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AP Biology 2007-2008
Cellular Respiration
Stage 1:
Glycolysis
AP Biology 2007-2008
What’s the
point?
The point
is to make
ATP!
ATP
AP Biology
Glycolysis
glucose → → → → → pyruvate
2x6C 3C
In the
cytosol?
Why does
that make
evolutionary
sense?
That’s not enough
ATP for me!
 Breaking down glucose
 “glyco – lysis” (splitting sugar)
 ancient pathway which harvests energy
 where energy transfer first evolved
 transfer energy from organic molecules to ATP
 still is starting point for ALL cellular respiration
 but it’s inefficient
 generate only 2 ATP for every 1 glucose
 occurs in cytosol
AP Biology
Evolutionary perspective
 Prokaryotes
 first cells had no organelles
 Anaerobic atmosphere
 life on Earth first evolved without free oxygen (O2)
in atmosphere
 energy had to be captured from organic molecules
in absence of O2
 Prokaryotes that evolved glycolysis are ancestors
of all modern life
 ALL cells still utilize glycolysis
You mean
we’re related?
Do I have to invite
them over for
the holidays?
Enzymes
of glycolysis are
“well-conserved”
AP Biology
10 reactions
 convert
glucose (6C) to
2 pyruvate (3C)
 produces:
4 ATP & 2 NADH
 consumes:
2 ATP
 net yield:
2 ATP & 2 NADH
glucose
C-C-C-C-C-C
fructose-1,6bP
P-C-C-C-C-C-C-P
DHAP
P-C-C-C
G3P
C-C-C-P
pyruvate
C-C-C
Overview
DHAP = dihydroxyacetone phosphate
G3P = glyceraldehyde-3-phosphate
ATP2
ADP2
ATP4
ADP4
NAD+
2
2Pi
enzyme
enzyme
enzyme enzyme
enzyme
enzyme
enzyme
enzyme
2Pi
2H
2
AP Biology
Glycolysis summary
endergonic
invest some ATP
exergonic
harvest a little
ATP & a little NADH
net yield
2 ATP
2 NADH
4 ATP
ENERGY INVESTMENT
ENERGY PAYOFF
G3P
C-C-C-P
NET YIELD
like $$
in the
bank
-2 ATP
AP Biology
Pi
3
6
4,5
ADP
NAD+
Glucose
hexokinase
phosphoglucose
isomerase
phosphofructokinase
Glyceraldehyde 3
-phosphate (G3P)
Dihydroxyacetone
phosphate
Glucose 6-phosphate
Fructose 6-phosphate
Fructose 1,6-bisphosphate
isomerase
glyceraldehyde
3-phosphate
dehydrogenase
aldolase
1,3-Bisphosphoglycerate
(BPG)
1,3-Bisphosphoglycerate
(BPG)
1
2
ATP
ADP
ATP
NADH
NAD+
NADH
Pi
CH2
C O
CH2OH
P O
CH2 O P
O
CHOH
C
CH2 O P
O
CHOH
CH2 O P
O
CH2OP
O
P
O
CH2
H
CH2OH
O
CH2 P
O
O
CH2OH
P O
1st half of glycolysis (5 reactions)
Glucose “priming”
 get glucose ready
to split
 phosphorylate
glucose
 molecular
rearrangement
 split destabilized
glucose
AP Biology
2nd half of glycolysis (5 reactions)
Payola!
Finally some
ATP!
7
8
H2O
9
10
ADP
ATP
3-Phosphoglycerate
(3PG)
3-Phosphoglycerate
(3PG)
2-Phosphoglycerate
(2PG)
2-Phosphoglycerate
(2PG)
Phosphoenolpyruvate
(PEP)
Phosphoenolpyruvate
(PEP)
Pyruvate Pyruvate
phosphoglycerate
kinase
phosphoglycero-
mutase
enolase
pyruvate kinase
ADP
ATP
ADP
ATP
ADP
ATP
H2O
CH2OH
CH3
CH2
O-
O
C
PH
CHOH
O-
O-
O-
C
C
C
C
C
C
P
P
O
O
O
O
O
O
CH2
NAD+
NADH
NAD+
NADH
Energy Harvest
G3P
C-C-C-P
PiPi
6
DHAP
P-C-C-C
 NADH production
 G3P donates H
 oxidizes the sugar
 reduces NAD+
 NAD+
→ NADH
 ATP production
 G3P → → → pyruvate
 PEP sugar donates P
 “substrate level
phosphorylation”
 ADP → ATP
AP Biology
Substrate-level Phosphorylation
P is transferred
from PEP to ADP
kinase enzyme
ADP → ATP
I get it!
The Pi came
directly from
the substrate!
