Text mining for organism and environment names

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The document discusses text mining for recognizing organism and environment names in unstructured text. It describes using a comprehensive lexicon of organisms and environments along with expansion rules to recognize plural, adjective, and other forms in a flexible manner while filtering out common words. The text mining can be executed via a C++ batch tagger, Python API, or web service.

Science

Text mining for organism
and environment names
Lars Juhl Jensen

Jensen et al., Nature Reviews Genetics, 2012

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