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The Present and Future
3D World
In and Around
D-Flow Flexible Mesh (D-Flow FM)
Rob Uittenbogaard & Herman Kernkamp
(Deltares Software Centre)
With Help from Numerous Colleagues
Delft Software Days - Keynote - Tuesday Nov 3 - 2015
2
Deltares Domains Covered by NGHS (excluding Meteorology)
Meteorology
October 12, 2010
D-Flow FM - 1Dh & 2Dh & 3D – Flexibility in Grid Size and Shapes
Shapespentagons+…
Courtesy Mick van der Wegen a.o.
October 12, 2010
D-Flow FM - 1Dh & 2Dh & 3D – Flexibility in Grid Size and Shapes
Courtesy Martin Verlaan
5
Computational Effort
Resolved Domains with 24h CPU
2Dh Depth-Averaged
3D Shallow-Flow Solver
Salt & Temp & Turb.
3D Large Eddy Simulation
3D Direct Numerical
Simulation
6
Computational Effort
Resolved Domains with 24h CPU
2Dh Depth-Averaged
3D Shallow-Flow Solver
Salt & Temp & Turb.
3D Direct Numerical
Simulation
3D Large Eddy Simulation
CORMIX
WANDA-Locks
Bubble Plume Models
CFD (e.g. Turbines)
NGHS Wish List – Page 1
1D and 2D parallel
3D description of plant structure
3D parallel
Built in grid aggregation
Carbon storage Delft3D-WAQ
Coupling to MPM
Coupling with existing models e.g. inVEST (CSIRO)
Coupling with higher trophic levels
Coupling with morphology on different time scales
! Coupling with near-field models !
NGHS Wish List – Page 2
Creep and geochemistry
Data assimilation for calibration
! Fluid mud !
Feedback of vegetation dynamics to flow and sediment
transport
Flexible number of layers and mix between z and sigma
layering
Flexible timestep for optimal use of FM
! Easy coupling to global ocean models (e.g. NEMO, HYCOM) !
GUI for Delwaq-G
Heat flux modelling - excess
! Heat flux modelling - Composite Heat Flux !
Implementation of bubble screens
Interactive runs - pause/modify/resume
! Internal waves !
Kalman filtering
Larvae modelling
Merger of Delft3D-WAQ and PART
! Modelling waves in 3D !
Moving observation points
NGHS Wish List – Page 3
Multiple density formulations
Non hydrostatic modelling
Non-newtonian sediment transport (Slib3D)
Online WAQ coupling
Parallelisation
Particle tracking
Partitioned output in time
Point sources and sink
Sand-mud bed module
NGHS Wish List – Page 4
Sediment modelling
Sediment transport and bed updating
! Solar radiation !
! Space and time-varying forcing for temp/humidity/cloudiness !
Sub grid bathymetry functionality (3Di project)
Tangential boundary conditions
! Time-varying meteorological input !
Trachytopes
Variable time step
NGHS Wish List – Page 5
Vegetation roughness modelling
Vegetation roughness via Baptist formula
Vertical mixing due to bubble screens
Water quality coupling with waves
Write output at specific times
Write output only after pre-defined spin up
! Z-layers !
NGHS Wish List – Page 6
1 januari 2008
NGHS Planning Oct – Dec 2015
2Dh issues & 3D Morphology and Surface Waves Coupling (SWAN)
Research on Wave-Current Interaction
14
Mud flow
critical flow
energy head
weirs
vertical mixing
heat fluxes
stratification
internal waves
Earth rotation
flood waves
bed friction
long waves
Earth rotation - tidal waves
gravity currents – stratification
turbulence - shear
dispersion - coastal jets
large-eddy simulation
non-hydrostatic pressure
Day 1 Day 1Day 2 Day 3
Physical Processes – per course day
Gravity
Mission Achieved
Dam-Break & Flooding - Invariance for Horizontal Grid Size & Shape
Research in Progress
Mud & Debris & Glacier-Ice Flows (Rheology)
  
