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TERN Infrastructure
Building new ecological plot infrastructure to
enable Australian science

Stefan Caddy-Retalic
Director, Australian Transect Network
stefan.caddy-retalic@adelaide.edu.au
Rationale: What is TERN?
• A network to provide infrastructure to enable
Australian environmental science
(i.e. not research, though some capacity for demonstration projects)

• Building hard and soft infrastructure powerful
enough to help answer big ecological questions
• Improving networks across ecosystem science
community (écologistes sans frontières)
• Data and products to be made freely available
• Empowering researchers and environmental
managers
• A service to be utilised
TERN Plot Networks
• AusPlots
– Forests
– Rangelands

•
•
•
•

Australian Transect Network
Australian Super Site Network
Long Term Ecological Plot Network (LTERN)
Lots of other TERN facilities that are not plotbased (e.g. OzFlux, AusCover, Eco-Informatics,
eMast, Coasts etc)
AusPlots Rangelands
• Rangelands
81% of Australia, least studied regions, >decadal cycles

• AusPlots designed to form a network of reference
sites to be used as baseline data and for
monitoring/trajectory projection and
management.
• Most sites “best on offer”
• Include some of the most remote regions in
Australia – therefore difficult (and expensive) for
many researchers to access.
Australian Transect Network
Developing transects that are:
• Subcontinental scale
• Cross multiple IBRA bioregions
• Traverse environmental gradients (e.g.
temperature, rainfall, land use)
• Complement other TERN facilities (AusPlots,
LTERN, Super Sites, AusCover)
• Uses AusPlots Rangelands & other methodologies
AusPlots & ATN Sites
• 1 ha (100mx100m)
• 1010 point intercepts (substrate, multi strata veg)
• Plant vouchers for each species
Herbarium ID plus additional tissue for genetic and isotopic analysis (extra material for dominant spp)

• 1x 1m+ soil characterisation
Colour, texture, EC, pH, lithology etc

• 9x 30cm soil characterisation
Including soil crust for metabarcoding analysis

• Basal area
• Tri-photo point panoramas (Ben’s talk)
• Leaf Area Index
Status to date
AusPlots Forests
AusPlots Rangelands
SWATT Transect
TREND Transect

332 sites surveyed
with APR method
16 sites surveyed
with APF method
Status to date
•
•
•
•
•
•
•
•
•
•

Methodology published
Training workshops held in SA & WA
Field collection app developed
Pipeline between field collection and data repository established
Data publishing pathways operational
Data published for ~100 sites in ÆKOS
Data published in Soils 2 Satellites
~10,000 plant specimens ID’d by regional herbaria
~4 tonnes of soil deposited in National Soil Archive
Genetic and isotopic samples available to research community
Using Data: Soils 2 Satellites
www.soils2satellites.org.au

• Targeted at general users
(including scientists browsing)

• Demonstration data
visualisation tool w/ ALA
& TERN Eco-Informatics
• Users can get a sense of
site attributes including:
Landform, soils, veg composition
and structure, soil metabarcoding

• Currently ~30 sites
available (intend to upload many more).
Using Data: ÆKOS
www.aekos.org.au

• Targeted at scientists and
modellers
• Data fully described
• All data available for
download
• Suitable for new or
combined analysis
• Currently ~100 AusPlots/
ATN sites available in data portal
• Data for ~100,000 other plots nationally
Using Samples
• 332 sites of:
–
–
–
–

Pressed herbarium specimens (ID, morphology etc)
Dried leaf vouchers (DNA, isotopes, chemical analysis)
Soil samples (chemical and physical characterisation)
Surface crusts (DNA, soil microbiology, metabarcoding)

• Samples are available to researchers
– Projects likely to yield results of maximal utility to the
research and management community will be prioritised
– Subject to “share alike” principle
Take Home Messages
• TERN is charged with developing scientific
infrastructure to enable the Australian (and global)
ecosystem science community
• All TERN products will be made (or are already)
freely available
Data, software code, sample collections, etc

