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Protection and Deprotection 
of Carboxylic Acid 
Guided by:- 
Presented by:- 
Dr. Alex Joseph 
Shivam Sharma 
Associate Professor 
140602005 
Dept. Of Pharmaceutical Science , 
Dept. Of Pharmaceutical Science , 
Mcops, Manipal Mcops, Manipal 
1
Contents 
1. Introduction 
2. Examples of protecting and deprotecting groups 
3. General preparations of esters 
4. General Cleavage of esters 
5. Individual explanation 
6. Reference 
2
Why a Carboxylic Acid group be protected? 
 To mask the acidic proton so that it does not interfere with base - 
catalyzed reactions 
 To prevent nucleophilic addition reactions 
 To improve the handling of the molecule 
Example- To make the compound less water soluble , 
To improve its NMR characteristics 
To make it more volatile so that it can be analyzed by gas 
chromatography. 
3
2,2,2- Trifluro ethyl ester 
Protecting and deprotecting group 
4
General preparation of ester 
1- Carboxylate 
activation 
2- Nucleophilic 
displacement of 
carboxylate 
5
Example:- 
1- 
2- 
O 
R OH 
O 
TMSCl 
+ R'OH R OR' 
22-270 C , 0.1- 48 Hours 
67-98 % 
R C H C O 2 H 
N H P G 
+ R ' X R C H C O 2 R ' 
N H P G 
N a H C O 3 , D M F 
2 5 0 C , 2 4 H 
9 0 - 9 5 % 
3- 
6
General cleavage of ester 
1- 
O 
R OH 
O 
R OR' 
TMSCl, NaI, CH3CN 
Reflux, 5-35 H , 70-90% 
2- 
O 
R OH 
O 
R OR' 
MgI2, Toluene 
1-3 Days , 41-96% 
+ R' I 
3- 
O 
R OH 
O 
R OR' 
Aq. NaOH, DMF ,HCl 
15- 16min , 36-98% 
7
Methyl ester 
Formation:- O 
P r o t e c t i o n 
D e p r o t e c t i o n 
O 
R O H 
R O C H 3 
 CH2 N2, Et2 O, RT, 90min, 92% 
 CH2 N2, MeOH, RT, 60min. 84% 
 MeOH, H2 SO4, 00 , 1 H, 50 , 18H, 98% 
8
Cleavage:- 
 LiOH, CH3 OH, H2O, 50, 15H 
 AlBr3, Tetrahydrothiophene, RT, 62H, 98% 
 LiI, Pyr, Reflux, 91% 
9
t- Butyl ester 
Formation:- 
Isobutylene, H2SO4, Et2O, 250 , 2- 24 H , 50-60% 
T- BuOH , DMAP, Benzene, 200 C 
Bu3PI2 , Et2O, HMPA, t- BuOH, 73% 
Isobutylene, CH2Cl2, H3 PO4(P2O5), 780 C, 2 H 
10
Cleavage:- 
 HCO2H, 200 , 3 H 
CF3CO2H, CH2Cl2 , 250 , 1 H 
Bromocatechol borane 
TsOH, Benzene , Reflux 30 min, 76% 
11
Allyl ester 
Formation:- 
O 
R O H 
Allyl bromide, Cs2Co3, DMF, 84% 
R O 
Vinyl diazo methane, CH2 Cl2, 80-92% 
Allyl alcohol , TsOH, Benzene , -H2O 
Allyl bromide, NaHCO3, CH2Cl2 , 83% 
O 
12
Cleavage:- 
 Papain, DTT, DMF 
 Pd(Ph3 P)4 , BnONH2, CH2Cl2 , 80% 
 Me2CuLi , Et2O, 1 h , 75- 85% 
13
1,1-Dimethyl Allyl ester 
O 
R O H 
 Et2NH, DMF, 91% 
O 
 CuI , KI, Cs2CO3 , DMF , 250 C 
Formation:- 
Cleavage:- 
 BCl3, CH2Cl2 
 Catalytic palladium 
R O 
C H 3 
H 3 C 
1 - C H 3 
C H 3 
C l 
C u I , C a 2 C O 3 
2 - H 2 , L i n d l a r C a t . 