 
   
 
n
yield
U
z
0 

 

yield
U
z
vapour flux w q 
Mission Achieved
Evaporation of Lakes and Reservoirs
Matthias Roth (NUS, 2009) – Bedok Reservoir
Lake Nasser - Surface Area: 6,900 km²
5.6 mm/day - 444 m³/s - 14 Gm³/year
Mission Achieved
Implemented in Delft3D-FLOW and D-Flow FM
Bedok Reservoir (Singapore)
Credit : Holzner et
al. 2012
-Aeration system (since 1985)
Winter : aeration by bubble
plume
Summer : oxygen supply
Lake Hallwil – Characteristics and Aeration System
-Eutrophic lake on the Swiss Plateau
-Max depth ~ 46 m
- Cyanobacteria : Planktothrix rubescens dominant
species from March to October
- Monthly survey of the lake
Research in Progress
Internal Seiches by 1DV model – Modal Analysis
2
0
 


 

g
N
z
2
2
ˆ
ˆ( ,c) 0 
d w
Q z w
d z
 
 
2 2
2
2 2
1
,   

N d U
Q z c k
U c d zU c
11-11-2015
Future Validation
Internal Seiches by 1DV model
Mission Achieved
River Flow – Conveyance – Invariant for Grid Resolution
q ? [m2 s-1]


d
x
g
Given:
• Bed Roughness
• Water Depth
• Bed Slope
Invariance for Horizontal
Grid Size & Shape
Invariance for Vertical Size
Ongoing Research
Transformation of k-ε Turbulence Model – Other Bed Boundary Cond.
*
0
n
2
l 1


 
 
 
bed
bed
U
u
z
z
*
0
ln 1


 
 
 
bed
bed
ze
U
u
z
Delft3D-FLOW Layer Centered
D-Flow FM Layer Integrated
2


T
k
c
 T c k
Turbulence Model
Turbulence Modelk
k


k
For Details: M.Sc. Thesis Yoeri Dijkstra
Ongoing Research
Convergence Test and u* (dz/2) & u* (dz/e)
0.9
0.95
1
1.05
1.1
1 2 3 4 5 6 7 8 9 10 11
k-eps (dz/2)
k_tau (dz/2)
k-eps (dz/e)
k-tau (dz/e)
2 4 8 16 32 64 128 256 512 1024
&  k k
Number Vertical Layers
simulated
theory
q
q
Water Surface: *
0


 

U u
z H
Deltares Market
Estuaries - Rotterdam Waterway
1
2
5
3
6
4
7,8,9
10
11
1213
15
14
Research in Progress
High Demands on Grid Resolution and Density Stratification
Research in Progress
Results Depend Too Strong on Sigma or Z-layer Grids…
Past Research – Code Validation
Internal Waves Generated by Bed Topography & Critical Layer Formation
Flux of
Internal Wave Energy
Conversion into
Turbulent Kinetic Energy
Pietrzak, Kranenburg & Abraham (Nature, 1990)
Koop & McGee (1986)
Past Research
Internal Waves and Small-Scale Mixing in Rotterdam Waterway
SCAMP
Microstructure
Profiler
100m 10m 1m
Displacement Scale [m]
Uittenbogaard & Imberger (1992)
Research & Deltares Market
Salt-Intrusion and Loss of Freshwater through Shipping Locks
14m Wide
148m Long
4.7m Deep
Lock DoorsAir-Bubble Screen Slots
Partially Achieved - Research in Progress
Coupling to Near-Field Models CORMIX – WANDA Locks
11 november 2015
WANDA-Locks
Sobek
H–given
Cl-given
Qdischarge, Sobek
H–given
Cl-given
Lock Salt Flux
kg/s Cl,Wanda
Qdischarge, Sobek
HSobek
[Cl]Sobek
CORMIX or CFD
Ocean Applications – Deep-Sea Mining
HYCOM → Delft3D-FLOW z-layers ↔ Delft3D-FLOW σ-levels
HYCOM Internal Tides
Z-layers (Delft3D-FLOW)
σ-levels (Delft3D-FLOW)
Ocean Applications
Sources of Internal Wave Energy (Thorpe, 1980)
Simulated by HYCOM..?
Internal Waves At Equatorial Undercurrent central Pacific
Griffiths & Linden (1981)
Ocean Applications
Radial Lock Exchange in Rotating System
Simulated by D-Flow FM

Rotating (Ω) Salt Water
Co-Rotating Freshwater
1 2
43
October 12, 2010
D-Flow Flexible Mesh Join Our Research & Development !!
Courtesy Martin Verlaan
Warranty: a priori not all examples will be implemented or validated
On what subjects would you like to collaborate with us?