H2O
9
10
Phosphoenolpyruvate
(PEP)
Phosphoenolpyruvate
(PEP)
Pyruvate Pyruvate
enolase
pyruvate kinase
ADP
ATP
ADP
ATP
H2O
CH3
O-
O
C
O-
C
C
C
P
O
O
O
CH2
 In the last steps of glycolysis, where did
the P come from to make ATP?
 the sugar substrate (PEP)
ATP
AP Biology
Energy accounting of glycolysis
 Net gain = 2 ATP + 2 NADH
 some energy investment (-2 ATP)
 small energy return (4 ATP + 2 NADH)
 1 6C sugar → 2 3C sugars
2 ATP 2 ADP
4 ADP
glucose → → → → →
pyruvate
2x6C 3C
All that work!
And that’s all
I get?
ATP4
2 NAD+
2 But
glucose has
so much more
to give!
AP Biology
Is that all there is?
 Not a lot of energy…
 for 1 billon years+
this is how life on Earth
survived
 no O2 = slow growth, slow reproduction
 only harvest 3.5% of energy stored in glucose
 more carbons to strip off = more energy to harvest
Hard way
to make
a living!
O2
O2
O2
O2
O2
glucose → → → → pyruvate
6C 2x 3C
AP Biology
7
8
H2O
9
10
ADP
ATP
3-Phosphoglycerate
(3PG)
3-Phosphoglycerate
(3PG)
2-Phosphoglycerate
(2PG)
2-Phosphoglycerate
(2PG)
Phosphoenolpyruvate
(PEP)
Phosphoenolpyruvate
(PEP)
Pyruvate Pyruvate
ADP
ATP
ADP
ATP
ADP
ATP
H2O
NAD+
NADH
NAD+
NADH
PiPi 6
Glycolysis
glucose + 2ADP + 2Pi + 2 NAD+
→ 2 pyruvate + 2ATP + 2NADH
But can’t stop there!
 Going to run out of NAD+
 without regenerating NAD+
,
energy production would stop!
 another molecule must accept H
from NADH
 so NAD+
is freed up for another round
PiNAD+
G3P
1,3-BPG 1,3-BPG
NADH
NAD+
NADH
Pi
DHAP
raw materials → products
AP Biology
NADH
pyruvate
acetyl-CoA
lactate
ethanol
NAD+
NAD+
NADH
NAD+
NADH
CO2
acetaldehyde
H2O
Krebs
cycle
O2
lactic acid
fermentation
with oxygen
aerobic respiration
without oxygen
anaerobic respiration
“fermentation”
How is NADH recycled to NAD+
?
Another molecule
must accept H
from NADH
recycle
NADH
which path you
use depends on
who you are…
which path you
use depends on
who you are…
alcohol
fermentation
AP Biology
Fermentation (anaerobic)
 Bacteria, yeast
1C3C 2C
pyruvate → ethanol + CO2
 Animals, some fungi
pyruvate → lactic acid
3C 3C
 beer, wine, bread
 cheese, anaerobic exercise (no O2)
NADH NAD+
NADH NAD+
back to glycolysis→→
back to glycolysis→→
AP Biology
recycle
NADH
Alcohol Fermentation
1C3C 2C
pyruvate → ethanol + CO2
NADH NAD+
Count the
carbons!
Dead end process
 at ~12% ethanol,
kills yeast
 can’t reverse the
reaction
bacteria
yeast
back to glycolysis→→
AP Biology
recycle
NADH
Reversible process
 once O2 is available,
lactate is converted
back to pyruvate by
the liver
Lactic Acid Fermentation
pyruvate → lactic acid
3C 3C
NADH NAD+
→
Count the
carbons!
O2
animals
some fungi
back to glycolysis→→
AP Biology
Pyruvate is a branching point
Pyruvate
O2
O2
mitochondria
Krebs cycle
aerobic respiration
fermentation
anaerobic
respiration
AP Biology 2007-2008
What’s the
point?
The point
is to make
ATP!
ATP
AP Biology
H+
H+
H+
H+
H+ H+
H+H+
H+
And how do we do that?
ATP
But… Have we done that yet?
ADP P+
 ATP synthase
 set up a H+
gradient
 allow H+
to flow
through ATP synthase
 powers bonding
of Pi to ADP
ADP + Pi → ATP
AP Biology 2007-2008
NO!
There’s still more
to my story!
Any Questions?

