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From DNA to Protein
(Replication and Transcription)
UNIVERSITY OF TEHRAN
Ahmad V.Kashani, PhD
Outlines
• DNA structure
• DNA Replication
• Replication models
• Origin of replication
• Replication components
• Leading Strand
• Lagging Strand
• DNA repair and proofreading
• Transcription
• Bacteria vs. Eukarya
• The Genetic Code
DNA Structure
DNA Structure
DNA Structure
DNA Structure
DNA Replication
DNA Replication Models
• Three models:
• Conservative
• Semiconservative
• Dispersive
DNA Replication Models
Origin of
Replication
DNA Replication Components
DNA Replication –
Leading Strand
• Based on conservative model of
replication, two forms of newly
synthesized strands are made
during replication process:
• Leading strand
• Lagging strand
DNA Replication –
Lagging Strand
DNA Replication
Overview
DNA Replication Overview
Protein Arrangement at the replication fork
DNA Replication Overview
DNA Repair & Proofreading
• The damaged DNA is cut by a DNA-cutting
enzyme called nuclease.
• The repairing enzymes are:
• DNA polymerase
• DNA ligase
• Example: DNA repair in skin cells to
correct genetic damages caused by the
ultraviolet ray of sunlight.
Replicating DNA ends
• Eukaryotes have repetitive, noncoding sequences
called telomeres at the ends of their DNA called
telomeres.
• Telomeres do not contain genes; instead, the DNA
typically consists of multiple repetitions of one
short nucleotide sequence.
• In each human telomere, for example, the six-
nucleotide sequence TTAGGG is repeated between
100 and 1,000 times.
Chromosomes: DNA and Proteins Packed together
Transcription
Transcription in Bacteria vs Eukarya
The Genetic Code
• The triple code is the genetic
instructions for a polypeptide chain
are written in the DNA as a series of
non-overlapping, three-nucleotide
words.
• The template strand provides the
pattern, or template, for the sequence
of nucleotides in an RNA transcript.
• The non-template DNA strand is often
called the coding strand.
The Genetic Code
• The three nucleotide bases of an
mRNA codon are read in the 5’ to 3’
direction along the mRNA.
• The codon AUG not only stands for
the amino acid methionine (Met, or
M) but also functions as a “start”
signal for ribosomes to begin
translating the mRNA at that point
• The codons UAA, UAG, and UGA out
of the 64 codons function as “stop”
signals, marking where ribosomes end
translation.
Transcription stages
Bacteria
Transcription stages in Eukarya
Transcription stages in Eukarya –
Elongation & Termination
• Termination
• In eukaryotes, RNA polymerase II transcribes
a sequence on the DNA called the
polyadenylation signal sequence, which
specifies a polyadenylation signal (AAUAAA)
in the pre-mRNA.
• Then, at a point about 10–35 nucleotides
downstream from the AAUAAA, these
proteins cut the RNA transcript free from the
polymerase, releasing the pre-mRNA.
RNA Processing – Phase I
RNA Processing – Phase II
RNA Processing – Phase II
Questions…?
THANK YOU!

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15 - From DNA to Protein - Part I