• We want to work with you
• New partnerships are welcome
• Help us get better at serving you
Questions?
stefan.caddy-retalic@adelaide.edu.au
UAdel: (+61) 8 8313 1257

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EcoTas13 Caddy-Retalic TERN Infrastructure

  • 1. TERN Infrastructure Building new ecological plot infrastructure to enable Australian science Stefan Caddy-Retalic Director, Australian Transect Network stefan.caddy-retalic@adelaide.edu.au
  • 2. Rationale: What is TERN? • A network to provide infrastructure to enable Australian environmental science (i.e. not research, though some capacity for demonstration projects) • Building hard and soft infrastructure powerful enough to help answer big ecological questions • Improving networks across ecosystem science community (écologistes sans frontières) • Data and products to be made freely available • Empowering researchers and environmental managers • A service to be utilised
  • 3. TERN Plot Networks • AusPlots – Forests – Rangelands • • • • Australian Transect Network Australian Super Site Network Long Term Ecological Plot Network (LTERN) Lots of other TERN facilities that are not plotbased (e.g. OzFlux, AusCover, Eco-Informatics, eMast, Coasts etc)
  • 4. AusPlots Rangelands • Rangelands 81% of Australia, least studied regions, >decadal cycles • AusPlots designed to form a network of reference sites to be used as baseline data and for monitoring/trajectory projection and management. • Most sites “best on offer” • Include some of the most remote regions in Australia – therefore difficult (and expensive) for many researchers to access.
  • 5. Australian Transect Network Developing transects that are: • Subcontinental scale • Cross multiple IBRA bioregions • Traverse environmental gradients (e.g. temperature, rainfall, land use) • Complement other TERN facilities (AusPlots, LTERN, Super Sites, AusCover) • Uses AusPlots Rangelands & other methodologies
  • 6. AusPlots & ATN Sites • 1 ha (100mx100m) • 1010 point intercepts (substrate, multi strata veg) • Plant vouchers for each species Herbarium ID plus additional tissue for genetic and isotopic analysis (extra material for dominant spp) • 1x 1m+ soil characterisation Colour, texture, EC, pH, lithology etc • 9x 30cm soil characterisation Including soil crust for metabarcoding analysis • Basal area • Tri-photo point panoramas (Ben’s talk) • Leaf Area Index
  • 7. Status to date AusPlots Forests AusPlots Rangelands SWATT Transect TREND Transect 332 sites surveyed with APR method 16 sites surveyed with APF method
  • 8. Status to date • • • • • • • • • • Methodology published Training workshops held in SA & WA Field collection app developed Pipeline between field collection and data repository established Data publishing pathways operational Data published for ~100 sites in ÆKOS Data published in Soils 2 Satellites ~10,000 plant specimens ID’d by regional herbaria ~4 tonnes of soil deposited in National Soil Archive Genetic and isotopic samples available to research community
  • 9. Using Data: Soils 2 Satellites www.soils2satellites.org.au • Targeted at general users (including scientists browsing) • Demonstration data visualisation tool w/ ALA & TERN Eco-Informatics • Users can get a sense of site attributes including: Landform, soils, veg composition and structure, soil metabarcoding • Currently ~30 sites available (intend to upload many more).
  • 10. Using Data: ÆKOS www.aekos.org.au • Targeted at scientists and modellers • Data fully described • All data available for download • Suitable for new or combined analysis • Currently ~100 AusPlots/ ATN sites available in data portal • Data for ~100,000 other plots nationally
  • 11. Using Samples • 332 sites of: – – – – Pressed herbarium specimens (ID, morphology etc) Dried leaf vouchers (DNA, isotopes, chemical analysis) Soil samples (chemical and physical characterisation) Surface crusts (DNA, soil microbiology, metabarcoding) • Samples are available to researchers – Projects likely to yield results of maximal utility to the research and management community will be prioritised – Subject to “share alike” principle
  • 12. Take Home Messages • TERN is charged with developing scientific infrastructure to enable the Australian (and global) ecosystem science community • All TERN products will be made (or are already) freely available Data, software code, sample collections, etc • We want to work with you • New partnerships are welcome • Help us get better at serving you