Yarmouk University                              Medical Image Processing,
                                                     Course
                  Hijjawi Faculty for Eng. Tech.                   BME 544
                  BME and MI Department              Instructor   Dr. Awad Al-Zaben
                                                     Term         Fall 2010
                                                                  Sunday, Tuesday, Thursday,
                                                     Meetings
                                                                   10:00-11:00


Instructor’s Contact Information
Office Phone        4552
Other Phone         -
Office Location     Room 503
Email Address       azaben@yu.edu.jo
Office Hours        Will be assigned

General Course Information
Pre-requisites,
                    BME 390
Co-requisites
                Fundamental concepts of low and high level image processing algorithms
                used in medical image analysis (such as those that occur in MRI, CT, PET or
                SPECT imaging). A basic review of image acquisition, through low level
Course
                processing to high level object extraction and recognition: Image
Description
                enhancement, restoration, filtering, segmentation, morphology, texture,
                presentation & description, compression, recognition & interpretation, and
                registration. These topics will be demonstrated throughout projects.
                In learning the course topics, the student will attain the following outcomes:
                1. Understand the frequency domain description of discrete-time image
                    processing.
                2. Understand the design & specification of multi-dimensional digital filters
                    for medical image processing applications.
                3. Gain proficiency in using simulation and design software tools, such as
Course Outcomes
                    those found in Matlab, MeVisLab
                4. Aware of contemporary applications of image processing in medical image
                    analysis (such as those that occur in MRI, CT, PET or SPECT imaging).
                5. Apply the concepts of Image enhancement, restoration, filtering,
                    segmentation, morphology, texture, and registration to the output medical
                    images.
                     1.To introduce students to basic image processing techniques in
                       analyzing biological images.
                     2.To develop the students mathematical, scientific, and computational
Course Objective
                       skills relevant to the field of biomedical image processing.
                     3.To enhance the students ability in formulating problems and
                       designing analysis tools for biological image.
                     1. Digital Image Processing Using MATLAB, Rafael C. Gonzalez,
Required Text
                         Richard E. Woods, Steven L. Eddins. Prentice Hall, 2003.
                     2.   Handout.

                     1.   Medical Image Processing, Reconstruction and Restoration, Jiri
References
                          Jan, Taylor & Francis Group, 2006.
                     2.   Biosignal and Biomedical Image Processing, MATLAB Based
                          Applications, John L. Semmlow. Publisher: Marcel Dekker, Inc.
Publication year 2004.
                   3.   Isaac N. Bankman, Handbook of medical imaging, Acadmic Press,
                        2000
                   4.   Rafael C. González, Richard Eugene Woods, Digital image processing.
                        Prentice Hall, 2002.

Schedule
                       Fundamentals
                       Intensity Transformations and Spatial Filtering
                       Frequency Domain Processing
                       Image Restoration
Topics                 Wavelets
                       Morphological Image Processing
                       Image Segmentation and Fusion
                       Image Transformations and Registration
                       Image Reconstruction




Course Policies
                   First Exam        20%
                   Second Exam       20%
Grading Criteria   Final Exam        50%
                   Homeworks         10%

                   In accordance with the University Regulations, it is the student responsibility
                   to be punctual and to attend all classes.
Class Attendance   An absentee withdrawal notice will be issued and the student will be deemed
                   to have withdrawn from the course if a student is absent for more than 15%
                   of the total contact hours.

                   The department expects from its students a high level of responsibility and
                   academic honesty. Because the value of an academic degree depends upon
                   the absolute integrity of the work done by the student for that degree, it is
Academic           imperative that a student demonstrate a high standard of individual honor in
Integrity          his or her scholastic work.

                   Any student who commits an act of scholastic dishonesty is subject to
                   University lows.

Syllabus bme544

  • 1.
    Yarmouk University Medical Image Processing, Course Hijjawi Faculty for Eng. Tech. BME 544 BME and MI Department Instructor Dr. Awad Al-Zaben Term Fall 2010 Sunday, Tuesday, Thursday, Meetings 10:00-11:00 Instructor’s Contact Information Office Phone 4552 Other Phone - Office Location Room 503 Email Address azaben@yu.edu.jo Office Hours Will be assigned General Course Information Pre-requisites, BME 390 Co-requisites Fundamental concepts of low and high level image processing algorithms used in medical image analysis (such as those that occur in MRI, CT, PET or SPECT imaging). A basic review of image acquisition, through low level Course processing to high level object extraction and recognition: Image Description enhancement, restoration, filtering, segmentation, morphology, texture, presentation & description, compression, recognition & interpretation, and registration. These topics will be demonstrated throughout projects. In learning the course topics, the student will attain the following outcomes: 1. Understand the frequency domain description of discrete-time image processing. 2. Understand the design & specification of multi-dimensional digital filters for medical image processing applications. 3. Gain proficiency in using simulation and design software tools, such as Course Outcomes those found in Matlab, MeVisLab 4. Aware of contemporary applications of image processing in medical image analysis (such as those that occur in MRI, CT, PET or SPECT imaging). 5. Apply the concepts of Image enhancement, restoration, filtering, segmentation, morphology, texture, and registration to the output medical images. 1.To introduce students to basic image processing techniques in analyzing biological images. 2.To develop the students mathematical, scientific, and computational Course Objective skills relevant to the field of biomedical image processing. 3.To enhance the students ability in formulating problems and designing analysis tools for biological image. 1. Digital Image Processing Using MATLAB, Rafael C. Gonzalez, Required Text Richard E. Woods, Steven L. Eddins. Prentice Hall, 2003. 2. Handout. 1. Medical Image Processing, Reconstruction and Restoration, Jiri References Jan, Taylor & Francis Group, 2006. 2. Biosignal and Biomedical Image Processing, MATLAB Based Applications, John L. Semmlow. Publisher: Marcel Dekker, Inc.
  • 2.
    Publication year 2004. 3. Isaac N. Bankman, Handbook of medical imaging, Acadmic Press, 2000 4. Rafael C. González, Richard Eugene Woods, Digital image processing. Prentice Hall, 2002. Schedule  Fundamentals  Intensity Transformations and Spatial Filtering  Frequency Domain Processing  Image Restoration Topics  Wavelets  Morphological Image Processing  Image Segmentation and Fusion  Image Transformations and Registration  Image Reconstruction Course Policies First Exam 20% Second Exam 20% Grading Criteria Final Exam 50% Homeworks 10% In accordance with the University Regulations, it is the student responsibility to be punctual and to attend all classes. Class Attendance An absentee withdrawal notice will be issued and the student will be deemed to have withdrawn from the course if a student is absent for more than 15% of the total contact hours. The department expects from its students a high level of responsibility and academic honesty. Because the value of an academic degree depends upon the absolute integrity of the work done by the student for that degree, it is Academic imperative that a student demonstrate a high standard of individual honor in Integrity his or her scholastic work. Any student who commits an act of scholastic dishonesty is subject to University lows.