1. On the modeling of the surface area that actually
contributes to the current density produced in
microbial electrochemical systems
Alessandro Carmona1, Rémy Lacroix2, Serge Da Silva2,
Eric Trably1 and Nicolas Bernet1
1INRA, Laboratoire de Biotechnologie de l’Environnement, Narbonne, France,
alessandro.carmona@supagro.inra.fr; 26T-MIC Ingénieries, Toulouse, France
3. Overall view of bioelectrochemical systems
Configuration of a BES: membrane specificity, type of catalysts at both electrodes, and the
source of the reducing power
Harnisch, F. et al., ChemSusChem. 2009; Franks, A.E. et al., Biofuels. 2010; Logan, B.E. et al., Environ. Sci. Technol. 2008
or or
Anode
Power supply
Renewable energy
Cathode
C+
A-e-
e-
Catalysts at the Anode
Microbially
catalysed
CO2
O2
H2O
H+
Membrane specificity
Rabaey, K. et al, Nat. Rev. Micro. 2010. 8(10): p. 706-716
Catalysts at the Cathode
Product
„electrochemical device that exploits living
Product
microbial cells for the bioelectrocatalysis of anodic-oxidation
and/or cathodic-reduction reactions“
Harnisch F. et al. Chem. Asian J. 2012, 7, 466 – 475
e-
Organics
Chemially
or catalysed
H2
e-
Electron
acceptor
Microbially
catalysed
Chemially
catalysed
or
Electron
acceptor
C+
A-A-C+
C+
A-or
or
cation anion no membrane
exchange membrane
Power production
Short circuit
e- e-e-e-
e-e-
e-
Reducing power
4. Experimental approach in METS
Operational parameters
Electrochemistry
CA, CV, EIS…
Reactor design
Microscopy
Fingerprinting SEM, CLSM..
16S rRNA
Harnisch and Rabaey, ChemSusChem. 2012
pH
T°
OLR
CE%
HRT
5. Electrodes in bioelectrochemical systems
Carbon paper Graphite plate Carbon mesh Granular graphite
Polycrystalline
Carbon rod Carbon brush Carbon felt Reticulated
vitrified carbon
graphite
Photographs taken from: Wei J. et al. Bioresour. Technol. 2011. 102: p. 9335–9344
6. Current density in microbial BESs
Modified from:
Schröder, U., J. Solid State Electrochem. 2011
Chen, S. et al., Energy Environ Sci. 2012
Chen, S. et al., Energy Environ Sci. 2011
Zhao, Y. et al., Chem. Eur. J. 2010,
7. What surface should be used to calculate current? in BESs!!!
“Flat stainless steel has produced up to 20 A/m2…” “these data must be qualified
because the 2 sides of the electrode were exposed to the (medium) solution
while the current density was calculated with respect to 1 side only”
Rimboud, M., Physical Chemistry Chemical Physics. 2014
e- e-
e- e-
“An example of poor design would be a cell with a plate working electrode with
both sides active and a counter electrode facing only one surface”
Drawn from: Pletcher, D., Royal society of chemistry. 2009
Potential distribution in mV at the
surface of a ring-shaped WE using an
120
mV
“The varying iR drops along the different current paths produce a nonuniform potential across the
WE’s surface, and as a consequence there is a nonuniform current density on the WE’s surface.
These effects can cause undesired side reactions or ineffective use of the total electrode area”
Drawn from: Bard, A., Wiley. 2001
WE
CE
125
33
25
75 45
85
63
95
113
unsymetrical CE
Insulated
Insulated
mV
mV
Anode
Cathode
Reference electrode
e.g., vs. Ag/AgCl
8. Experimental approach
Cronoamperometry Cyclic voltammetry CLSM COMSOL*
current production distribution, electron transfer and biofilm formation/structure
“COMSOL Multiphysics is an engineering simulation software that facilitates all steps of a computational modeling
process; such as defining the geometry, surface meshing, specifying the physics, solving, and then visualizing the results”
Dalak, E., M.Sc. Thesis. 2012
Do both sides of a planar electrode material
contribute to electron transfer?
10. Anode-respiring bacterium model
Nanowire?
NADH
NAD+
NAD+
2CO2
Geoalkalibacter subterraneus
Electrons
8H+
Electrode
Cytochrome pool?
e-
8 e-
2H2O
CH3COOH
turnover
Ef
-365 mV
Geoalkalibacter cell (5-6 μm)
0.0
-0.5
-1.0
Potential vs. SCE (V) at pH 7
non
turnover
Ef
-428 mV
CLSM confirmed a thick biofilm composed
of several layers of metabolically active
bacteria all over the electrode
Electrons
e-
Conductive filaments?
