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Basic Principles and Controversies in PET Amyloid Imaging Robert A. Koeppe, Ph.D. University of Michigan January 13, 2012
TOPICS ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Reference Tissue Considerations ,[object Object],[object Object],[object Object]
Reference Tissue Considerations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Target Region Considerations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Target Region Considerations ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Thresholds for Amyloid Positivity ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Analysis of ADNI AV45 scans ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
AV45 scans:  MCI subjects  (n = 305) Cerebellar Gray ;  Pons ;  White Matter ;  Cortex (5 region avg.)
AV45 scans:  MCI subjects  (n = 305)   (sorted) Cerebellar Gray ;  Pons ;  White Matter ;  Cortex (5 region avg.)
AV45 scans:  NC subjects  (n = 138)   (sorted) Cerebellar Gray ;  Pons ;  White Matter ;  Cortex (5 region avg.)
AV45 scans:  MCI subjects  (n = 305) Cerebellar Gray ;  Pons ;  White Matter ;  Cortex (5 region avg.)
Amyloid positivity threshold  –  Cerebellar Gray   ref. region
Amyloid positivity threshold  –  Pons  reference region
Amyloid positivity threshold  –  White Matter  ref. region
Amyloid positivity threshold  –  Combined   reference region
Mean   (COV)  and  Positivity Threshold* * Positivity threshold  calculated from the  100  controls (of 138) with lowest mean cortical amyloid values.  Threshold  =  region mean  +  3 SD
Tissue Concentration Ratio Differences between   Amyloid  Negative NC  and  MCI  Subjects
Amyloid Positivity by  Target  Region  Group # of Positive  for 4 ref reg approaches Lateral Frontal Medial Frontal Posterior Cingulate Superior Parietal Lateral Temporal Occipital NC 138 0 (none) 69.6% 68.8% 65.9% 66.7% 68.1% 73.9% 1 2.9% 2.2% 5.1% 3.6% 2.9% 6.5% 2 2.2% 2.2% 5.1% 3.6% 4.3% 3.6% 3 11.6% 9.4% 7.2% 7.2% 6.5% 4.3% 4 (all) 13.8% 17.4% 16.7% 18.8% 18.1% 11.6% MCI 305 0 (none) 48.9% 48.9% 48.5% 49.5% 51.1% 56.1% 1 4.9% 5.9% 7.5% 4.3% 3.9% 10.2% 2 2.3% 2.0% 2.0% 1.0% 2.3% 3.9% 3 13.4% 6.6% 8.9% 8.5% 9.8% 9.2% 4 (all) 29.5% 36.6% 33.1% 36.7% 32.8% 20.7%
Amyloid Positivity by  Reference  Region Group NC  (n=138) MCI  (n=305) # Target Regions Positive Cereb Gray Pons White Matter Combination Cereb Gray Pons White Matter Combination 0 (none) 68.1% 68.8% 67.4% 65.9% 57.0% 54.4% 42.3% 51.8% 1 2.2% 3.6% 2.2% 1.4% 2.3% 1.6% 5.6% 1.3% 2 3.6% 4.3% 3.6% 4.3% 3.0% 2.6% 2.0% 1.6% 3 2.9% 2.2% 0.7% 2.2% 1.6% 1.0% 1.3% 1.6% 4 7.2% 2.9% 2.9% 4.3% 5.6% 3.6% 3.3% 2.3% 5 3.6% 3.6% 5.8% 5.8% 11.5% 10.2% 6.6% 10.5% 6 (all) 12.3% 14.5% 17.4% 15.9% 19.0% 26.6% 39.0% 30.8%
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Scanner/Software Effects:  ‘Negative’ NC and MCI Subjects
Scanner/Software Effects:  ‘Negative’ NC and MCI Subjects
[ 18 F]AV45  vs. [ 11 C]PiB ,[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[ 18 F]AV45  vs. [ 11 C]PiB
AV – negative Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
PiB – negative Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