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Respiration Part2

  • 1. AP Biology 2007-2008 Cellular Respiration Stage 1: Glycolysis
  • 2. AP Biology 2007-2008 What’s the point? The point is to make ATP! ATP
  • 3. AP Biology Glycolysis glucose → → → → → pyruvate 2x6C 3C In the cytosol? Why does that make evolutionary sense? That’s not enough ATP for me!  Breaking down glucose  “glyco – lysis” (splitting sugar)  ancient pathway which harvests energy  where energy transfer first evolved  transfer energy from organic molecules to ATP  still is starting point for ALL cellular respiration  but it’s inefficient  generate only 2 ATP for every 1 glucose  occurs in cytosol
  • 4. AP Biology Evolutionary perspective  Prokaryotes  first cells had no organelles  Anaerobic atmosphere  life on Earth first evolved without free oxygen (O2) in atmosphere  energy had to be captured from organic molecules in absence of O2  Prokaryotes that evolved glycolysis are ancestors of all modern life  ALL cells still utilize glycolysis You mean we’re related? Do I have to invite them over for the holidays? Enzymes of glycolysis are “well-conserved”
  • 5. AP Biology 10 reactions  convert glucose (6C) to 2 pyruvate (3C)  produces: 4 ATP & 2 NADH  consumes: 2 ATP  net yield: 2 ATP & 2 NADH glucose C-C-C-C-C-C fructose-1,6bP P-C-C-C-C-C-C-P DHAP P-C-C-C G3P C-C-C-P pyruvate C-C-C Overview DHAP = dihydroxyacetone phosphate G3P = glyceraldehyde-3-phosphate ATP2 ADP2 ATP4 ADP4 NAD+ 2 2Pi enzyme enzyme enzyme enzyme enzyme enzyme enzyme enzyme 2Pi 2H 2
  • 6. AP Biology Glycolysis summary endergonic invest some ATP exergonic harvest a little ATP & a little NADH net yield 2 ATP 2 NADH 4 ATP ENERGY INVESTMENT ENERGY PAYOFF G3P C-C-C-P NET YIELD like $$ in the bank -2 ATP
  • 7. AP Biology Pi 3 6 4,5 ADP NAD+ Glucose hexokinase phosphoglucose isomerase phosphofructokinase Glyceraldehyde 3 -phosphate (G3P) Dihydroxyacetone phosphate Glucose 6-phosphate Fructose 6-phosphate Fructose 1,6-bisphosphate isomerase glyceraldehyde 3-phosphate dehydrogenase aldolase 1,3-Bisphosphoglycerate (BPG) 1,3-Bisphosphoglycerate (BPG) 1 2 ATP ADP ATP NADH NAD+ NADH Pi CH2 C O CH2OH P O CH2 O P O CHOH C CH2 O P O CHOH CH2 O P O CH2OP O P O CH2 H CH2OH O CH2 P O O CH2OH P O 1st half of glycolysis (5 reactions) Glucose “priming”  get glucose ready to split  phosphorylate glucose  molecular rearrangement  split destabilized glucose
  • 8. AP Biology 2nd half of glycolysis (5 reactions) Payola! Finally some ATP! 7 8 H2O 9 10 ADP ATP 3-Phosphoglycerate (3PG) 3-Phosphoglycerate (3PG) 2-Phosphoglycerate (2PG) 2-Phosphoglycerate (2PG) Phosphoenolpyruvate (PEP) Phosphoenolpyruvate (PEP) Pyruvate Pyruvate phosphoglycerate kinase phosphoglycero- mutase enolase pyruvate kinase ADP ATP ADP ATP ADP ATP H2O CH2OH CH3 CH2 O- O C PH CHOH O- O- O- C C C C C C P P O O O O O O CH2 NAD+ NADH NAD+ NADH Energy Harvest G3P C-C-C-P PiPi 6 DHAP P-C-C-C  NADH production  G3P donates H  oxidizes the sugar  reduces NAD+  NAD+ → NADH  ATP production  G3P → → → pyruvate  PEP sugar donates P  “substrate level phosphorylation”  ADP → ATP
  • 9. AP Biology Substrate-level Phosphorylation P is transferred from PEP to ADP kinase enzyme ADP → ATP I get it! The Pi came directly from the substrate! H2O 9 10 Phosphoenolpyruvate (PEP) Phosphoenolpyruvate (PEP) Pyruvate Pyruvate enolase pyruvate kinase ADP ATP ADP ATP H2O CH3 O- O C O- C C C P O O O CH2  In the last steps of glycolysis, where did the P come from to make ATP?  the sugar substrate (PEP) ATP
  • 10. AP Biology Energy accounting of glycolysis  Net gain = 2 ATP + 2 NADH  some energy investment (-2 ATP)  small energy return (4 ATP + 2 NADH)  1 6C sugar → 2 3C sugars 2 ATP 2 ADP 4 ADP glucose → → → → → pyruvate 2x6C 3C All that work! And that’s all I get? ATP4 2 NAD+ 2 But glucose has so much more to give!