Electrode
Single bacterial cells
Biofilm thickness :76 μm
Cyclic voltammetry indicates an direct
electron transfer mechanism via a conduit
with a defined formal potential window
Geoalkalibacter
subterraneus
Biofilm on
both sides
11. SCE as RE
Temperature controlled system at 37°C
Continuos stirring at 200 rpm
Experimental conditions
Data based on at least 2 independent biofilm replicates
B. E. Logan, ChemSusChem, 2012, 5, 988-994
RE
CE
WE1 WE2
Insulator
Insulator
Active→│←Inactive Active→│←Inactive
DSMZ
culture
48 h 3000
Liquid
culture
rpm
Half
cell
Graphite plate as
Working electrode
Pt grid as Counter electrode
WE1
WE2
Top
view
Non conductive
Non conductive
Biofilm
Biofilm
Potentiostatic controlled half-cell:
-Similar biological-environmental conditions for both
electrodes
-High reproducibility by maintaining one of the
electrodes at a constant potential vs. reference electrode
LaBelle,E. et al. Bioelectrochemical Systems. 2010
13. Chronoamperometric formation of Geoalkalibacter biofilms
WE1 WE2
Biofilm on both electrodes
RE
CE
WE1 WE2
Insulator
Insulator
Non conductive
Non conductive
Biofilm
Biofilm
Active→│←Inactive Active→│←Inactive
14. Turnover cyclic voltammetry
Independent replicate
Exp. at 5.00 S/m
Exp. at 1.00 S/m
jmax
decreases
jmax
Ef: -470 mv
15. Biofilm imaging
using CLSM,
PHLIP
analysis…
Franks, A. et al. ChemSusChem (2012)
…and COMSOL
WE2
Thickness: 75 μm (± 7)
Current: 2.60 A/m2
(± 0.01)
WE1
Thickness: 71 μm (± 12)
Current: 2.57 A/m2
(± 0.07)
3
2
1
0
3
2
1
0
j/ A m-2 j/ A m-2
Active→│←Inactive
CE
Active→│←Inactive
WE1 WE2
current distribution by COMSOL
16. Conclusion
Cronoamperometry Cyclic voltammetry CLSM COMSOL
current production distribution, electron transfer and biofilm formation/structure
WE j / A m-2 Ef/ mV Thickness/ μm j distribution
1 2.6 -475 71 uniform
2 2.5 -476 75 uniform
Both sides of a planar electrode material do contribute to
current production regardless the electrode side orientation
In BESs, a plenitude of possible applications can be found (Fig. 1-6), from the original and promising production of electricity (Logan, et al., 2006), to hydrogen as a clean fuel (Logan, et al., 2008) and the production of useful chemicals (Rabaey and Rozendal, 2010) such as hydrogen peroxide, extraordinarily from wastewater (Fu, et al., 2010, You , et al., 2010). Nonetheless, the cited applications in this section would not be possible without the basic research on the microbe-electrode interactions which inexorably turn out to contribute to the betterment of the overall performance of this kind of systems by eliminating (or at least diminishing) electrochemical losses of BESs (Schröder and Harnisch, 2010). Therefore, the analysis of the microbe-electrode interactions would lead not only to a higher comprehension on improving the overall performance of BESs (see section 1.5) from the power production point of view but also on improving a more precise electron uptake by microorganisms for the production of useful and industrial demanded biochemicals (Nevin, et al., 2010, Ross, et al., 2011).
As shown in Fig. 1-6, microbial-electrode interactions can take place in both electrode chambers depending on the application for which the BES has been designed. A simplified version of a BES system as shown in the insert of Fig. 1-6 is a potentiostatic controlled electrochemical half-cell in which an anode and a cathode are hosted within one vessel (LaBelle, et al., 2010). This experimental approach assures similar biological and environmental conditions for both electrodes and increases the reproducibility of the experiment by maintaining one of the electrodes at a constant potential permanently controlled against a reference electrode (e.g., vs. Ag/AgCl) (Bard, et al., 2008). This type of BES (with multiple modifications) is the one that has been extensively used in this Thesis.
Sad bacteria: http://www.clipartof.com/gallery/clipart/germ.html
As one can see from the literature (Schröder, 2011), one of the motivations for the development of the BES technology has been a competitive “race” to increase the current production and trying to make this technology an affordable option for the treatment of wastewater with the concomitant consequence production of sustainable electricity and biochemicals (Rabaey and Rozendal, 2010).
Here, the understanding of microbial-electrode interactions has been part of the global effort to accomplish BESs with an enhanced performance. Current density based on available anode surface area has made a noticeable development (Fig 1-7). Since 1999, the experimental biotransformation of substrate (fuel) to electric energy (Schröder, 2007) has been performed with the utilization of dissimilatory metal reducing bacteria (e.g., from the Shewanellaceae family (Kim, et al., 1999b, Kim, et al., 1999d)). The performance of the current density production has seen a considerable increment from only 0.013 μA cm-2 (Kim, et al., 1999d) to more than 30 A m-2 (see Chapter 5 and 6).