AV – positive Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
PiB – positive Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
Amyloid Surface Map Creation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
MR segmentation (FreeSurfer ) Co-registered  AV45 PET
MR segmentation (FreeSurfer ) MR segmentation smoothed to PET resolution
Smoothed/segmented MR oriented to standardized PET ,[object Object],[object Object],[object Object],Pre-defined surface regions:  Peak surface pixels located on smoothed MR then applied to amyloid images Pre-defined regions in surface map orientation
Amyloid Negative Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization AV PiB AV PiB AV PiB AV PiB
Amyloid Positive Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization AV PiB AV PiB AV PiB AV PiB
AV45 Amyloid Neg/Pos ? PiB
Amyloid  Neg/Pos? AV45 PiB
Amyloid Neg/Pos ? AV45
Group average images  AV – negative (n=12)  row 1   AV – positive (n=17)  row 2 PiB – negative  (n=12)  row 3 PiB – positive  (n=17)  row 4
Group average surface maps  AV – negative  row 1   AV – positive  row 2 PiB – negative  row 3   PiB – positive  row 4
The relative values of cerebellar gray, pons and white matter are similar for PiB and AV45 (slopes ~1.0 across these structures). Slopes for cortical regions are  ~0.60-0.65  (for all reference tissue normalizations)
Cortical VOI magnitudes for  AV45  and  PiB  (+group:  mean ± SD )
Fractional  Signal  Above Cerebellar Gray Reference Region Tracer Posterior Cingulate Superior Parietal Lateral Frontal Medial Frontal Lateral Temporal Occipital Cerebellar Gray AV45 PiB 0.45±0.33 0.72±0.65 0.38±0.43 0.74±0.65 0.36±0.37 0.61±0.53 0.34±0.33 0.58±0.48 0.31±0.33 0.53±0.49 0.30±0.29 0.44±0.35 Ratio 62.0% 51.9% 59.1% 58.2% 58.1% 67.9% Pons AV45 PiB 0.44±0.37 0.74±0.54 0.38±0.46 0.77±0.78 0.36±0.41 0.64±0.66 0.33±0.37 0.61±0.60 0.30±0.38 0.55±0.61 0.29±0.33 0.45±0.43 Ratio  59.5% 48.9% 55.8% 54.9% 54.9% 65.5% White Matter AV45 PiB 0.42±0.26 0.71±0.44 0.36±0.38 0.74±0.70 0.34±0.33 0.61±0.58 0.32±0.29 0.59±0.53 0.29±0.29 0.53±0.54 0.29±0.30 0.44±0.39 Ratio 59.8% 48.8% 55.2% 54.2% 54.7% 65.4% Combined AV45 PiB 0.43±0.28 0.72±0.44 0.37±0.39 0.75±0.68 0.35±0.34 0.62±0.56 0.33±0.29 0.59±0.51 0.30±0.31 0.53±0.52 0.29±0.27 0.44±0.36 Ratio  60.0% 49.7% 56.7% 55.7% 55.9% 66.3%
Mean Z-scores for  ‘High’ Individuals relative to ‘Low’ Group Z individual   =  [ SUVr ind  –  mean(SUVr lo ) ]  /  SD(SUVr lo )  Reference Region Target VOI Method Lateral Temporal  AV / PiB Superior Parietal  AV / PiB Medial Frontal  AV / PiB Lateral Frontal  AV / PiB Posterior Cingulate  AV / PiB Occipital  AV / PiB Cereb Gray Atlas VOIs 3.8 / 8.5 3.7 / 7.2 3.6 / 8.8 3.2 / 7.5 2.1 / 4.8 2.7 / 3.9 FDG mask 8.1 / 12.2 7.5 / 9.6 5.6 / 9.3 5.4 / 8.6 3.6 / 8.1 4.9 / 7.1 MR mask 7.6 / 12.3 9.8 / 6.7 6.4 / 7.6 7.1 / 9.3 6.6 / 5.6 4.4 / 4.4 Pons Atlas VOIs 3.1 / 5.8 3.3 / 5.6 3.4 / 5.4 2.7 / 4.9 1.9 / 5.1 2.9 / 3.7 FDG mask 4.9 / 8.5 4.9 / 6.9 5.0 / 7.2 4.1 / 6.5 2.9 / 5.1 2.8 / 4.7 MR mask 6.1 / 12.4 5.1 / 8.4 5.5 / 8.2 4.9 / 8.6 4.0 / 7.2 3.5 / 5.3 White Matter Atlas VOIs 8.9 / 10.0 9.7 / 14.9 7.4 / 8.7 5.1 / 6.9 2.9 / 9.2 4.7 / 8.1 FDG mask 9.2 / 11.9 8.8 / 11.7 8.5 / 8.3 7.1 / 7.4 3.8 / 5.6 4.8 / 7.9 MR mask 7.3 / 9.9 7.7 / 14.0 8.6 / 9.5 6.8 / 9.0 6.0 / 11.1 4.1 / 7.4 Combined Atlas VOIs 6.7 / 10.9 6.3 / 9.8 6.0 / 9.2 4.9 / 7.8 3.1 / 8.6 4.1 / 6.6 FDG mask 10.6/13.4 9.6 / 10.5 7.9 / 9.1 7.1 / 8.4 4.1 / 7.4 5.2 / 8.7 MR mask 11.0/15.6 11.0/11.9 11.9/11.7 8.2 / 11.4 7.3 / 10.6 4.6 / 7.4
