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Fig. 1: Opening and closing of a
membrane protein ion-channel [1].
Student Paper
A Novel CMOS Integrated Amplifier for Sensing
Single Ion-Channel Current in Biological Cells
Santosh Pandey, Akwete Bortei-Doku, Marvin H. White
Sherman Fairchild Center, Electrical Engineering Dept., Lehigh University, Bethlehem, PA-18015
The membrane of biological cells is embedded with protein
macromolecules called ion-channels that regulate the ion flux by unique
gating mechanisms. Charged amino acids are present in a voltage-
sensitive region of the ion-channel, the movement of which leads to a
channel’s conformational changes i.e. open and closed states (Fig. 1).
Today, electrophysiology tools enable us to record the behavior of these
ion-channels: gating, conductivity, specificity, and selectivity [2].
A single ion-channel current can be said to be a random telegraph
signal with current fluctuations of ~1.5-2.5kHz and open-state current
amplitudes of ~5-8pA [2]. Sensing and amplifying such low-level
currents in a low-noise environment is a challenging task. An amplifier
for this purpose should be a sensitive current-to-voltage (I-V) converter, converting ion-channel currents
into voltage signals for observation with an oscilloscope or sampled and stored in a computer. Commercial
transimpedance amplifiers follow approaches that require the use of large, discrete electrical components,
which limits signal-handling bandwidth, incorporates noise and adds to the costs of ion-channel signal
processing [3]. To circumvent these problems, there is a drive towards miniaturization, high-throughput
and lab-on-chip (LoC) systems and a concomitant need to design an advanced integrated signal processor
for single ion-channel recording.
Here, we present a novel integrated CMOS transimpedance amplifier that permits the recording of low-
level, single-channel, fast transient ion-channel currents over a wide dynamic range (1–5 kHz). The
amplifier consists of an initial integrator stage, a post integrating differential stage with gain GPOST-INT, a
clamp stage, a discrete-time differentiator stage, a pre-filter differential amplifier stage with gain GPRE-
FILTER, and a low pass filtering stage with gain GFILTER, as shown in Fig. 2. The amplifier operates in three
modes: the reset mode, the clamp mode and the normal signal-handling mode. During the reset mode, the
reset switch φreset is closed to discharge the integrating capacitor CINT. Subsequently, the clamp mode starts
wherein the clamp switch φClamp stores the offset level. After this reset-and-clamp operation, the normal
signal-handling mode begins where the input signal IINPUT is sensed. The integrator integrates the
incoming pulses, two clocks φS1 and φS2 sample the integrated signal, discrete-time differentiation is
performed, followed by post amplification and filtering. Offset cancellation and noise suppression is
performed with Correlated Double Sampling (CDS) [4]. Clock feed-through in switches is minimized
using CMOS transmission-gate switches with small overlap capacitance.
The chip is fabricated by MOSIS using an AMIS 1.5µm n-well CMOS process technology with 1 metal
layers and 2 poly layers. The chip (2.2mm x 2.2mm) is packaged in a 40-pin DIP. Testing is performed
with a 5nA current generated by applying 100mV pulses across a 20MΩ resistor. The results at various
nodes of the amplifier circuit are shown in Figs. 3 - 6. A simple calculation shows the output voltage is
300mV, in accordance to the waveform in Fig. 5.
( ) ( )( ) mV
pF
M
mV
G
G
f
G
C
I
V FILTER
FILTER
PRE
CLK
SAMPLING
INT
POST
INT
INPUT
O 300
3
10
10
10
500
1
20
100
)
( 4
=




















Ω
=
















= −
−
−
This ion-channel signal processor achieves low-noise front end, input offset cancellation, ultra-high gain,
fast-transient signal processing, and CMOS compatibility. We have been able to process currents as low as
~200pA operating at 1–5 kHz using our present breadboard setup. However, to test current levels in actual
ion-channel recording, we are in the process of developing a PCB to reduce external noise sources. Our
goal is to build a lab-on-chip (LoC) for electrophysiology where we will integrate this amplifier design
into a BioMEMS platform [5].
