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MCAT
Prep
Exam
PowerPoint® Lecture Slides are prepared by Dr. Isaac Barjis, Biology Instructor 1
Cell Structure and
Function
Prepared by Gezim Balliu
2
Cell Theory
 Cell was not discovered untill the development of
Microscope
 Detailed study of the cell began in the 1830s
 A unifying concept in biology
 States that:
 All organisms are composed of cells
 All cells come only from preexisting cells
 Cells are the smallest structural and functional unit of
organisms
 Cells carry genetic information in the form of DNA
3
Sizes of Living Things
4
Cell Size
 Cells range in size from one millimeter down to
one micrometer
 Cells need a large surface area of plasma
membrane to adequately exchange materials.
 The surface-area-to-volume ratio requires that
cells be small
5
Microscopy Today: Compound Light
Microscope
 Light passed through specimen
 Focused by glass lenses
 Max magnification about 1000X
 Resolves objects separated by 0.2 mm, 500X
better than human eye
 Resolution is limited by the wavelength of light
(nanometer)
6
Compound Light Microscope
 Diaphragm – controls
amount of light –
important for image
contrast
 Coarse Adjustment Knob
– focuses the image
 Fine Adjustment Knob –
finely focuses the image
7
Microscopy Today: Transmission
Electron Microscope
 Abbreviated T.E.M.
 Uses a beam of electrons to allow 100 fold higher
magnification
 Because it uses beam of electrons, its resolution is at
the atomic level (picometer)
 Tissue must be fixed and sectioned
 Can living specimen be examined by T.E.M?
8
Transmission Electron Microscope
9
Microscopy Today: Immunofluorescence
Light Microscope
 Antibodies developed against a specific protein
 Fluorescent dye molecule attached to antibody
molecules
 Specimen exposed to fluorescent antibodies
 Ultra-violet light (black light) passed through
specimen
 Fluorescent dye glows in color where antigen is
located
 Emitted light is focused by glass lenses onto human
retina
 Allows mapping distribution of a specific protein
in cell
10
Microscopy and Amoeba proteus
Cells Under the Microscope
 phase-contrast light microscope - look at
unstained living animal cells.
 electron microscope - look at organelles
e.g. ribosomes.
 fluorescence microscope - look at a living
cell expressing green fluorescent protein or
to do confocal microscopy.
Autoradiography
 Radioactive compounds decay or transform
into other compounds or elements.
 An autoradiograph is an image on an x-
ray film or nuclear emulsion produced by
the pattern of decay emissions (e.g., beta
particles or gamma rays) from a distribution
of a radioactive substance
 Autoradiography can also uses radioactive
molecule to study biochemical activity,
Protein synthesis
12
13
Cell Fractionation and Differential
Centrifugation
 Cell fractionation is the breaking apart of
cellular components
 Differential centrifugation:
 Allows separation of cell parts
 Separated out by size & density
 Works like spin cycle of washer
 The faster the machine spins, the smaller
the parts that are settled out
14
Cell Fractionation and Differential
Centrifugation
Eukaryotes Vs Prokaryotes
Eukaryotic Cells Prokaryotic Cells
The cells of “complex” organisms,
including all plants, Protists, fungi and
animals
“Simple” organisms, including
bacteria and cyanobacteria
(blue-green algae)
Contain a nucleus and membrane
bound organelles
Lack a nucleus and other
membrane-encased organelles.
Can specialize for certain functions,
such as absorbing nutrients from food
or transmitting nerve impulses;
multicellular organs and organisms
Usually exist as single, virtually
identical cells
Cell Wall present in Plants and Fungi
only
Ribosome: 40s, 60S
Cell Wall
Ribosome: 30S, 50S
15
16
The Structure of Bacteria
 Occur in three basic shapes:
 Spherical coccus,
 Rod-shaped bacillus,
 Spiral spirillum (if rigid) or spirochete (if flexible).
 Cell Envelope includes:
 Plasma membrane - lipid bilayer with imbedded and peripheral
protein
 Cell wall - maintains the shape of the cell
17
The Structure of Bacteria
18
The Structure of Bacteria
19
The Structure of Bacteria Cytoplasm &
Appendages
 Cytoplasm
 Semifluid solution
 Bounded by plasma membrane
 Contains water, inorganic and organic molecules, and enzymes.