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DSD-INT 2015 - The present and future 3D world in and around D-Flow FM - Rob Uittenbogaard, Deltares

  • 1. The Present and Future 3D World In and Around D-Flow Flexible Mesh (D-Flow FM) Rob Uittenbogaard & Herman Kernkamp (Deltares Software Centre) With Help from Numerous Colleagues Delft Software Days - Keynote - Tuesday Nov 3 - 2015
  • 2. 2 Deltares Domains Covered by NGHS (excluding Meteorology) Meteorology
  • 3. October 12, 2010 D-Flow FM - 1Dh & 2Dh & 3D – Flexibility in Grid Size and Shapes Shapespentagons+… Courtesy Mick van der Wegen a.o.
  • 4. October 12, 2010 D-Flow FM - 1Dh & 2Dh & 3D – Flexibility in Grid Size and Shapes Courtesy Martin Verlaan
  • 5. 5 Computational Effort Resolved Domains with 24h CPU 2Dh Depth-Averaged 3D Shallow-Flow Solver Salt & Temp & Turb. 3D Large Eddy Simulation 3D Direct Numerical Simulation
  • 6. 6 Computational Effort Resolved Domains with 24h CPU 2Dh Depth-Averaged 3D Shallow-Flow Solver Salt & Temp & Turb. 3D Direct Numerical Simulation 3D Large Eddy Simulation CORMIX WANDA-Locks Bubble Plume Models CFD (e.g. Turbines)
  • 7. NGHS Wish List – Page 1 1D and 2D parallel 3D description of plant structure 3D parallel Built in grid aggregation Carbon storage Delft3D-WAQ Coupling to MPM Coupling with existing models e.g. inVEST (CSIRO) Coupling with higher trophic levels Coupling with morphology on different time scales ! Coupling with near-field models !
  • 8. NGHS Wish List – Page 2 Creep and geochemistry Data assimilation for calibration ! Fluid mud ! Feedback of vegetation dynamics to flow and sediment transport Flexible number of layers and mix between z and sigma layering Flexible timestep for optimal use of FM ! Easy coupling to global ocean models (e.g. NEMO, HYCOM) ! GUI for Delwaq-G Heat flux modelling - excess
  • 9. ! Heat flux modelling - Composite Heat Flux ! Implementation of bubble screens Interactive runs - pause/modify/resume ! Internal waves ! Kalman filtering Larvae modelling Merger of Delft3D-WAQ and PART ! Modelling waves in 3D ! Moving observation points NGHS Wish List – Page 3
  • 10. Multiple density formulations Non hydrostatic modelling Non-newtonian sediment transport (Slib3D) Online WAQ coupling Parallelisation Particle tracking Partitioned output in time Point sources and sink Sand-mud bed module NGHS Wish List – Page 4
  • 11. Sediment modelling Sediment transport and bed updating ! Solar radiation ! ! Space and time-varying forcing for temp/humidity/cloudiness ! Sub grid bathymetry functionality (3Di project) Tangential boundary conditions ! Time-varying meteorological input ! Trachytopes Variable time step NGHS Wish List – Page 5
  • 12. Vegetation roughness modelling Vegetation roughness via Baptist formula Vertical mixing due to bubble screens Water quality coupling with waves Write output at specific times Write output only after pre-defined spin up ! Z-layers ! NGHS Wish List – Page 6
  • 13. 1 januari 2008 NGHS Planning Oct – Dec 2015 2Dh issues & 3D Morphology and Surface Waves Coupling (SWAN) Research on Wave-Current Interaction
  • 14. 14 Mud flow critical flow energy head weirs vertical mixing heat fluxes stratification internal waves Earth rotation flood waves bed friction long waves Earth rotation - tidal waves gravity currents – stratification turbulence - shear dispersion - coastal jets large-eddy simulation non-hydrostatic pressure Day 1 Day 1Day 2 Day 3 Physical Processes – per course day Gravity
  • 15. Mission Achieved Dam-Break & Flooding - Invariance for Horizontal Grid Size & Shape