Summary Z-scores Measures Target Region avg z-score # best  (of 12) Reference Reg avg z-score # best (of 18) VOI Method avg z-score # best (of 24) Radiotracer avg z-score # best  (of 72) Lateral Temporal  AV / PiB Superior Parietal  AV / PiB Medial Frontal  AV / PiB Lateral Frontal  AV / PiB Posterior Cingulate  AV / PiB Occipital  AV / PiB 7.28 / 10.95 7.28 / 9.77 6.65 / 8.58 5.55 / 8.03 4.03 / 7.37 4.06 / 6.27 6  /  9 2  /  2 3  /  1 1  /  0 0  /  0 0  /  0 Combined  AV / PiB White Matter  AV / PiB Cerebellar Gray  AV / PiB Pons  AV / PiB 7.20 / 9.94 6.74 / 9.53 5.34 / 7.86 3.94 / 6.64 12  /  9 6  /  6 0  /  3 1  /  0 MR mask AV / PiB FDG mask AV / PiB Atlas VOIs AV / PiB 6.90 / 9.40 6.10 / 8.50 4.43 / 7.58 17  /  15 6  /  7 1  /  2 All Measures AV / PiB 5.81 / 8.49 5  /  67
Partial Volume Correction ,[object Object],[object Object],[object Object]
Partial Volume Correction ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
MR segmentation (FreeSurfer ) Co-registered  AV45 PET
Grey matter mask from segmentation White matter mask from segmentation
White matter mask smoothed to PET resolution Grey matter mask smoothed to PET resolution
Determination of White Matter Value ,[object Object]
MR-based Tissue Fractions for Cortical VOIs ** Gray matter VOI tissue fractions average  8%  lower in the  “high”  amyloid group than the “low” amyloid group  Partial Volume Fraction Lateral Frontal Medial Frontal Posterior Cingulate Superior Parietal Lateral Temporal Occipital Gray (mean ± sd) Low (n=12) 0.56±0.04 0.55±0.04 0.57±0.04 0.55±0.04 0.60±0.03 0.51±0.04 **   High (n=17) 0.52±0.03 0.51±0.04 0.50±0.05 0.50±0.04 0.56±0.04 0.48±0.04 White (mean ± sd) Low (n=12) 0.23±0.05 0.24±0.05 0.21±0.04 0.25±0.05 0.21±0.04 0.29±0.04 High (n=17) 0.25±0.03 0.27±0.05 0.26±0.06 0.29±0.05 0.25±0.04 0.31±0.06 CSF (mean ± sd) Low (n=12) 0.21±0.02 0.21±0.02 0.22±0.02 0.20±0.03 0.19±0.02 0.20±0.02 High (n=17) 0.23±0.04 0.22±0.06 0.24±0.03 0.21±0.05 0.19±0.04 0.21±0.03
Partial Volume Correction Amyloid Measures   ( Temporal Cortex )
PVC effect on individual Z-score measures   ( Cortex:  ‘Avg. 5’ )
Take-home Points and Parting Thoughts ,[object Object],[object Object],[object Object],[object Object]
Take-home Points and Parting Thoughts ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

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Koeppe ppt

  • 1. Basic Principles and Controversies in PET Amyloid Imaging Robert A. Koeppe, Ph.D. University of Michigan January 13, 2012
  • 2.
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  • 9. AV45 scans: MCI subjects (n = 305) Cerebellar Gray ; Pons ; White Matter ; Cortex (5 region avg.)
  • 10. AV45 scans: MCI subjects (n = 305) (sorted) Cerebellar Gray ; Pons ; White Matter ; Cortex (5 region avg.)