  • 11. AP Biology Is that all there is?  Not a lot of energy…  for 1 billon years+ this is how life on Earth survived  no O2 = slow growth, slow reproduction  only harvest 3.5% of energy stored in glucose  more carbons to strip off = more energy to harvest Hard way to make a living! O2 O2 O2 O2 O2 glucose → → → → pyruvate 6C 2x 3C
  • 12. AP Biology 7 8 H2O 9 10 ADP ATP 3-Phosphoglycerate (3PG) 3-Phosphoglycerate (3PG) 2-Phosphoglycerate (2PG) 2-Phosphoglycerate (2PG) Phosphoenolpyruvate (PEP) Phosphoenolpyruvate (PEP) Pyruvate Pyruvate ADP ATP ADP ATP ADP ATP H2O NAD+ NADH NAD+ NADH PiPi 6 Glycolysis glucose + 2ADP + 2Pi + 2 NAD+ → 2 pyruvate + 2ATP + 2NADH But can’t stop there!  Going to run out of NAD+  without regenerating NAD+ , energy production would stop!  another molecule must accept H from NADH  so NAD+ is freed up for another round PiNAD+ G3P 1,3-BPG 1,3-BPG NADH NAD+ NADH Pi DHAP raw materials → products
  • 13. AP Biology NADH pyruvate acetyl-CoA lactate ethanol NAD+ NAD+ NADH NAD+ NADH CO2 acetaldehyde H2O Krebs cycle O2 lactic acid fermentation with oxygen aerobic respiration without oxygen anaerobic respiration “fermentation” How is NADH recycled to NAD+ ? Another molecule must accept H from NADH recycle NADH which path you use depends on who you are… which path you use depends on who you are… alcohol fermentation
  • 14. AP Biology Fermentation (anaerobic)  Bacteria, yeast 1C3C 2C pyruvate → ethanol + CO2  Animals, some fungi pyruvate → lactic acid 3C 3C  beer, wine, bread  cheese, anaerobic exercise (no O2) NADH NAD+ NADH NAD+ back to glycolysis→→ back to glycolysis→→
  • 15. AP Biology recycle NADH Alcohol Fermentation 1C3C 2C pyruvate → ethanol + CO2 NADH NAD+ Count the carbons! Dead end process  at ~12% ethanol, kills yeast  can’t reverse the reaction bacteria yeast back to glycolysis→→
  • 16. AP Biology recycle NADH Reversible process  once O2 is available, lactate is converted back to pyruvate by the liver Lactic Acid Fermentation pyruvate → lactic acid 3C 3C NADH NAD+ → Count the carbons! O2 animals some fungi back to glycolysis→→
  • 17. AP Biology Pyruvate is a branching point Pyruvate O2 O2 mitochondria Krebs cycle aerobic respiration fermentation anaerobic respiration
  • 18. AP Biology 2007-2008 What’s the point? The point is to make ATP! ATP
  • 19. AP Biology H+ H+ H+ H+ H+ H+ H+H+ H+ And how do we do that? ATP But… Have we done that yet? ADP P+  ATP synthase  set up a H+ gradient  allow H+ to flow through ATP synthase  powers bonding of Pi to ADP ADP + Pi → ATP
  • 20. AP Biology 2007-2008 NO! There’s still more to my story! Any Questions?

Editor's Notes

  1. Why does it make sense that this happens in the cytosol? Who evolved first?
  2. The enzymes of glycolysis are very similar among all organisms. The genes that code for them are highly conserved. They are a good measure for evolutionary studies. Compare eukaryotes, bacteria & archaea using glycolysis enzymes. Bacteria = 3.5 billion years ago glycolysis in cytosol = doesn’t require a membrane-bound organelle O2 = 2.7 billion years ago photosynthetic bacteria / proto-blue-green algae Eukaryotes = 1.5 billion years ago membrane-bound organelles! Processes that all life/organisms share: Protein synthesis Glycolysis DNA replication
  3. 1st ATP used is like a match to light a fire… initiation energy / activation energy. Destabilizes glucose enough to split it in two
  4. Glucose is a stable molecule it needs an activation energy to break it apart. phosphorylate it = Pi comes from ATP. make NADH & put it in the bank for later.
  5. And that’s how life subsisted for a billion years. Until a certain bacteria ”learned” how to metabolize O2; which was previously a poison. But now pyruvate is not the end of the process Pyruvate still has a lot of energy in it that has not been captured. It still has 3 carbons bonded together! There is still energy stored in those bonds. It can still be oxidized further.
  6. So why does glycolysis still take place?
  7. Count the carbons!! Lactic acid is not a dead end like ethanol. Once you have O2 again, lactate is converted back to pyruvate by the liver and fed to the Kreb’s cycle.