The betterment of performance of BESs based on the current density is (among other factors) due to: i. the fabrication of porous three dimensional materials that allow bacteria to take advantage of higher electrode surface areas to release electrons (Katuri, et al., 2011, Šefčovičová, et al., 2011, Xie, et al., 2011, Yu, et al., 2011) (see Chapter 5 and 6); ii. the comprehension of how electrochemically active bacteria associate with some electrode materials through improved anode enrichment processes (Kim, et al., 2004, Liu, et al., 2008, Rabaey, et al., 2004); and iii. through the study of the process of biofilm formation influenced by environmental factors (see Chapter 7 and 8).
As one can see from the literature (Schröder, 2011), one of the motivations for the development of the BES technology has been a competitive “race” to increase the current production and trying to make this technology an affordable option for the treatment of wastewater with the concomitant consequence production of sustainable electricity and biochemicals (Rabaey and Rozendal, 2010).
Here, the understanding of microbial-electrode interactions has been part of the global effort to accomplish BESs with an enhanced performance. Current density based on available anode surface area has made a noticeable development (Fig 1-7). Since 1999, the experimental biotransformation of substrate (fuel) to electric energy (Schröder, 2007) has been performed with the utilization of dissimilatory metal reducing bacteria (e.g., from the Shewanellaceae family (Kim, et al., 1999b, Kim, et al., 1999d)). The performance of the current density production has seen a considerable increment from only 0.013 μA cm-2 (Kim, et al., 1999d) to more than 30 A m-2 (see Chapter 5 and 6).
The betterment of performance of BESs based on the current density is (among other factors) due to: i. the fabrication of porous three dimensional materials that allow bacteria to take advantage of higher electrode surface areas to release electrons (Katuri, et al., 2011, Šefčovičová, et al., 2011, Xie, et al., 2011, Yu, et al., 2011) (see Chapter 5 and 6); ii. the comprehension of how electrochemically active bacteria associate with some electrode materials through improved anode enrichment processes (Kim, et al., 2004, Liu, et al., 2008, Rabaey, et al., 2004); and iii. through the study of the process of biofilm formation influenced by environmental factors (see Chapter 7 and 8).
Sad bacteria: http://www.clipartof.com/gallery/clipart/germ.html
How can we go from the concept of a normal microorganism to a so called Electrochemically active bacteria?
-In the environment electrochemically active bacteria (EAB) can transfer electrons to solid terminal electron acceptors such as Fe(III), Mn(III) or Cr(VI).
-In a Bioelectrochemical system such as microbial fuel cells (MFCs) these bacteria transfer the electrons to carbon materials for example.
These bacteria not only play a key role in nature’s oxidation-reduction cycles but also are the key component of microbial bioelectrochemical systems (BES). Thus, the elucidation of the different microbial electron transfer pathways is of fundamental interest as well as technological relevance.
For the family of Shewanellaceae – all being considered to be facultative anaerobes - several members have been studied on their extra-cellular electron transfer behavior. Most prominently S. oneidensis MR-1 was widely studied, e.g.: [28-31], but also S. putrefaciens [32-37], S. loihica [32, 38-41], S. decolorationis [42, 43], S. japonica [44], S. frigidimarina [45, 46] and S. marisflavi [47]. Commonly, it is assumed that the two decaheme c-type cytochromes MtrC and OmcA, both facing the extracellular environment, play a key role in the direct electron transfer mechanism (DET) [28, 48-52]. Thereby, MtrC and OmcA, are part of a complex transmembrane cytochrome pool involving more than 40 proteins [53]. The MET of Shewanellaceae usually exploits flavins, like riboflavin [54] and flavinmononucleotide (FMN) [44, 55] and their derivatives, and is considered to depend on intracellular electron transfer to the redox-shuttle as well as extracellular electron transfer by MtrC or OmcA, e.g. [44, 56, 57]. Thereby it has been shown that some strains of Shewanella family (e.g. S. oneidenis (Marsili et al., 2008; Jiao et al., 2011), S. loihica (Newton et al., 2009), S. baltica (von Canstein et al., 2007), S. frigidimarina (von Canstein et al., 2007) and S. decoloratioans (Li et al., 2010)) can biosynthesize the mediators required for MET for aerobic as well as anaerobic conditions. However, the ability to synthesize suitable amounts of these electron shuttles (especially for anaerobic conditions, where energy for biosynthesis is limited) is not univocal for all Shewanella species (e.g. [54]).
Sad bacteria: http://www.clipartof.com/gallery/clipart/germ.html