 Nucleoid is a region that contains the single, circular DNA
molecule.
 Plasmids are small accessory (extrachromosomal) rings of DNA
 Appendages
 Flagella – Provide motility
 Fimbriae – small, bristle-like fibers that sprout from the cell
surface
 Sex pili – rigid tubular structures used to pass DNA from cell to
cell
20
Eukaryotic Cells
 Domain Eukarya includes:
 Protists
 Fungi
 Plants
 Animals
 Cells contain:
 Membrane-bound nucleus that houses DNA
 Specialized organelles
 Plasma membrane
 Much larger than prokaryotic cells
 Some cells (e.g., plant cells) have a cell wall
21
Hypothesized Origin of Eukaryotic Cells
22
Eukaryotic Cells: Organelles
 Eukaryotic cells are compartmentalized
 They contain small structures called organelles
 Perform specific functions
 Isolates reactions from others
 Two classes of organelles:
 Endomembrane system:
 Organelles that communicate with one another
 Via membrane channels
 Via small vesicles
 Energy related organelles
 Mitochondria & chloroplasts
 Basically independent & self-sufficient
23
Plasma Membrane
24
Animal Cell Anatomy
25
Plant Cell Anatomy
Cytosole
 Cytosol, contains many long, fine filaments
of protein that are responsible for cell
shape and structure and thereby form the
cell’s cytoskeleton
26
27
Nucleus
 Command center of cell, usually near center
 Separated from cytoplasm by nuclear envelope
 Consists of double layer of membrane
 Nuclear pores permit exchange between nucleoplasm
& cytoplasm
 Contains chromatin in semifluid nucleoplasm
 Chromatin contains DNA of genes, and proteins
(Histones)
 Condenses to form chromosomes
 Chromosomes are formed during cell division
 Nucleolus is a dense structure in the nucleus
 Synthesize ribosome RNA (rRNA)
28
Anatomy of the Nucleus
29
Ribosomes
 Are the site of protein synthesis in the cell
 Composed of rRNA and protein
 Consists of a large subunit and a small subunit
 Subunits made in nucleolus
 May be located:
 On the endoplasmic reticulum (thereby making it
“rough”), or
 Free in the cytoplasm
30
Nucleus, Ribosomes, & ER
31
Endomembrane System
 Series of intracellular membranes that
compartmentalize the cell
 Restrict enzymatic reactions to specific
compartments within cell
 Consists of:
 Nuclear envelope
 Membranes of endoplasmic reticulum
 Golgi apparatus
 Vesicles
 Several types
 Transport materials between organelles of system
32
Endomembrane System:
The Endoplasmic Reticulum
 A system of membrane channels and saccules (flattened vesicles)
continuous with the outer membrane of the nuclear envelope
 Rough ER
 Studded with ribosomes on cytoplasmic side
 Protein anabolism
 Synthesizes proteins
 Modifies and processes proteins
 Adds sugar to protein
 Results in glycoproteins
 Smooth ER
 No ribosomes
 Synthesis of lipids
 Site of various synthetic processes, detoxification, and storage
 Forms transport vesicles
33
Endoplasmic Reticulum
34
Endomembrane System:
The Golgi Apparatus
 Golgi Apparatus
 Consists of flattened, curved saccules
 Resembles stack of hollow pancakes
 Modifies proteins and lipids
 Receives vesicles from ER on cis (or inner face)
 Modifies them and repackages them in vesicles
 Release the vesicles from trans (or outer face)
 Within cell
 Export from cell (secretion, exocytosis)
35
Golgi Apparatus
36
Endomembrane System: Lysosomes
 Membrane-bound vesicles (not in plants)
 Produced by the Golgi apparatus
 Contain powerful digestive enzymes and are highly
acidic
 Digestion of large molecules
 Recycling of cellular debris and resources
 Autolysis may occur in injured or dying cell to cause apoptosis
(programmed cell death, like tadpole losing tail)
37
Lysosomes
38
Endomembrane System: Summary
 Proteins produced in rough ER and lipids from
smooth ER are carried in vesicles to the Golgi
apparatus.
