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Plant Cell Wall Modification
for the Production of Biofuel
By Ben Merritt
Why Modify the Cell Wall?
• We are running out of unsustainable fuel
sources
• Plant cell wall contains “locked up” source of
carbon
Composition of Plant Cell Wall
• 3 layers
• Middle Lamella (outermost from cytoplasm;
connects cells); made of pectin
• Primary; made of pectin, cellulose,
hemicellulose, proteins
• Secondary; made of cellulose, hemicellulose,
lignin (only in mature cells)
Cellulose (Cellubiose)
Cellulose (Crystalline)
Cellulose Arrangement
Hemicellulose vs. Cellulose
Hemicellulose (Xylan), continued
Lignin
Biomass
Production
Yeast Fermentation
Perfect Biomass Plant?
• High Cellulose content
• Low lignin content
• Low ash content (unusable inorganics)
First/Second Generation Biofuel
• 1st
= using edible sugars (sucrose) from food
crops for fuel production
• 2nd
= using non-edible, structural
polysaccharides for fuel production
2nd
Generation Biofuels
• 1.5 billion tons of unused plant material each
year
• Is estimated to be equivalent to total oil
imports (442 billion liters of EtOH)
Acid Growth – Natural Cell Wall
Modification
• Mediated by auxin (cell elongation)
• Physical teasing apart of cell wall
• Expansins, endoglucanases spread apart and
degrade parts
Enhance Efficiency of Reclaim for
Ethanol
• Increase cellulose/cell wall density
• Remove unwanteds (hemicellulose, lignin)
• Incorporate soluble monomers (makes
processing easier)
• Utilize glucanases (increases growth)
• Destroy lignin-cellulose bonds (decreases lignin)
Chloroplast-Derived Enzyme Cocktail
• One team inserted:
• Endo/exoglucanase or lipase from bacteria
• Pectate Lyases
• Cutinase
• Endoglucanases
• Swollenin
• Xylanase
• Acetyl Xylan Esterase
• Beta glucosidase
“Recalcitrance of Lignocellulosic
Material”
• Cellulose evolved to be tough
• Microbes are the main cell wall metabolizers
(bacteria, fungi)
• Endoglucanases also found in guts of termites,
cockraoches, grass carps, blue mussel
Acetobacter xylinum
References
• Abramson, M., O. Shoseyov, S. Hirsch, and Z. Shani. “Genetic Modifications of Plant Cell Walls to Increase Biomass and Bioethanol Production.” Published in Advanced Biofuels and
Bioproducts. New York 2013.
•
• Buanafina, M.M., T. Langdon, B. Hauck, S. Dalton, E. Timms-Taravella, and P. Morris. “Targeting Expression of a Fungal Ferulic Acid Esterase to the Apoplast, Endoplasmic Reticulum or
Golgi can Disrupt Feruloylation of the Growing Cell Wall and Increase the Biodegradability of Tall Fescue (Festuca arundinacea). Plant Biotecnol. (8):316-331. 2010.
•
• Delmer, D.P. and Y. Amor. “Cellulose Biosynthesis.” The Plant Cell. (7):987-1000. July 1995.
•
• Fu, C., R. Sunkar, C. Zhou, H. Shen, J.Y. Zhang, J. Matts, J. Wolf, D.G. Mann, C.N. Stewart, Y. Tang et al. “Overexpression of miR156 in Switchgrass (Panicum virgatum L. Results in Various
Morphological Alterations and Leads to Improved Biomass Production. Plant Biotechnology. (10):443-452. 2012.
•
• FuturaGene. “FuturaGene Submits Genetically Modified Eucalyptus for Commercial Approval.” < http://www.futuragene.com/H421-Dossier-submission-website-May-2014-English-FINAL-
VERSION.pdf > May 2014.
•
• Furtado, A., J.S. Lupoi, N.V. Hoang, A. Healey, S. Singh, B.A. Simmons, and R.J. Henry. “Modifying Plants for Biofuel and Biomaterial Production.” Plant Biotechnology. (12):1246-1258.
October 2014.
•
• Hu, W.J., S.A. Harding, J. Lung, J.L. Popko, J. Ralph, D.D. Stokke, C.J. Tsai, and V.L. Chiang. “Repression of Lignin Biosynthesis Promotes Cellulose Accumulation and Growth in Transgenic
Trees.” Nat. Biotechnol. (17):808-812. 1999.