14
2,2,2-Trichloro ethyl ester 
Formation:- 
O 
R O H 
CCl3, CH2OH, DCC , Pyr 
CCl3, CH2OH, TsOH, Toluene , Reflux 
CCl3, CH2OCOCl, THF, Pyr, 60% 
O 
R O C H 2 
C 
C l 3 
C l 3 
C l 3 
15
Benzyl ester 
Formation:- 
 For Amino acids- DCC , DMAP, BnOH, 92% 
 BnBR, DBU , CH3CN, 75% 
 BnOCOCl, Et3N, DMAP, CH2Cl2, 30 min, 97% 
16
Cleavage:- 
 BCl3, CH2Cl2, -10 , RT, 3 H , 90% 
 AlCl3 , Anisole, CH2Cl2 , CH3NO2, 00 – 250 C, 5 H, 80 -95% 
 Acidic alumina , microwave , 7 min, 90 % 
17
Silyl ester 
Trimethyl silyl ester 
Formation:- 
Cleavage:- 
O 
R O H 
O 
R O 
S i ( C H 3 ) 3 
 Me3SiCl / Pyr , CH2Cl2 , 300C , 2H 
 MeC(OSiMe3) = NSiMe3, Dioxane , α- picoline, 
6H , 80% 
 Trimethyl silyl esters 
18
References 
 Protective groups in organic synthesis, third edition, theodora.W.Greene, 
Peter G.M. Wuts 
www.synarchive.com 
www.organic-reaction.com/organic-synthesis/protecting-groups/ 
carboxylic-acid-protecting-groups/ 
19

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Protection and deprotection of carboxylic acid

  • 1. Protection and Deprotection of Carboxylic Acid Guided by:- Presented by:- Dr. Alex Joseph Shivam Sharma Associate Professor 140602005 Dept. Of Pharmaceutical Science , Dept. Of Pharmaceutical Science , Mcops, Manipal Mcops, Manipal 1
  • 2. Contents 1. Introduction 2. Examples of protecting and deprotecting groups 3. General preparations of esters 4. General Cleavage of esters 5. Individual explanation 6. Reference 2
  • 3. Why a Carboxylic Acid group be protected?  To mask the acidic proton so that it does not interfere with base - catalyzed reactions  To prevent nucleophilic addition reactions  To improve the handling of the molecule Example- To make the compound less water soluble , To improve its NMR characteristics To make it more volatile so that it can be analyzed by gas chromatography. 3
  • 4. 2,2,2- Trifluro ethyl ester Protecting and deprotecting group 4
  • 5. General preparation of ester 1- Carboxylate activation 2- Nucleophilic displacement of carboxylate 5
  • 6. Example:- 1- 2- O R OH O TMSCl + R'OH R OR' 22-270 C , 0.1- 48 Hours 67-98 % R C H C O 2 H N H P G + R ' X R C H C O 2 R ' N H P G N a H C O 3 , D M F 2 5 0 C , 2 4 H 9 0 - 9 5 % 3- 6
  • 7. General cleavage of ester 1- O R OH O R OR' TMSCl, NaI, CH3CN Reflux, 5-35 H , 70-90% 2- O R OH O R OR' MgI2, Toluene 1-3 Days , 41-96% + R' I 3- O R OH O R OR' Aq. NaOH, DMF ,HCl 15- 16min , 36-98% 7
  • 8. Methyl ester Formation:- O P r o t e c t i o n D e p r o t e c t i o n O R O H R O C H 3  CH2 N2, Et2 O, RT, 90min, 92%  CH2 N2, MeOH, RT, 60min. 84%  MeOH, H2 SO4, 00 , 1 H, 50 , 18H, 98% 8
  • 9. Cleavage:-  LiOH, CH3 OH, H2O, 50, 15H  AlBr3, Tetrahydrothiophene, RT, 62H, 98%  LiI, Pyr, Reflux, 91% 9
  • 10. t- Butyl ester Formation:- Isobutylene, H2SO4, Et2O, 250 , 2- 24 H , 50-60% T- BuOH , DMAP, Benzene, 200 C Bu3PI2 , Et2O, HMPA, t- BuOH, 73% Isobutylene, CH2Cl2, H3 PO4(P2O5), 780 C, 2 H 10
  • 11. Cleavage:-  HCO2H, 200 , 3 H CF3CO2H, CH2Cl2 , 250 , 1 H Bromocatechol borane TsOH, Benzene , Reflux 30 min, 76% 11
  • 12. Allyl ester Formation:- O R O H Allyl bromide, Cs2Co3, DMF, 84% R O Vinyl diazo methane, CH2 Cl2, 80-92% Allyl alcohol , TsOH, Benzene , -H2O Allyl bromide, NaHCO3, CH2Cl2 , 83% O 12
  • 13. Cleavage:-  Papain, DTT, DMF  Pd(Ph3 P)4 , BnONH2, CH2Cl2 , 80%  Me2CuLi , Et2O, 1 h , 75- 85% 13
  • 14. 1,1-Dimethyl Allyl ester O R O H  Et2NH, DMF, 91% O  CuI , KI, Cs2CO3 , DMF , 250 C Formation:- Cleavage:-  BCl3, CH2Cl2  Catalytic palladium R O C H 3 H 3 C 1 - C H 3 C H 3 C l C u I , C a 2 C O 3 2 - H 2 , L i n d l a r C a t . 14
  • 15. 2,2,2-Trichloro ethyl ester Formation:- O R O H CCl3, CH2OH, DCC , Pyr CCl3, CH2OH, TsOH, Toluene , Reflux CCl3, CH2OCOCl, THF, Pyr, 60% O R O C H 2 C C l 3 C l 3 C l 3 15
  • 16. Benzyl ester Formation:-  For Amino acids- DCC , DMAP, BnOH, 92%  BnBR, DBU , CH3CN, 75%  BnOCOCl, Et3N, DMAP, CH2Cl2, 30 min, 97% 16
  • 17. Cleavage:-  BCl3, CH2Cl2, -10 , RT, 3 H , 90%  AlCl3 , Anisole, CH2Cl2 , CH3NO2, 00 – 250 C, 5 H, 80 -95%  Acidic alumina , microwave , 7 min, 90 % 17
  • 18. Silyl ester Trimethyl silyl ester Formation:- Cleavage:- O R O H O R O S i ( C H 3 ) 3  Me3SiCl / Pyr , CH2Cl2 , 300C , 2H  MeC(OSiMe3) = NSiMe3, Dioxane , α- picoline, 6H , 80%  Trimethyl silyl esters 18
  • 19. References  Protective groups in organic synthesis, third edition, theodora.W.Greene, Peter G.M. Wuts www.synarchive.com www.organic-reaction.com/organic-synthesis/protecting-groups/ carboxylic-acid-protecting-groups/ 19