 The Golgi apparatus modifies these products and
then sorts and packages them into vesicles that
go to various cell destinations.
 Secretory vesicles carry products to the
membrane where exocytosis produces
secretions.
 Lysosomes fuse with incoming vesicles and
digest macromolecules.
39
Endomembrane System: A Visual Summary
40
Peroxisomes
 Similar to lysosomes
 Membrane-bounded vesicles
 Enclose enzymes that rid the cell of toxic peroxides
 Participate in the metabolism of fatty acids and many
other metabolites
41
Peroxisomes
42
Vacuoles
 Membranous sacs that are larger than vesicles
 Store materials that occur in excess
 Others very specialized (contractile vacuole)
 Plants cells typically have a central vacuole
 Up to 90% volume of some cells
 Functions in:
 Storage of water, nutrients, pigments, and waste products
 Development of turgor pressure
 Some functions performed by lysosomes in other eukaryotes
43
Vacuoles
44
Energy-Related Organelles:
Chloroplast Structure
 Bounded by double membrane
 Inner membrane infolded
 Forms disc-like thylakoids, which are stacked to form
grana
 Suspended in semi-fluid stroma
 Chlorophyll
 Green photosynthetic pigment
 Chlorophyll capture solar energy
45
Energy-Related Organelles: Chloroplasts
 Serve as the site of photosynthesis
 Captures light energy to drive cellular machinery
 Photosynthesis
 Synthesizes carbohydrates from CO2 & H2O
 Makes own food using CO2 as only carbon source
 Inorganic molecules (Energy-poor compounds) are converted to organic
molecules (energy-rich compounds)
 Only plants, algae, and certain bacteria are capable of conducting
photosynthesis
46
Chloroplast Structure
47
Energy-Related Organelles: Mitochondria
 Smaller than chloroplast
 Contain ribosomes and their own DNA
 Surrounded by a double membrane
 Inner membrane surrounds the matrix and is convoluted (folds) to form
cristae.
 Matrix – Inner semifluid containing respiratory enzymes
 Break down carbohydrates
 Involved in cellular respiration
 Produce most of ATP utilized by the cell
 Contain their own DNA and ribosome i.e. they are semiautonomous
 Inherited from Oocyte
48
Mitochondrial Structure
Mitochondrial Origin Hypothesis
49
50
The Cytoskeleton
 Maintains cell shape
 Assists in movement of cell and organelles
 Aids movement of materials in and out of cells
 Three types of macromolecular fibers
 Microfilament
 Intermediate Filaments
 Microtubules
 Assemble and disassemble as needed
51
The Cytoskeleton: Actin Filaments
 Microfilament are rods of actin
 Extremely thin filaments like twisted pearl
necklace
 Support for microvilli in intestinal cells
 Intracellular traffic control
 For moving stuff around within cell
 Cytoplasmic streaming
 Function in pseudopods of amoeboid cells
 Important component in muscle contraction
52
The Cytoskeleton: Actin Filament Operation
53
The Cytoskeleton: Intermediate Filaments
 Intermediate in size between actin filaments and
microtubules
 Rope-like assembly of fibrous polypeptides
 Functions:
 Support nuclear envelope
 Cell-cell junctions, like those holding skin cells tightly
together
54
The Cytoskeleton: Microtubules
 Hollow cylinders made of two globular proteins called
a and b tubulin
 Spontaneous pairing of a and b tubulin molecules
form structures called dimers
 Dimers then arrange themselves into tubular spirals
of 13 dimers around
 Assembly:
 Under control of Microtubule Organizing Center (MTOC)
 Most important MTOC is centrosome
 Function:
 Provide framework for movement of organelle within cell
 Direct separation of chromosomes during cell division (e.g.
