Cellular networks

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This document discusses different approaches to visualizing cellular networks and the molecular interactions between proteins. It notes that there are many different types of data that could be shown, such as protein names, functions, localization, expression, modifications, and interaction types. However, it is impossible to show all this information at once. The document recommends using different visualizations like force-directed layouts to distribute proteins in 2D or lining up interactions in 1D. It acknowledges open challenges like showing time-course data and modification sites. In the end, the document thanks several researchers who have contributed to mapping and visualizing cellular networks.

Korbel et al., Nature Biotechnology, 2004

Szklarczyk et al., Nucleic Acids Research, 2017

Thank you
Damian Szklarczyk
John
"Scooter" Morris
Helen Cook
Michael Kuhn
Stefan Wyder
Milan Simonovic
Alberto Santos
Nadezhda Donch
eva
Alexander Roth
Peer Bork
Christian von Meri
ng

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