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Dr. Jeff Camper, PhD
Dr. Paul Zwiers, PhD
Shahbaz Mushtaq
 Hyla

andersonii
 1.5-2 inches in
length
 Green with dark
stripes
 Large toe pads
 Orange/Gold
Markings on legs
 Bushy

areas
 Shallow ponds
 Thick moss
 Terrestrial/near water
 Low pH, 3.8-5.9
• New Jersey
• North/South Carolina
• Florida/Alabama

Figure from Anderson
et. al. 2004
 Fragmentation

population.

of a larger historical
 Migration

and colonization of new habitats.

Figure from Anderson
et. al. 2004
 Samples

from each location
 Genetic information to measure allelic
variation
 Genetic signal supports which hypothesis
Data from Anderson
et. al. 2004
 DNA Analysis
 Polymerase

Chain Reaction (PCR)
 Gel Electrophoresis
 Mitochondrial

Genes used in past
 Results from mitochondrial genes
inconclusive
 Additional Information needed
 Test

new primers
 Amplify new gene regions
 Run gel electrophoresis
Temperature
tRNApheL/tRNAvalH
16Sh/12L1
12Sm/16Sa
16Sc/16Sd
MVZ15-L/CytbAR-H
MVZ25-L/CytbAR-H

42

44

46

48

50

52

55
 Presence

of bands
 Length of bands
Temperature

42

44

46

48

50

52

55

tRNApheL/tRNAvalH

x

x

x

x

x

x

x

16Sh/12L1

x

x

x

x

x

x

x

12Sm/16Sa

x

x

x

x

x

x

x

16Sc/16Sd

x

x

x

x

x

x

x

MVZ15-L/CytbAR-H

o

o

x

√

o

o

o

MVZ25-L/CytbAR-H

x

x

x

x

x

x

x
 Changing

primers
 New PCR machine
 Collaboration with USC-Columbia to
sequence gene regions
 Advisors

Dr. Jeff Camper, PhD
Dr. Paul Zwiers, PhD
 Funding
REAL Program at FMU
 Collaborators
Dr. Joseph Quattro, PhD, USC-Columbia
Mark Roberts, USC- Columbia
Dr. Pearl Fernandes, PhD, USC-Sumter

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The pine barrens tree frog

Editor's Notes

  1. 3 isolated populations
  2. Using samples from each of the 3 locationsGenetic information used to describe allelic variation in each of the isolated populationsGenetic signal follows hypothesis 1 or 2
  3. Previous work done by Anderson et. Al. 20042 mitochondrial gene regions which totalled approximately 900 base pairs of mitochondrial data in their analysis344 base pairs from Cytb535 bp from 16sBoth from mitochondrial lociFound considerable variation combined within north and south carolina populations but relatively little variation in NJ and FL populations. With so little data, there is not enough information to tell if the genetic signal was a true phylogenetic signal or a bias of the dataResults inconclusive because not enough information available Using additional genetic information from mitochondrial and nuclear gene regions
  4. 3 stages of PCR Denaturation – dna molecule separates annealing stage- primers will anneal to the appropriate sequence elongation stage- taq polymerase builds the complementary strandUltimately amplifies the gene region of interestUse gel electrophoresis to see whether PCR was successful and whether the appropriate region was amplified based on fragment length