Centrioles are composed of microtubules)
 Provide locomotion and movement (e.g. flagella and cilia)
55
The Cytoskeleton: Microtubule Operation
56
The Cytoskeleton
57
Microtubular Arrays: Centrioles
 Short, hollow cylinders
 One pair per animal cell
 Located in centrosome of animal cells
 Oriented at right angles to each other
 Separate during mitosis to determine plane of division
58
Cytoskeleton: Centrioles
59
Microtubular Arrays: Cilia and Flagella
 Hair-like projections from cell surface that aid in
cell movement
 In eukaryotes, cilia are much shorter than flagella
 Cilia move in coordinated waves like oars
 Flagella move like a propeller or cork screw
60
Structure of a Flagellum
61
Comparison of Prokaryotic and
Eukaryotic Cells
62

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Lecture 1 Cell.ppt

  • 1. MCAT Prep Exam PowerPoint® Lecture Slides are prepared by Dr. Isaac Barjis, Biology Instructor 1 Cell Structure and Function Prepared by Gezim Balliu
  • 2. 2 Cell Theory  Cell was not discovered untill the development of Microscope  Detailed study of the cell began in the 1830s  A unifying concept in biology  States that:  All organisms are composed of cells  All cells come only from preexisting cells  Cells are the smallest structural and functional unit of organisms  Cells carry genetic information in the form of DNA
  • 4. 4 Cell Size  Cells range in size from one millimeter down to one micrometer  Cells need a large surface area of plasma membrane to adequately exchange materials.  The surface-area-to-volume ratio requires that cells be small
  • 5. 5 Microscopy Today: Compound Light Microscope  Light passed through specimen  Focused by glass lenses  Max magnification about 1000X  Resolves objects separated by 0.2 mm, 500X better than human eye  Resolution is limited by the wavelength of light (nanometer)
  • 6. 6 Compound Light Microscope  Diaphragm – controls amount of light – important for image contrast  Coarse Adjustment Knob – focuses the image  Fine Adjustment Knob – finely focuses the image
  • 7. 7 Microscopy Today: Transmission Electron Microscope  Abbreviated T.E.M.  Uses a beam of electrons to allow 100 fold higher magnification  Because it uses beam of electrons, its resolution is at the atomic level (picometer)  Tissue must be fixed and sectioned  Can living specimen be examined by T.E.M?
  • 9. 9 Microscopy Today: Immunofluorescence Light Microscope  Antibodies developed against a specific protein  Fluorescent dye molecule attached to antibody molecules  Specimen exposed to fluorescent antibodies  Ultra-violet light (black light) passed through specimen  Fluorescent dye glows in color where antigen is located  Emitted light is focused by glass lenses onto human retina  Allows mapping distribution of a specific protein in cell
  • 11. Cells Under the Microscope  phase-contrast light microscope - look at unstained living animal cells.  electron microscope - look at organelles e.g. ribosomes.  fluorescence microscope - look at a living cell expressing green fluorescent protein or to do confocal microscopy.
  • 12. Autoradiography  Radioactive compounds decay or transform into other compounds or elements.  An autoradiograph is an image on an x- ray film or nuclear emulsion produced by the pattern of decay emissions (e.g., beta particles or gamma rays) from a distribution of a radioactive substance  Autoradiography can also uses radioactive molecule to study biochemical activity, Protein synthesis 12
  • 13. 13 Cell Fractionation and Differential Centrifugation  Cell fractionation is the breaking apart of cellular components  Differential centrifugation:  Allows separation of cell parts  Separated out by size & density  Works like spin cycle of washer  The faster the machine spins, the smaller the parts that are settled out
  • 14. 14 Cell Fractionation and Differential Centrifugation
  • 15. Eukaryotes Vs Prokaryotes Eukaryotic Cells Prokaryotic Cells The cells of “complex” organisms, including all plants, Protists, fungi and animals “Simple” organisms, including bacteria and cyanobacteria (blue-green algae) Contain a nucleus and membrane bound organelles Lack a nucleus and other membrane-encased organelles. Can specialize for certain functions, such as absorbing nutrients from food or transmitting nerve impulses; multicellular organs and organisms Usually exist as single, virtually identical cells Cell Wall present in Plants and Fungi only Ribosome: 40s, 60S Cell Wall Ribosome: 30S, 50S 15
