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Data to Discovery
The iPlant Collaborative
Community Cyberinfrastructure for Life Science
Nirav Merchant (nirav@email.arizona.edu)
iPlant / University of Arizona
Data to Discovery
The iPlant Collaborative: Vision
www.iPlantCollaborative.org
Enable life science researchers and educators to
use and extend cyberinfrastructure
Data to Discovery
iPlant: Layer Cake
Data to Discovery
iPlant Architectural Motivation
• We strive to be the CI Lego blocks
• Danish 'leg godt' - 'play well’
• Also translates as 'I put together' in Latin
• If a solution is not available you can craft
your own using iPlant CI components
Data to Discovery
iPlant Atmosphere
Data to Discovery
iPlant Data Store
Data to Discovery
iPlant BISQUE
Data to Discovery
How is it being used ?
• User build their own systems (powered by
iPlant components) but managed by them
• Consume specific components (a la carte,
data store, Atmosphere)
• Directly use applications (DE)
• Custom design appliances (Atmosphere)
• Publish their findings (PNAS, Nature)
• Advocate use
• Create learning material and courses
Data to Discovery
9
www.iplantcollaborative.org
iPlant’s role as an enabling CI
Example
“Powered by
iPlant” Impact
CoGE usage
and user count
after federation
and
interoperability
with iPlant
9
Data to Discovery
Why is it valuable ?
• Users are able to over come data and
computational bottle necks
• Share data of ANY size with ANYONE
• Connect data and compute on single
platform
• Manage their data and computations
regardless of scale
• Build their own apps and solutions (create
their own community iAnimal, iVirome)
• Create custom appliances
Data to Discovery
iPlant: What worked
• All major CI components have seen steady
adoption (few exception)
• “Think tank to do tank” transition was
rapid
• Evolved to a technology proving ground
• Take research products (NSF funded) to
production use for our community
• Running infrastructure is not fun, building
is. Allowing people to focus on science
(while stream line CI)
Data to Discovery
iPlant: What worked
• Evolution of training (software carpentry)
• Sharing/collaboration
• Give people exit strategy (options) and
they are happy adopt solution
• Provide feedback to CI component
creators to improve (usability)
• Expectation management: Do not expect
the same experience (cable cord cutting
v/s netflix/hulu)
Data to Discovery
What did not work
• Managing distributed teams is harder in
VO (load balancing, enthusiasm etc)
• Technology lifecycle is not synchronized
across all products
• Relying on multiple providers for solution
is challenging (downtimes)
• Changing/Evolving needs of community
are hard to predict
• Growth of users out paces our cloud
capabilities (see tweets)
Data to Discovery
Even the tech geeks notice
Data to Discovery
Connect with iPlant!
Twitter: @iPlantCollab #iPlant
Facebook: facebook.com/iPlantCollab
LinkedIn: iplant.co/iPlantCollabLinkedIn
Google+: iplant.com/iPlantGooglePlus

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AHM 2014: The iPlant Collaborative, Community Cyberinfrastructure for Life Science

  • 1. Data to Discovery The iPlant Collaborative Community Cyberinfrastructure for Life Science Nirav Merchant (nirav@email.arizona.edu) iPlant / University of Arizona
  • 2. Data to Discovery The iPlant Collaborative: Vision www.iPlantCollaborative.org Enable life science researchers and educators to use and extend cyberinfrastructure
  • 4. Data to Discovery iPlant Architectural Motivation • We strive to be the CI Lego blocks • Danish 'leg godt' - 'play well’ • Also translates as 'I put together' in Latin • If a solution is not available you can craft your own using iPlant CI components
  • 8. Data to Discovery How is it being used ? • User build their own systems (powered by iPlant components) but managed by them • Consume specific components (a la carte, data store, Atmosphere) • Directly use applications (DE) • Custom design appliances (Atmosphere) • Publish their findings (PNAS, Nature) • Advocate use • Create learning material and courses
  • 9. Data to Discovery 9 www.iplantcollaborative.org iPlant’s role as an enabling CI Example “Powered by iPlant” Impact CoGE usage and user count after federation and interoperability with iPlant 9
  • 10. Data to Discovery Why is it valuable ? • Users are able to over come data and computational bottle necks • Share data of ANY size with ANYONE • Connect data and compute on single platform • Manage their data and computations regardless of scale • Build their own apps and solutions (create their own community iAnimal, iVirome) • Create custom appliances
  • 11. Data to Discovery iPlant: What worked • All major CI components have seen steady adoption (few exception) • “Think tank to do tank” transition was rapid • Evolved to a technology proving ground • Take research products (NSF funded) to production use for our community • Running infrastructure is not fun, building is. Allowing people to focus on science (while stream line CI)
  • 12. Data to Discovery iPlant: What worked • Evolution of training (software carpentry) • Sharing/collaboration • Give people exit strategy (options) and they are happy adopt solution • Provide feedback to CI component creators to improve (usability) • Expectation management: Do not expect the same experience (cable cord cutting v/s netflix/hulu)
  • 13. Data to Discovery What did not work • Managing distributed teams is harder in VO (load balancing, enthusiasm etc) • Technology lifecycle is not synchronized across all products • Relying on multiple providers for solution is challenging (downtimes) • Changing/Evolving needs of community are hard to predict • Growth of users out paces our cloud capabilities (see tweets)
  • 14. Data to Discovery Even the tech geeks notice
  • 15. Data to Discovery Connect with iPlant! Twitter: @iPlantCollab #iPlant Facebook: facebook.com/iPlantCollab LinkedIn: iplant.co/iPlantCollabLinkedIn Google+: iplant.com/iPlantGooglePlus