This document summarizes research from several publications investigating compounds that act on serotonin, dopamine, opioid, and calcium receptor systems. It describes the synthesis and evaluation of analogs of aporphine, an alkaloid, examining their effects on serotonin and dopamine receptors. It also discusses the development of opioid receptor agonists and antagonists through stereospecific synthesis and evaluation of derivative compounds. Finally, it mentions the development of cinacalcet and other calcium sensing receptor modulators for the treatment of hyperparathyroidism.
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S.T. Moe publications on opioid receptor ligands
1. Cannon, J.G., S.T. Moe, J.P. Long, and R.K. Bhatnagar. S-11-hydroxy-10-methylaporphine and its biologically active salt forms as 5HT1A inhibitors; 1993. U.S. Pat. 5,258,384.
Cannon, J.G., R. Raghupathi, and S.T. Moe. Preparation and pharmacological evaluation of enantiomers of certain nonoxygenated aporphines: (+)- and (-)-aporphine and (+)- and (-)-10-methylaporphine. J. Med. Chem. 36(10) 1316-1318, 1993.
Cannon, J.G., S.T. Moe, and J.P. Long. Enantiomers of 11-hydroxy-10-methylaporphine having opposing pharmacological effects at 5-HT1A receptors. Chirality 3(1), 19-23, 1991.
Dopamine versus serotonin
Antagonist versus agonist
dopamine
serotonin
SM-1000
(serotonin inhibitor)
Serotonin & Dopamine
2. Portoghese, P.S., S. Ohkawa, and S.T. Moe. Preparation of spiroindane opiate analogs; 1994. U. S. Pat. 5,298,622
Kshirsagar, T.A., S.T. Moe, and P.S. Portoghese. Stereospecific synthesis of pseudocodeine: [2,3]-Sigmatropic rearrangement using selenium intermediates. J. Org. Chem. 63(5), 1704-1705, 1998.
Portoghese, P.S., S. Ohkawa, S.T. Moe, and A.E. Takemori. Synthesis and delta-opioid receptor antagonist activity of naltrindole analogues with a regioisomeric indole moiety. J. Med. Chem. 37(12), 1886-1888, 1994.
Portoghese, P.S., M. Sultana, S.T. Moe, and A.E. Takemori. Synthesis of naltrexone-derived δ-opioid antagonists. Role of conformation of the δ address moiety. J. Med. Chem. 37(5), 579-585, 1994.
Portoghese, P.S., S.T. Moe, and A.E. Takemori. A selective delta-1 opioid receptor agonist derived from oxymorphone. Evidence for separate recognition sites for delta-1 opioid receptor agonists and antagonists. J. Med. Chem. 36(17), 2572-2574, 1993.
Kong, H., K. Raynor, K. Yasuda, S.T. Moe, P.S. Portoghese, G.I. Bell, and T. Reisine. A single residue, aspartic acid 95, in the δ-opioid receptor specifies selective high-affinity agonist binding. J. Biol. Chem. 268(31), 23055-23058, 1993.
morphine
enkephalin
Opioid Antagonists
3. SensiparSensipar®®
(Cinacalcet)(Cinacalcet)
• Sensipar (Cinacalcet)Sensipar (Cinacalcet)
• NPS1506 (Delucemine)NPS1506 (Delucemine)
• Ronacaleret (Glaxo)Ronacaleret (Glaxo)
• NPS1776 (Abbott)NPS1776 (Abbott)
50 uM lead
The Merck Index, 14th Edition (online)
Monograph number: 02282
Antihyperparathyroid drug
Hyperparathyroidism
4. Factors Influencing Pharmaceutical Product Design
Natural Product
Drug Models
(Phytomedicinals)
Absorption,
Distribution,
Metabolism,
Excretion
Safety,
Toxicology
Neurotransmitter-Like
Compounds
Pharmaceutical
Perspective,
(“Drug-like” Scaffolds)
Soft Drug Approach
Weak Drug Approach
Commercially
Successful
Drug Products,
(Templates)
Pharmaceutical
Relevance
(Marketability)
?Pharmacology
Synthetic
Accessibility
Drug Design
6. Step 1: Finding a ring system
NMDA antagonism (IC50) in rat cerebellar granular cells (RCGCs)
NH2
O
(2600 nM)
NH2
S
(676 nM)
NH2
(69 nM)
NH2
O
(1780 nM)
NH2
(1500 nM)
N
NH2
(609 nM)
NMDA Inhibitors
8. Design of Conformationally Restricted Analogs
NH2
F
F
NH2
F
F
NH2
F
F
NH2
F
F
NH2
F
F
X-Ray Crystal Analysis from: S.T. Moe, J. Clardy, et al., Bioorg. Med. Chem. Lett. 1999, 9, 1915-1920.
Structural Rigidification
9. 1506 reduces infarct volume by
approximately 50% in animal models of stroke
NPS 1506 - Novel NMDA Antagonist
Control NPS 1506
Ischemic Stroke
12. Complementary Approaches to
Analog Design
Active-site Residue Targeting (Crystallography).
Identify residues within reach of ligand and design analogs with
complementary functional groups within range of residue
Virtual-Library Docking (Modeling).
Dock virtual library molecules into active-site models and score.
SAR-Driven Substituent Selection (Biochemistry).
Use biochemical data as a guide to select “active” functional groups.
Traditional, Systematic Analoging (Synthetic Chemistry).
Directed at specific questions, e.g., polarity, electronic effects, logP
Diversity Analysis (Computational Chemistry).
Select a diverse set of functional groups to explore chemical space,
Drug Design Strategies
13. Parallel Synthesis
• Analogs selected
using the 5-approaches
• 80 analogs per week
• Solution phase
• 5-chemists in-house
• 6-step synthesis
• R3-Variation on step 1 !!!
D-Ala Ligase Crystal Structures
15. Michaelis Complex Model FXIa
• Michaelis complex (green) moved from the acylated
structure (grey) but the primary interactions remain
intact
• Phenylurea in the prime sites (left)
• Guanidino in the S1 pocket (center)
• Acid still H-binding to the waters
• Lactam C=O close to Oγ-Ser195 and pointing
toward the “oxyanion hole”
Factor XIa Crystal Structure
16. Silvaggi N.R., et al., Chem. Biol. 14(5):533-42, 2007.
600 analogs via
Solid phase synthesis
Moe, S.T., et al., Bioorg. Med. Chem. (manuscript submitted Jan. 2009).
Botulism Antitoxins
Editor's Notes
Outline of strategy was use when presented with the dilemma of what to synthesize.
Strategy is to use 5 complementary approaches, simultaneously.
Read slide.
Note: we are currently evaluating whether divesity analysis or similarity analysis would be more suitable.