  • 11. AV45 scans: NC subjects (n = 138) (sorted) Cerebellar Gray ; Pons ; White Matter ; Cortex (5 region avg.)
  • 12. AV45 scans: MCI subjects (n = 305) Cerebellar Gray ; Pons ; White Matter ; Cortex (5 region avg.)
  • 13. Amyloid positivity threshold – Cerebellar Gray ref. region
  • 14. Amyloid positivity threshold – Pons reference region
  • 15. Amyloid positivity threshold – White Matter ref. region
  • 16. Amyloid positivity threshold – Combined reference region
  • 17. Mean (COV) and Positivity Threshold* * Positivity threshold calculated from the 100 controls (of 138) with lowest mean cortical amyloid values. Threshold = region mean + 3 SD
  • 18. Tissue Concentration Ratio Differences between Amyloid Negative NC and MCI Subjects
  • 19. Amyloid Positivity by Target Region Group # of Positive for 4 ref reg approaches Lateral Frontal Medial Frontal Posterior Cingulate Superior Parietal Lateral Temporal Occipital NC 138 0 (none) 69.6% 68.8% 65.9% 66.7% 68.1% 73.9% 1 2.9% 2.2% 5.1% 3.6% 2.9% 6.5% 2 2.2% 2.2% 5.1% 3.6% 4.3% 3.6% 3 11.6% 9.4% 7.2% 7.2% 6.5% 4.3% 4 (all) 13.8% 17.4% 16.7% 18.8% 18.1% 11.6% MCI 305 0 (none) 48.9% 48.9% 48.5% 49.5% 51.1% 56.1% 1 4.9% 5.9% 7.5% 4.3% 3.9% 10.2% 2 2.3% 2.0% 2.0% 1.0% 2.3% 3.9% 3 13.4% 6.6% 8.9% 8.5% 9.8% 9.2% 4 (all) 29.5% 36.6% 33.1% 36.7% 32.8% 20.7%
  • 20. Amyloid Positivity by Reference Region Group NC (n=138) MCI (n=305) # Target Regions Positive Cereb Gray Pons White Matter Combination Cereb Gray Pons White Matter Combination 0 (none) 68.1% 68.8% 67.4% 65.9% 57.0% 54.4% 42.3% 51.8% 1 2.2% 3.6% 2.2% 1.4% 2.3% 1.6% 5.6% 1.3% 2 3.6% 4.3% 3.6% 4.3% 3.0% 2.6% 2.0% 1.6% 3 2.9% 2.2% 0.7% 2.2% 1.6% 1.0% 1.3% 1.6% 4 7.2% 2.9% 2.9% 4.3% 5.6% 3.6% 3.3% 2.3% 5 3.6% 3.6% 5.8% 5.8% 11.5% 10.2% 6.6% 10.5% 6 (all) 12.3% 14.5% 17.4% 15.9% 19.0% 26.6% 39.0% 30.8%
  • 21.
  • 22. Scanner/Software Effects: ‘Negative’ NC and MCI Subjects
  • 23.
  • 24.
  • 25. AV – negative Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
  • 26. PiB – negative Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
  • 27. AV – positive Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
  • 28. PiB – positive Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization
  • 29.
  • 30. MR segmentation (FreeSurfer ) Co-registered AV45 PET
  • 31. MR segmentation (FreeSurfer ) MR segmentation smoothed to PET resolution
  • 32.