  • 16. 16 The Structure of Bacteria  Occur in three basic shapes:  Spherical coccus,  Rod-shaped bacillus,  Spiral spirillum (if rigid) or spirochete (if flexible).  Cell Envelope includes:  Plasma membrane - lipid bilayer with imbedded and peripheral protein  Cell wall - maintains the shape of the cell
  • 19. 19 The Structure of Bacteria Cytoplasm & Appendages  Cytoplasm  Semifluid solution  Bounded by plasma membrane  Contains water, inorganic and organic molecules, and enzymes.  Nucleoid is a region that contains the single, circular DNA molecule.  Plasmids are small accessory (extrachromosomal) rings of DNA  Appendages  Flagella – Provide motility  Fimbriae – small, bristle-like fibers that sprout from the cell surface  Sex pili – rigid tubular structures used to pass DNA from cell to cell
  • 20. 20 Eukaryotic Cells  Domain Eukarya includes:  Protists  Fungi  Plants  Animals  Cells contain:  Membrane-bound nucleus that houses DNA  Specialized organelles  Plasma membrane  Much larger than prokaryotic cells  Some cells (e.g., plant cells) have a cell wall
  • 21. 21 Hypothesized Origin of Eukaryotic Cells
  • 22. 22 Eukaryotic Cells: Organelles  Eukaryotic cells are compartmentalized  They contain small structures called organelles  Perform specific functions  Isolates reactions from others  Two classes of organelles:  Endomembrane system:  Organelles that communicate with one another  Via membrane channels  Via small vesicles  Energy related organelles  Mitochondria & chloroplasts  Basically independent & self-sufficient
  • 26. Cytosole  Cytosol, contains many long, fine filaments of protein that are responsible for cell shape and structure and thereby form the cell’s cytoskeleton 26
  • 27. 27 Nucleus  Command center of cell, usually near center  Separated from cytoplasm by nuclear envelope  Consists of double layer of membrane  Nuclear pores permit exchange between nucleoplasm & cytoplasm  Contains chromatin in semifluid nucleoplasm  Chromatin contains DNA of genes, and proteins (Histones)  Condenses to form chromosomes  Chromosomes are formed during cell division  Nucleolus is a dense structure in the nucleus  Synthesize ribosome RNA (rRNA)
  • 28. 28 Anatomy of the Nucleus
  • 29. 29 Ribosomes  Are the site of protein synthesis in the cell  Composed of rRNA and protein  Consists of a large subunit and a small subunit  Subunits made in nucleolus  May be located:  On the endoplasmic reticulum (thereby making it “rough”), or  Free in the cytoplasm
  • 31. 31 Endomembrane System  Series of intracellular membranes that compartmentalize the cell  Restrict enzymatic reactions to specific compartments within cell  Consists of:  Nuclear envelope  Membranes of endoplasmic reticulum  Golgi apparatus  Vesicles  Several types  Transport materials between organelles of system
  • 32. 32 Endomembrane System: The Endoplasmic Reticulum  A system of membrane channels and saccules (flattened vesicles) continuous with the outer membrane of the nuclear envelope  Rough ER  Studded with ribosomes on cytoplasmic side  Protein anabolism  Synthesizes proteins  Modifies and processes proteins  Adds sugar to protein  Results in glycoproteins  Smooth ER  No ribosomes  Synthesis of lipids  Site of various synthetic processes, detoxification, and storage  Forms transport vesicles
  • 34. 34 Endomembrane System: The Golgi Apparatus  Golgi Apparatus  Consists of flattened, curved saccules  Resembles stack of hollow pancakes  Modifies proteins and lipids  Receives vesicles from ER on cis (or inner face)  Modifies them and repackages them in vesicles  Release the vesicles from trans (or outer face)  Within cell  Export from cell (secretion, exocytosis)
  • 36. 36 Endomembrane System: Lysosomes  Membrane-bound vesicles (not in plants)  Produced by the Golgi apparatus  Contain powerful digestive enzymes and are highly acidic  Digestion of large molecules  Recycling of cellular debris and resources  Autolysis may occur in injured or dying cell to cause apoptosis (programmed cell death, like tadpole losing tail)
  • 38. 38 Endomembrane System: Summary  Proteins produced in rough ER and lipids from smooth ER are carried in vesicles to the Golgi apparatus.  The Golgi apparatus modifies these products and then sorts and packages them into vesicles that go to various cell destinations.  Secretory vesicles carry products to the membrane where exocytosis produces secretions.  Lysosomes fuse with incoming vesicles and digest macromolecules.
