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BREEDING RICE FOR DROUGHT
TOLERANCE
B.MOHANAPRIYA
2017600808
A green revolution
to
gene revolution
Drought - complex trait
CLASSIFICATION OF DROUGHT
Early drought Intermittent drought
Terminal drought
Severity Index (source: Aigup Dai, Wiley interdisciplinary Reviews: Climate Change; july 2012)
Conventional
breeding approach
DTY Qtls
• IRRI developed 50 mapping population.
• 14 QTLs, in which a single QTL explained 9-39% of
the phenotypic variation.
• These QTLs distributed on eight chromosomes.
qDTY12.1 a large effect qtl
• qDTY12.1 works as a gene-complex of 10
genes
• transcription factor OsNAM is a major
regulator.
candidate gene analysis has been carried out in this QTL region and several genes have been
reported as putative candidate genes, including a GRAM-domain containing protein, an
Amydohydrolase, a Nodulin MtN3, a No Apical Meristem, a Cellulose Synthase A
(CesA10) and a cytochrome P450 associated with different processes such as root hair
proliferation/elongation, pollen fertility, cell wall permeability and signal transduction
Pleiotropy vs Linkage
qDTY1.1, qDTY2.2, qDTY3.1, qDTY3.2, qDTY6.1, and qDTY12.1
showed an effect against two or more high-yielding genetic
backgrounds in both the lowland and upland ecosystem, indicating
their usefulness in increasing the grain yield of rice under drought
Secondary traits
REFERENCES
• K.S. Fischer, R. Lafitte, S. Fukai,G. Atlin, and B. Hardy , Breeding Rice for
Drought-Prone Environments ,IRRI,2003
• Nitika Sandhu and Arvind Kumar , Bridging the Rice Yield Gaps under Drought:
QTLs,Genes, and Their Use in Breeding Programs ,MDPI.2017.
• Vikram et al, qDTY1.1, a major QTL for rice grain yield under reproductive-
stage drought stress with a consistent effect in multiple elite genetic
backgrounds. BMC Genetics 2011, 12:89
• Mishra et al, qDTY12.1: a locus with a consistent effect on grain yield under
drought in rice. BMC Genetics 2013, 14:12
Thank you

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Breeding rice for drought

  • 1. BREEDING RICE FOR DROUGHT TOLERANCE B.MOHANAPRIYA 2017600808 A green revolution to gene revolution
  • 2.
  • 5. Early drought Intermittent drought Terminal drought
  • 6. Severity Index (source: Aigup Dai, Wiley interdisciplinary Reviews: Climate Change; july 2012)
  • 7.
  • 8.
  • 9.
  • 11.
  • 12.
  • 13. DTY Qtls • IRRI developed 50 mapping population. • 14 QTLs, in which a single QTL explained 9-39% of the phenotypic variation. • These QTLs distributed on eight chromosomes.
  • 14.
  • 15. qDTY12.1 a large effect qtl • qDTY12.1 works as a gene-complex of 10 genes • transcription factor OsNAM is a major regulator.
  • 16. candidate gene analysis has been carried out in this QTL region and several genes have been reported as putative candidate genes, including a GRAM-domain containing protein, an Amydohydrolase, a Nodulin MtN3, a No Apical Meristem, a Cellulose Synthase A (CesA10) and a cytochrome P450 associated with different processes such as root hair proliferation/elongation, pollen fertility, cell wall permeability and signal transduction
  • 17.
  • 19.
  • 20.
  • 21. qDTY1.1, qDTY2.2, qDTY3.1, qDTY3.2, qDTY6.1, and qDTY12.1 showed an effect against two or more high-yielding genetic backgrounds in both the lowland and upland ecosystem, indicating their usefulness in increasing the grain yield of rice under drought
  • 23.
  • 24.
  • 25. REFERENCES • K.S. Fischer, R. Lafitte, S. Fukai,G. Atlin, and B. Hardy , Breeding Rice for Drought-Prone Environments ,IRRI,2003 • Nitika Sandhu and Arvind Kumar , Bridging the Rice Yield Gaps under Drought: QTLs,Genes, and Their Use in Breeding Programs ,MDPI.2017. • Vikram et al, qDTY1.1, a major QTL for rice grain yield under reproductive- stage drought stress with a consistent effect in multiple elite genetic backgrounds. BMC Genetics 2011, 12:89 • Mishra et al, qDTY12.1: a locus with a consistent effect on grain yield under drought in rice. BMC Genetics 2013, 14:12