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6 The following matrix shows pairwise similarities in a sequ.pdf

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Acro1988

This document provides a matrix showing the pairwise sequence similarities of a gene in four species, with values ranging from 0 to 0.9 indicating the percentage of identical sites between two sequences. It asks to compute the six pairwise JC69 distances between the species based on the similarity values and construct an UPGMA tree with branch lengths labeled on each branch.

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6 The following matrix shows pairwise similarities in a sequenced gene among four species. A value of 0.9 means the two corresponding sequences are identical in 90% of the sites. Compute the six pairwise JC69 distances (10 points) and then construct a UPGMA tree with branch lengths labelled on each branch (15 points)

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