  • 39. 39 Endomembrane System: A Visual Summary
  • 40. 40 Peroxisomes  Similar to lysosomes  Membrane-bounded vesicles  Enclose enzymes that rid the cell of toxic peroxides  Participate in the metabolism of fatty acids and many other metabolites
  • 42. 42 Vacuoles  Membranous sacs that are larger than vesicles  Store materials that occur in excess  Others very specialized (contractile vacuole)  Plants cells typically have a central vacuole  Up to 90% volume of some cells  Functions in:  Storage of water, nutrients, pigments, and waste products  Development of turgor pressure  Some functions performed by lysosomes in other eukaryotes
  • 44. 44 Energy-Related Organelles: Chloroplast Structure  Bounded by double membrane  Inner membrane infolded  Forms disc-like thylakoids, which are stacked to form grana  Suspended in semi-fluid stroma  Chlorophyll  Green photosynthetic pigment  Chlorophyll capture solar energy
  • 45. 45 Energy-Related Organelles: Chloroplasts  Serve as the site of photosynthesis  Captures light energy to drive cellular machinery  Photosynthesis  Synthesizes carbohydrates from CO2 & H2O  Makes own food using CO2 as only carbon source  Inorganic molecules (Energy-poor compounds) are converted to organic molecules (energy-rich compounds)  Only plants, algae, and certain bacteria are capable of conducting photosynthesis
  • 47. 47 Energy-Related Organelles: Mitochondria  Smaller than chloroplast  Contain ribosomes and their own DNA  Surrounded by a double membrane  Inner membrane surrounds the matrix and is convoluted (folds) to form cristae.  Matrix – Inner semifluid containing respiratory enzymes  Break down carbohydrates  Involved in cellular respiration  Produce most of ATP utilized by the cell  Contain their own DNA and ribosome i.e. they are semiautonomous  Inherited from Oocyte
  • 50. 50 The Cytoskeleton  Maintains cell shape  Assists in movement of cell and organelles  Aids movement of materials in and out of cells  Three types of macromolecular fibers  Microfilament  Intermediate Filaments  Microtubules  Assemble and disassemble as needed
  • 51. 51 The Cytoskeleton: Actin Filaments  Microfilament are rods of actin  Extremely thin filaments like twisted pearl necklace  Support for microvilli in intestinal cells  Intracellular traffic control  For moving stuff around within cell  Cytoplasmic streaming  Function in pseudopods of amoeboid cells  Important component in muscle contraction
  • 52. 52 The Cytoskeleton: Actin Filament Operation
  • 53. 53 The Cytoskeleton: Intermediate Filaments  Intermediate in size between actin filaments and microtubules  Rope-like assembly of fibrous polypeptides  Functions:  Support nuclear envelope  Cell-cell junctions, like those holding skin cells tightly together
  • 54. 54 The Cytoskeleton: Microtubules  Hollow cylinders made of two globular proteins called a and b tubulin  Spontaneous pairing of a and b tubulin molecules form structures called dimers  Dimers then arrange themselves into tubular spirals of 13 dimers around  Assembly:  Under control of Microtubule Organizing Center (MTOC)  Most important MTOC is centrosome  Function:  Provide framework for movement of organelle within cell  Direct separation of chromosomes during cell division (e.g. Centrioles are composed of microtubules)  Provide locomotion and movement (e.g. flagella and cilia)
  • 57. 57 Microtubular Arrays: Centrioles  Short, hollow cylinders  One pair per animal cell  Located in centrosome of animal cells  Oriented at right angles to each other  Separate during mitosis to determine plane of division
  • 59. 59 Microtubular Arrays: Cilia and Flagella  Hair-like projections from cell surface that aid in cell movement  In eukaryotes, cilia are much shorter than flagella  Cilia move in coordinated waves like oars  Flagella move like a propeller or cork screw
  • 60. 60 Structure of a Flagellum
  • 61. 61 Comparison of Prokaryotic and Eukaryotic Cells
  • 62. 62

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