals hidden connections enrich FAIRsharing content to gain expertise and attribution Relationships with our communities
  • 17. CC BY-SA 4.0 International Organisations look for ways to promote their work search for related infrastructures and resources Researchers / Research Support Roles look to FAIRsharing for information on relevant resources FAIRsharing relationships showcase projects and reveal hidden connections Maintainers / Community Curators showcase projects and reveals hidden connections enrich FAIRsharing content to gain expertise and attribution Relationships with our communities Communities Engagement with FAIRsharing aids resource discovery, gap analysis and further targeted outreach and engagement
  • 18. CC BY-SA 4.0 International Organisations look for ways to promote their work search for related infrastructures and resources Researchers / Research Support Roles look to FAIRsharing for information on relevant resources FAIRsharing relationships showcase projects and reveal hidden connections Maintainers / Community Curators showcase projects and reveals hidden connections enrich FAIRsharing content to gain expertise and attribution Relationships with our communities Communities Engagement with FAIRsharing aids resource discovery, gap analysis and further targeted outreach and engagement FAIRsharing for communities We help you customise your view of FAIRsharing to declare and visualise the standards and repositories you use We promote your organisation and your efforts as a maintainer/curator We help you leverage wider knowledge, share information, support open science and connect infrastructures
  • 19. CC BY-SA 4.0 International GBIF FAIRsharing relationships showcase projects and reveal hidden connections Relationships with our communities GBIF Use Case GBIF wants to perform a landscape analysis of infrastructures adjacent to them and to the BiCIKL consortium. GBIF Community Manager Kyle Copas asks FAIRsharing if we can help, and joins us as a Community Curator for Biodiversity
  • 20. CC BY-SA 4.0 International GBIF FAIRsharing relationships showcase projects and reveal hidden connections Relationships with our communities GBIF Use Case GBIF wants to perform a landscape analysis of infrastructures adjacent to them and to the BiCIKL consortium. GBIF Community Manager Kyle Copas asks FAIRsharing if we can help, and joins us as a Community Curator for Biodiversity
  • 21. CC BY-SA 4.0 International GBIF FAIRsharing relationships showcase projects and reveal hidden connections Relationships with our communities GBIF Use Case GBIF wants to perform a landscape analysis of infrastructures adjacent to them and to the BiCIKL consortium. GBIF Community Manager Kyle Copas asks FAIRsharing if we can help, and joins us as a Community Curator for Biodiversity Kyle gains personal attribution and expertise as a result of his efforts
  • 22. CC BY-SA 4.0 International GBIF FAIRsharing relationships showcase projects and reveal hidden connections Relationships with our communities Associated Communities GBIF Use Case GBIF wants to perform a landscape analysis of infrastructures adjacent to them and to the BiCIKL consortium. GBIF Community Manager Kyle Copas asks FAIRsharing if we can help, and joins us as a Community Curator for Biodiversity Kyle gains personal attribution and expertise as a result of his efforts His role as a Community Curator promotes the work of GBIF by enriching FAIRsharing content, revealing connections that they weren't aware of going into the collaboration/project
  • 23. CC BY-SA 4.0 International Tailored views for education and promotion Collections are are branded pages that group selected standards and/or repositories Initiatives and projects have created them for several purposes, e.g. to list resources: URL: https://fairsharing.org/CrosswalkOfMostUsedMetadataSchemesAndGuidelines Maintainers Subjects Mapped to each other URL: https://fairsharing.org/RDACovid19WG Maintainers Subjects Recommended by a community URL: https://fairsharing.org/IVOA Maintainers Subjects Developed by the community URL: https://fairsharing.org/CDISC Maintainers Subjects Developed by a SDO
  • 24. CC BY-SA 4.0 International Linking associated data resources, standards and policies Organization and user attribution
  • 25. CC BY-SA 4.0 International https://fairsharing.org/graph/3776 EU-funded BiCIKL Consortium is curating entries in FAIRsharing to structure landscaping analysis of adjacent infrastructures https://bicikl-project.eu/
  • 26. CC BY-SA 4.0 International https://fairsharing.org/graph/3776 EU-funded BiCIKL Consortium is curating entries in FAIRsharing to structure landscaping analysis of adjacent infrastructures https://bicikl-project.eu/
  • 27. CC BY-SA 4.0 International FAIRsharing Community Curator Programme ● Gain on-the-job curation expertise ● Engagement and networking with a community of like-minded people ● Become an expert on data and metadata standards, repositories and data policies in their area ● Influence new FAIRsharing functionalities ● Attribution via ORCID, specialist user profiles, and others Curate – Influence – Gain Attribution – Engage – Learn fairsharing.org/community_curation
  • 28. CC BY-SA 4.0 International Stakeholder Advisors ● Amye Kenall, Research Square ● Adam Leary, Oxford University Press ● Catriona MacCallum, Hindawi ● Dagmar Meyer, European Research Council, Executive Agency ● Dominic Fripp, JISC ● Emma Ganley, Protocols.io ● Geraldine Clement-Stoneham, Medical Research Council ● Helena Cousijn, DataCite ● Lauren Cadwallader, PLoS ● Imma Subirats, FAO of the United Nations ● Kiera McNiece, Cambridge University Press ● Luiz Olavo Bonino, GO-FAIR ● Lorenzo Feri and Sarah Callaghan, Elsevier ● Michael Ball, Medical Research Council ● Mike Huerta, NIH National Library of Medicine ● Molly Cranston and Guillaume Wright, F1000Research ● Nick Everitt and Matthew Cannon, Taylor and Francis ● Sarah Stewart, Bodleian Libraries, University of Oxford ● Scott Edmunds, GigaScience, Oxford University Press ● Simon Hodson, CODATA ● Theo Bloom, British Medical Journal ● Thomas Lemberger, EMBO Press ● Wei-Mun Chan, eLife ● Sowmya Swaminathan, Springer Nature ● Marta Teperek, TUDelft Current Operational Team ● Allyson Lister, Content and Community Lead ● Milo Thurston, Technical Lead ● Ramon Granell, Data Enrichment & Quality Manager ● Delphine Dauga, Data Curator Manager ● Prakhyat Gailani, Web Developer ● Dominique Batista, Research Software Engineer ● Philippe Rocca-Serra, Co-Founder ● Susanna-Assunta Sansone, PI and Founder ● and many collaborators and contributors! Executive Advisors ● Chris Graf, Springer Nature ● David Carr, Independent expert ● Peter McQuilton, (FAIRsharing Founding Member), GSK ● Robert Hanisch, National Institute of Standards and Technology ● Varsha Khodiyar, Independent Expert Community Curators https://fairsharing.org/community_curation/our_curators Thank you!