•
• Joshi, C.P., S. Thammannagowda, T. Fujino, J.Q. Gou, U. Avci, C.H. Haigler, L.M. McDonnell, S.D. Mansfield, B. Mengesha, N.C. Carpita, et al. “Perturbation of Wood Cellulose Synthesis
Causes Pleiotropic Effects in Transgenic Aspen. Mol. Plant. (4):331-345. 2011.
•
• Jung, J.H., W.M. Fouad, W. Vermerris, M. Gallo, and F. Altpeter. “RNAi Suppression of Lignin Biosynthesis is Sugarcane Reduces Recalcitrance for Biofuel Production from Lignocellulosic
Biomass.” Plant Biotechnol. (10):1067-1076. 2012.
•
• Lee, C., Q. Teng, W. Huang, R. Zhong, and Z.H. Ye. “Down-Regulation of PoGT47c Expression in Poplar Results in a Reduced Glucuronoxylan Content and an Increased Wood Digestibility by
Cellulase.” Plant Cell Physiol. (50):1075-1089. 2009.
•
• Levy, I., Z. Shani, and O. Shoseyov. “Modification of Polysaccharides and Plant Cell Wall by Endo-1,4-ß-glucanase and Cellulose-Binding Domains.” Biomolecular Engineering. (19):17-30.
March 2002.
•
• Park, Y.W., K. Baba, Y. Furuta, I. Iida, and K. Sameshima. “Enhancement of Growth and Cellulose Accumulation by Overexpression of Xyloglucanase in Poplar.” FEBS Lett. (564):183-187.
(2004).
•
• Rayle, D.L. and R.E. Cleland. “The Acid Growth Theory of Auxin-Induced Cell Elongation is Alive and Well.” Plant Physiol. (99):1271-1274. April 1992.
•
• Sahoo, D.K., J. Stork, S. Debolt, and I.B. Maiti. “Manipulating Cellulose Biosynthesis by Expression of Mutant Arabidopsis proM24::CESA(ixr1-2) Gene in Transgenic Tobacco.” Plant
Biotechnology. (11):362-372. 2013.
•
• Somerville, C. and J Milne. “Genetic Modification of Plant Cell Walls for Enhanced Biomass Production and Utilization.” GCEP Technical Report. 2005.
•
• Verma, D., A. Kanagaraj, S. Jin, N.D. Singh, P.E. Kolattukudy, and H. Daniell. “Chloroplast-Derived Enzyme Cocktails Hydrolyse Lignocellulosic Biomass and Release Fermentable Sugars.”
Plant Biotechnol. 8(3):332-350. April 2010.

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Plant Cell Wall Mod

  • 1. Plant Cell Wall Modification for the Production of Biofuel By Ben Merritt
  • 2. Why Modify the Cell Wall? • We are running out of unsustainable fuel sources • Plant cell wall contains “locked up” source of carbon
  • 3. Composition of Plant Cell Wall • 3 layers • Middle Lamella (outermost from cytoplasm; connects cells); made of pectin • Primary; made of pectin, cellulose, hemicellulose, proteins • Secondary; made of cellulose, hemicellulose, lignin (only in mature cells)
  • 4.
  • 8.
  • 14. Perfect Biomass Plant? • High Cellulose content • Low lignin content • Low ash content (unusable inorganics)
  • 15.
  • 16. First/Second Generation Biofuel • 1st = using edible sugars (sucrose) from food crops for fuel production • 2nd = using non-edible, structural polysaccharides for fuel production
  • 17. 2nd Generation Biofuels • 1.5 billion tons of unused plant material each year • Is estimated to be equivalent to total oil imports (442 billion liters of EtOH)
  • 18. Acid Growth – Natural Cell Wall Modification • Mediated by auxin (cell elongation) • Physical teasing apart of cell wall • Expansins, endoglucanases spread apart and degrade parts
  • 19.
  • 20.