1-4244-0084-8/05/$20.00/©2005 IEEE
Authorized licensed use limited to: Iowa State University. Downloaded on May 16,2022 at 19:30:02 UTC from IEEE Xplore. Restrictions apply.
Acknowledgements: This work is supported by the National Science Foundation on grant ECS-0524049
and the Sherman Fairchild Foundation of Lehigh University. We thank MOSIS for the chip fabrication.
References
1. Sigworth, Nature, vol. 423, pp. 21-22, 2003.
2. Sigworth, Single-Channel Recording, 2nd
ed., Plenum Press, pp. 3-34, 1995.
3. http://www.moleculardevices.com/pages/instruments/cn_axopatch200b.html
4. M. H. White et al., IEEE J. Solid-State Circuits, vol. SC-9, pp.1-13, 1974.
5. S. Pandey, Z. Ferdous and M. H. White, Intl. Conf. Smart Mat., Struct. and Syst., pp.172-176, 2002.
Fig. 6: Snapshots at 4 nodes: VINPUT (top), post-
differentiation V2 (second), pre-filtering (third),
and post-filtering (bottom).
Fig. 5: Snapshots at 3 nodes: VINPUT (top), post-
differentiation V2 (middle), sampling stage (bottom).
Fig. 4: Snapshots at 3 nodes: input VINPUT (top),
2nd
stage V1 (middle), sampling stage (bottom).
Fig. 3: 40-pin CMOS amplifier fabricated with
SCMOS n-well technology. (900µm x 900µm).
Fig. 2: Block diagram of our CMOS transimpedance amplifier. The input is the simulated current pulses
(5nA, 1 kHz) obtained by passing 100mVPP voltage pulses through a 20MΩ resistor. The output is 300mV.
VINPUT
(100mVPP)
Authorized licensed use limited to: Iowa State University. Downloaded on May 16,2022 at 19:30:02 UTC from IEEE Xplore. Restrictions apply.

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A Novel CMOS Integrated Amplifier for Sensing Single Ion-Channel Current in Biological Cells

  • 1. Fig. 1: Opening and closing of a membrane protein ion-channel [1]. Student Paper A Novel CMOS Integrated Amplifier for Sensing Single Ion-Channel Current in Biological Cells Santosh Pandey, Akwete Bortei-Doku, Marvin H. White Sherman Fairchild Center, Electrical Engineering Dept., Lehigh University, Bethlehem, PA-18015 The membrane of biological cells is embedded with protein macromolecules called ion-channels that regulate the ion flux by unique gating mechanisms. Charged amino acids are present in a voltage- sensitive region of the ion-channel, the movement of which leads to a channel’s conformational changes i.e. open and closed states (Fig. 1). Today, electrophysiology tools enable us to record the behavior of these ion-channels: gating, conductivity, specificity, and selectivity [2]. A single ion-channel current can be said to be a random telegraph signal with current fluctuations of ~1.5-2.5kHz and open-state current amplitudes of ~5-8pA [2]. Sensing and amplifying such low-level currents in a low-noise environment is a challenging task. An amplifier for this purpose should be a sensitive current-to-voltage (I-V) converter, converting ion-channel currents into voltage signals for observation with an oscilloscope or sampled and stored in a computer. Commercial transimpedance amplifiers follow approaches that require the use of large, discrete electrical components, which limits signal-handling bandwidth, incorporates noise and adds to the costs of ion-channel signal processing [3]. To circumvent these problems, there is a drive towards miniaturization, high-throughput and lab-on-chip (LoC) systems and a concomitant need to design an advanced integrated signal processor for single ion-channel recording. Here, we present a novel integrated CMOS transimpedance amplifier that permits the recording of low- level, single-channel, fast transient ion-channel currents over a wide dynamic range (1–5 kHz). The amplifier consists of an initial integrator stage, a post integrating differential stage with gain GPOST-INT, a