  • 16. Research in Progress Mud & Debris & Glacier-Ice Flows (Rheology)            n yield U z 0      yield U z
  • 17. vapour flux w q  Mission Achieved Evaporation of Lakes and Reservoirs Matthias Roth (NUS, 2009) – Bedok Reservoir Lake Nasser - Surface Area: 6,900 km² 5.6 mm/day - 444 m³/s - 14 Gm³/year
  • 18. Mission Achieved Implemented in Delft3D-FLOW and D-Flow FM Bedok Reservoir (Singapore)
  • 19. Credit : Holzner et al. 2012 -Aeration system (since 1985) Winter : aeration by bubble plume Summer : oxygen supply Lake Hallwil – Characteristics and Aeration System -Eutrophic lake on the Swiss Plateau -Max depth ~ 46 m - Cyanobacteria : Planktothrix rubescens dominant species from March to October - Monthly survey of the lake
  • 20. Research in Progress Internal Seiches by 1DV model – Modal Analysis 2 0        g N z 2 2 ˆ ˆ( ,c) 0  d w Q z w d z     2 2 2 2 2 1 ,     N d U Q z c k U c d zU c
  • 22. Mission Achieved River Flow – Conveyance – Invariant for Grid Resolution q ? [m2 s-1]   d x g Given: • Bed Roughness • Water Depth • Bed Slope Invariance for Horizontal Grid Size & Shape Invariance for Vertical Size
  • 23. Ongoing Research Transformation of k-ε Turbulence Model – Other Bed Boundary Cond. * 0 n 2 l 1         bed bed U u z z * 0 ln 1         bed bed ze U u z Delft3D-FLOW Layer Centered D-Flow FM Layer Integrated 2   T k c  T c k Turbulence Model Turbulence Modelk k   k For Details: M.Sc. Thesis Yoeri Dijkstra
  • 24. Ongoing Research Convergence Test and u* (dz/2) & u* (dz/e) 0.9 0.95 1 1.05 1.1 1 2 3 4 5 6 7 8 9 10 11 k-eps (dz/2) k_tau (dz/2) k-eps (dz/e) k-tau (dz/e) 2 4 8 16 32 64 128 256 512 1024 &  k k Number Vertical Layers simulated theory q q Water Surface: * 0      U u z H
  • 25. Deltares Market Estuaries - Rotterdam Waterway
  • 26. 1 2 5 3 6 4 7,8,9 10 11 1213 15 14 Research in Progress High Demands on Grid Resolution and Density Stratification
  • 27. Research in Progress Results Depend Too Strong on Sigma or Z-layer Grids…
  • 28. Past Research – Code Validation Internal Waves Generated by Bed Topography & Critical Layer Formation Flux of Internal Wave Energy Conversion into Turbulent Kinetic Energy Pietrzak, Kranenburg & Abraham (Nature, 1990) Koop & McGee (1986)
  • 29. Past Research Internal Waves and Small-Scale Mixing in Rotterdam Waterway SCAMP Microstructure Profiler 100m 10m 1m Displacement Scale [m] Uittenbogaard & Imberger (1992)
  • 30. Research & Deltares Market Salt-Intrusion and Loss of Freshwater through Shipping Locks 14m Wide 148m Long 4.7m Deep Lock DoorsAir-Bubble Screen Slots
  • 31. Partially Achieved - Research in Progress Coupling to Near-Field Models CORMIX – WANDA Locks 11 november 2015 WANDA-Locks Sobek H–given Cl-given Qdischarge, Sobek H–given Cl-given Lock Salt Flux kg/s Cl,Wanda Qdischarge, Sobek HSobek [Cl]Sobek CORMIX or CFD
  • 32. Ocean Applications – Deep-Sea Mining HYCOM → Delft3D-FLOW z-layers ↔ Delft3D-FLOW σ-levels HYCOM Internal Tides Z-layers (Delft3D-FLOW) σ-levels (Delft3D-FLOW)
  • 33. Ocean Applications Sources of Internal Wave Energy (Thorpe, 1980) Simulated by HYCOM..?
  • 34. Internal Waves At Equatorial Undercurrent central Pacific
  • 35. Griffiths & Linden (1981) Ocean Applications Radial Lock Exchange in Rotating System Simulated by D-Flow FM  Rotating (Ω) Salt Water Co-Rotating Freshwater 1 2 43
  • 36. October 12, 2010 D-Flow Flexible Mesh Join Our Research & Development !! Courtesy Martin Verlaan
  • 37. Warranty: a priori not all examples will be implemented or validated On what subjects would you like to collaborate with us?