  • 21. Enhance Efficiency of Reclaim for Ethanol • Increase cellulose/cell wall density • Remove unwanteds (hemicellulose, lignin) • Incorporate soluble monomers (makes processing easier) • Utilize glucanases (increases growth) • Destroy lignin-cellulose bonds (decreases lignin)
  • 22. Chloroplast-Derived Enzyme Cocktail • One team inserted: • Endo/exoglucanase or lipase from bacteria • Pectate Lyases • Cutinase • Endoglucanases • Swollenin • Xylanase • Acetyl Xylan Esterase • Beta glucosidase
  • 23. “Recalcitrance of Lignocellulosic Material” • Cellulose evolved to be tough • Microbes are the main cell wall metabolizers (bacteria, fungi) • Endoglucanases also found in guts of termites, cockraoches, grass carps, blue mussel
  • 25. References • Abramson, M., O. Shoseyov, S. Hirsch, and Z. Shani. “Genetic Modifications of Plant Cell Walls to Increase Biomass and Bioethanol Production.” Published in Advanced Biofuels and Bioproducts. New York 2013. • • Buanafina, M.M., T. Langdon, B. Hauck, S. Dalton, E. Timms-Taravella, and P. Morris. “Targeting Expression of a Fungal Ferulic Acid Esterase to the Apoplast, Endoplasmic Reticulum or Golgi can Disrupt Feruloylation of the Growing Cell Wall and Increase the Biodegradability of Tall Fescue (Festuca arundinacea). Plant Biotecnol. (8):316-331. 2010. • • Delmer, D.P. and Y. Amor. “Cellulose Biosynthesis.” The Plant Cell. (7):987-1000. July 1995. • • Fu, C., R. Sunkar, C. Zhou, H. Shen, J.Y. Zhang, J. Matts, J. Wolf, D.G. Mann, C.N. Stewart, Y. Tang et al. “Overexpression of miR156 in Switchgrass (Panicum virgatum L. Results in Various Morphological Alterations and Leads to Improved Biomass Production. Plant Biotechnology. (10):443-452. 2012. • • FuturaGene. “FuturaGene Submits Genetically Modified Eucalyptus for Commercial Approval.” < http://www.futuragene.com/H421-Dossier-submission-website-May-2014-English-FINAL- VERSION.pdf > May 2014. • • Furtado, A., J.S. Lupoi, N.V. Hoang, A. Healey, S. Singh, B.A. Simmons, and R.J. Henry. “Modifying Plants for Biofuel and Biomaterial Production.” Plant Biotechnology. (12):1246-1258. October 2014. • • Hu, W.J., S.A. Harding, J. Lung, J.L. Popko, J. Ralph, D.D. Stokke, C.J. Tsai, and V.L. Chiang. “Repression of Lignin Biosynthesis Promotes Cellulose Accumulation and Growth in Transgenic Trees.” Nat. Biotechnol. (17):808-812. 1999. • • Joshi, C.P., S. Thammannagowda, T. Fujino, J.Q. Gou, U. Avci, C.H. Haigler, L.M. McDonnell, S.D. Mansfield, B. Mengesha, N.C. Carpita, et al. “Perturbation of Wood Cellulose Synthesis Causes Pleiotropic Effects in Transgenic Aspen. Mol. Plant. (4):331-345. 2011. • • Jung, J.H., W.M. Fouad, W. Vermerris, M. Gallo, and F. Altpeter. “RNAi Suppression of Lignin Biosynthesis is Sugarcane Reduces Recalcitrance for Biofuel Production from Lignocellulosic Biomass.” Plant Biotechnol. (10):1067-1076. 2012. • • Lee, C., Q. Teng, W. Huang, R. Zhong, and Z.H. Ye. “Down-Regulation of PoGT47c Expression in Poplar Results in a Reduced Glucuronoxylan Content and an Increased Wood Digestibility by Cellulase.” Plant Cell Physiol. (50):1075-1089. 2009. • • Levy, I., Z. Shani, and O. Shoseyov. “Modification of Polysaccharides and Plant Cell Wall by Endo-1,4-ß-glucanase and Cellulose-Binding Domains.” Biomolecular Engineering. (19):17-30. March 2002. • • Park, Y.W., K. Baba, Y. Furuta, I. Iida, and K. Sameshima. “Enhancement of Growth and Cellulose Accumulation by Overexpression of Xyloglucanase in Poplar.” FEBS Lett. (564):183-187. (2004). • • Rayle, D.L. and R.E. Cleland. “The Acid Growth Theory of Auxin-Induced Cell Elongation is Alive and Well.” Plant Physiol. (99):1271-1274. April 1992. • • Sahoo, D.K., J. Stork, S. Debolt, and I.B. Maiti. “Manipulating Cellulose Biosynthesis by Expression of Mutant Arabidopsis proM24::CESA(ixr1-2) Gene in Transgenic Tobacco.” Plant Biotechnology. (11):362-372. 2013. • • Somerville, C. and J Milne. “Genetic Modification of Plant Cell Walls for Enhanced Biomass Production and Utilization.” GCEP Technical Report. 2005. • • Verma, D., A. Kanagaraj, S. Jin, N.D. Singh, P.E. Kolattukudy, and H. Daniell. “Chloroplast-Derived Enzyme Cocktails Hydrolyse Lignocellulosic Biomass and Release Fermentable Sugars.” Plant Biotechnol. 8(3):332-350. April 2010.