  • 33. Amyloid Negative Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization AV PiB AV PiB AV PiB AV PiB
  • 34. Amyloid Positive Cerebellar Gray Normalization White Matter Normalization Pons Normalization Combined Normalization AV PiB AV PiB AV PiB AV PiB
  • 36. Amyloid Neg/Pos? AV45 PiB
  • 38. Group average images AV – negative (n=12) row 1 AV – positive (n=17) row 2 PiB – negative (n=12) row 3 PiB – positive (n=17) row 4
  • 39. Group average surface maps AV – negative row 1 AV – positive row 2 PiB – negative row 3 PiB – positive row 4
  • 40. The relative values of cerebellar gray, pons and white matter are similar for PiB and AV45 (slopes ~1.0 across these structures). Slopes for cortical regions are ~0.60-0.65 (for all reference tissue normalizations)
  • 41. Cortical VOI magnitudes for AV45 and PiB (+group: mean ± SD )
  • 42. Fractional Signal Above Cerebellar Gray Reference Region Tracer Posterior Cingulate Superior Parietal Lateral Frontal Medial Frontal Lateral Temporal Occipital Cerebellar Gray AV45 PiB 0.45±0.33 0.72±0.65 0.38±0.43 0.74±0.65 0.36±0.37 0.61±0.53 0.34±0.33 0.58±0.48 0.31±0.33 0.53±0.49 0.30±0.29 0.44±0.35 Ratio 62.0% 51.9% 59.1% 58.2% 58.1% 67.9% Pons AV45 PiB 0.44±0.37 0.74±0.54 0.38±0.46 0.77±0.78 0.36±0.41 0.64±0.66 0.33±0.37 0.61±0.60 0.30±0.38 0.55±0.61 0.29±0.33 0.45±0.43 Ratio 59.5% 48.9% 55.8% 54.9% 54.9% 65.5% White Matter AV45 PiB 0.42±0.26 0.71±0.44 0.36±0.38 0.74±0.70 0.34±0.33 0.61±0.58 0.32±0.29 0.59±0.53 0.29±0.29 0.53±0.54 0.29±0.30 0.44±0.39 Ratio 59.8% 48.8% 55.2% 54.2% 54.7% 65.4% Combined AV45 PiB 0.43±0.28 0.72±0.44 0.37±0.39 0.75±0.68 0.35±0.34 0.62±0.56 0.33±0.29 0.59±0.51 0.30±0.31 0.53±0.52 0.29±0.27 0.44±0.36 Ratio 60.0% 49.7% 56.7% 55.7% 55.9% 66.3%
  • 43. Mean Z-scores for ‘High’ Individuals relative to ‘Low’ Group Z individual = [ SUVr ind – mean(SUVr lo ) ] / SD(SUVr lo ) Reference Region Target VOI Method Lateral Temporal AV / PiB Superior Parietal AV / PiB Medial Frontal AV / PiB Lateral Frontal AV / PiB Posterior Cingulate AV / PiB Occipital AV / PiB Cereb Gray Atlas VOIs 3.8 / 8.5 3.7 / 7.2 3.6 / 8.8 3.2 / 7.5 2.1 / 4.8 2.7 / 3.9 FDG mask 8.1 / 12.2 7.5 / 9.6 5.6 / 9.3 5.4 / 8.6 3.6 / 8.1 4.9 / 7.1 MR mask 7.6 / 12.3 9.8 / 6.7 6.4 / 7.6 7.1 / 9.3 6.6 / 5.6 4.4 / 4.4 Pons Atlas VOIs 3.1 / 5.8 3.3 / 5.6 3.4 / 5.4 2.7 / 4.9 1.9 / 5.1 2.9 / 3.7 FDG mask 4.9 / 8.5 4.9 / 6.9 5.0 / 7.2 4.1 / 6.5 2.9 / 5.1 2.8 / 4.7 MR mask 6.1 / 12.4 5.1 / 8.4 5.5 / 8.2 4.9 / 8.6 4.0 / 7.2 3.5 / 5.3 White Matter Atlas VOIs 8.9 / 10.0 9.7 / 14.9 7.4 / 8.7 5.1 / 6.9 2.9 / 9.2 4.7 / 8.1 FDG mask 9.2 / 11.9 8.8 / 11.7 8.5 / 8.3 7.1 / 7.4 3.8 / 5.6 4.8 / 7.9 MR mask 7.3 / 9.9 7.7 / 14.0 8.6 / 9.5 6.8 / 9.0 6.0 / 11.1 4.1 / 7.4 Combined Atlas VOIs 6.7 / 10.9 6.3 / 9.8 6.0 / 9.2 4.9 / 7.8 3.1 / 8.6 4.1 / 6.6 FDG mask 10.6/13.4 9.6 / 10.5 7.9 / 9.1 7.1 / 8.4 4.1 / 7.4 5.2 / 8.7 MR mask 11.0/15.6 11.0/11.9 11.9/11.7 8.2 / 11.4 7.3 / 10.6 4.6 / 7.4
  • 44. Summary Z-scores Measures Target Region avg z-score # best (of 12) Reference Reg avg z-score # best (of 18) VOI Method avg z-score # best (of 24) Radiotracer avg z-score # best (of 72) Lateral Temporal AV / PiB Superior Parietal AV / PiB Medial Frontal AV / PiB Lateral Frontal AV / PiB Posterior Cingulate AV / PiB Occipital AV / PiB 7.28 / 10.95 7.28 / 9.77 6.65 / 8.58 5.55 / 8.03 4.03 / 7.37 4.06 / 6.27 6 / 9 2 / 2 3 / 1 1 / 0 0 / 0 0 / 0 Combined AV / PiB White Matter AV / PiB Cerebellar Gray AV / PiB Pons AV / PiB 7.20 / 9.94 6.74 / 9.53 5.34 / 7.86 3.94 / 6.64 12 / 9 6 / 6 0 / 3 1 / 0 MR mask AV / PiB FDG mask AV / PiB Atlas VOIs AV / PiB 6.90 / 9.40 6.10 / 8.50 4.43 / 7.58 17 / 15 6 / 7 1 / 2 All Measures AV / PiB 5.81 / 8.49 5 / 67
  • 45.