clamp stage, a discrete-time differentiator stage, a pre-filter differential amplifier stage with gain GPRE- FILTER, and a low pass filtering stage with gain GFILTER, as shown in Fig. 2. The amplifier operates in three modes: the reset mode, the clamp mode and the normal signal-handling mode. During the reset mode, the reset switch φreset is closed to discharge the integrating capacitor CINT. Subsequently, the clamp mode starts wherein the clamp switch φClamp stores the offset level. After this reset-and-clamp operation, the normal signal-handling mode begins where the input signal IINPUT is sensed. The integrator integrates the incoming pulses, two clocks φS1 and φS2 sample the integrated signal, discrete-time differentiation is performed, followed by post amplification and filtering. Offset cancellation and noise suppression is performed with Correlated Double Sampling (CDS) [4]. Clock feed-through in switches is minimized using CMOS transmission-gate switches with small overlap capacitance. The chip is fabricated by MOSIS using an AMIS 1.5µm n-well CMOS process technology with 1 metal layers and 2 poly layers. The chip (2.2mm x 2.2mm) is packaged in a 40-pin DIP. Testing is performed with a 5nA current generated by applying 100mV pulses across a 20MΩ resistor. The results at various nodes of the amplifier circuit are shown in Figs. 3 - 6. A simple calculation shows the output voltage is 300mV, in accordance to the waveform in Fig. 5. ( ) ( )( ) mV pF M mV G G f G C I V FILTER FILTER PRE CLK SAMPLING INT POST INT INPUT O 300 3 10 10 10 500 1 20 100 ) ( 4 =                     Ω =                 = − − − This ion-channel signal processor achieves low-noise front end, input offset cancellation, ultra-high gain, fast-transient signal processing, and CMOS compatibility. We have been able to process currents as low as ~200pA operating at 1–5 kHz using our present breadboard setup. However, to test current levels in actual ion-channel recording, we are in the process of developing a PCB to reduce external noise sources. Our goal is to build a lab-on-chip (LoC) for electrophysiology where we will integrate this amplifier design into a BioMEMS platform [5]. 1-4244-0084-8/05/$20.00/©2005 IEEE Authorized licensed use limited to: Iowa State University. Downloaded on May 16,2022 at 19:30:02 UTC from IEEE Xplore. Restrictions apply.
  • 2. Acknowledgements: This work is supported by the National Science Foundation on grant ECS-0524049 and the Sherman Fairchild Foundation of Lehigh University. We thank MOSIS for the chip fabrication. References 1. Sigworth, Nature, vol. 423, pp. 21-22, 2003. 2. Sigworth, Single-Channel Recording, 2nd ed., Plenum Press, pp. 3-34, 1995. 3. http://www.moleculardevices.com/pages/instruments/cn_axopatch200b.html 4. M. H. White et al., IEEE J. Solid-State Circuits, vol. SC-9, pp.1-13, 1974. 5. S. Pandey, Z. Ferdous and M. H. White, Intl. Conf. Smart Mat., Struct. and Syst., pp.172-176, 2002. Fig. 6: Snapshots at 4 nodes: VINPUT (top), post- differentiation V2 (second), pre-filtering (third), and post-filtering (bottom). Fig. 5: Snapshots at 3 nodes: VINPUT (top), post- differentiation V2 (middle), sampling stage (bottom). Fig. 4: Snapshots at 3 nodes: input VINPUT (top), 2nd stage V1 (middle), sampling stage (bottom). Fig. 3: 40-pin CMOS amplifier fabricated with SCMOS n-well technology. (900µm x 900µm). Fig. 2: Block diagram of our CMOS transimpedance amplifier. The input is the simulated current pulses (5nA, 1 kHz) obtained by passing 100mVPP voltage pulses through a 20MΩ resistor. The output is 300mV. VINPUT (100mVPP) Authorized licensed use limited to: Iowa State University. Downloaded on May 16,2022 at 19:30:02 UTC from IEEE Xplore. Restrictions apply.