  • 46.
  • 47. MR segmentation (FreeSurfer ) Co-registered AV45 PET
  • 48. Grey matter mask from segmentation White matter mask from segmentation
  • 49. White matter mask smoothed to PET resolution Grey matter mask smoothed to PET resolution
  • 50.
  • 51. MR-based Tissue Fractions for Cortical VOIs ** Gray matter VOI tissue fractions average 8% lower in the “high” amyloid group than the “low” amyloid group Partial Volume Fraction Lateral Frontal Medial Frontal Posterior Cingulate Superior Parietal Lateral Temporal Occipital Gray (mean ± sd) Low (n=12) 0.56±0.04 0.55±0.04 0.57±0.04 0.55±0.04 0.60±0.03 0.51±0.04 ** High (n=17) 0.52±0.03 0.51±0.04 0.50±0.05 0.50±0.04 0.56±0.04 0.48±0.04 White (mean ± sd) Low (n=12) 0.23±0.05 0.24±0.05 0.21±0.04 0.25±0.05 0.21±0.04 0.29±0.04 High (n=17) 0.25±0.03 0.27±0.05 0.26±0.06 0.29±0.05 0.25±0.04 0.31±0.06 CSF (mean ± sd) Low (n=12) 0.21±0.02 0.21±0.02 0.22±0.02 0.20±0.03 0.19±0.02 0.20±0.02 High (n=17) 0.23±0.04 0.22±0.06 0.24±0.03 0.21±0.05 0.19±0.04 0.21±0.03
  • 52. Partial Volume Correction Amyloid Measures ( Temporal Cortex )
  • 53. PVC effect on individual Z-score measures ( Cortex: ‘Avg. 5’ )
  • 54.
  • 55.

Editor's Notes

  1. Both cerebral and cerebellar white matter
  2. Won’t spend much time on the first question
  3. Subjects plots in order of Subject ID xxx_S_yyyy. Original ADNI Reference of Atlas cereb gray voi
  4. Note the two sections of correlated cortex values with Pons and White Matter. Caused by variability in cerebellar gray values. Likely negative if cortex is markedly lower than pons or white matter. Likely positive if cortex similar to pons, and nearing white matter.
  5. Same for controls, except fewer positive scans. Also white matter values a little higher, hence cortex normalized to white matter will be lower.
  6. Note tighter distribution of alternative ref regions using combined region, Also best distinction of cortex
  7. Threshold defined as mean + 3 std devs of the lowest 100 controls
  8. Point out: 1) tresholds highly dependent on reference , slight dependence on target. 2) Combined more suitable because the amyloid “negative” cortical values have lower variance !
  9. Note effect of lower white matter relative to cerebellum/pons in MCI, causes cortical values in amyloid negative to be slightly higher.
  10. Regions show similar sensitivity except for occipital (least positive)
  11. Note white matter has most subjects positive. Remember that white matter is lower in MCI relative to cerebellum and pons.
  12. Mostly scatter correction effects: which effects image contrast: HRRT old highest, then BioGraph, then GE, then Phlips, then HR+ then HRRT new Effects reduced by white matter or combined normalization
  13. Standardized image scale. If all references regions worked perfectly, then images using different reference regions would be scaled and hence look exactly the same.
  14. Just the n=17
  15. Note negative subjects haven’t changed much, as PVC effects CBL and CTX about the same. In amyloid positive subjects, get considerable enhancement