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FLORA AND EVOLUTION IN THE MEDITERRANEAN AREA



    Structure of the genetic variation of
       the Sardinian taxa of Aquilegia


J.L. Garrido1, G. Bacchetta2, G. Fenu2, E. Mattana2, and C.M. Herrera1


        1
         Estación Biológica de Doñana, Consejo Superior de Investigaciones Científicas
        (Sevilla, Andalucía, Spain).
        2
         Centro Conservazione Biodiversità, Dpto. Scienze Botaniche, Università degli
        Studi di Cagliari (Cagliari, Sardinia, Italy)
INTRODUCTION:             METHODS   RESULTS   CONCLUSIONS
North American Columbines
INTRODUCTION:         METHODS   RESULTS   CONCLUSIONS
European Columbines
INTRODUCTION        METHODS:                  RESULTS                           CONCLUSIONS
                Study species: Sardinian Columbines (Arrigoni 2006, Flora dell’Isolla di Sardegna)


    Delimitation of          A. nuragica
  Sardinian Aquilegia
          taxa

                                   A. barbaricina




                                    A. nugorensis
INTRODUCTION           METHODS:     RESULTS         CONCLUSIONS
                       Study area




                                              NA1




               A. nugorensis
               A. barbaricina
               A. nuragica
INTRODUCTION            METHODS:                  RESULTS                    CONCLUSIONS
                        Genetic characterization: AFLP Analyses (Vos et al. 1995)


                          72 individuals on 15 locations


               8 (48) primers combinations (PstI +2b / MseI +3b)
                                                                  NA1



                           371 loci AFLP (189 – 500 bp)


        Contamination, reproducibility (97%), homoplasy controlled



                A. nugorensis
                A. barbaricina
                A. nuragica
INTRODUCTION                   METHODS                                         RESULTS:                 CONCLUSIONS
                                                                               NJ Method // Spatial Genetic Structure
                                                                                            Spatial Genetic Structure

               Neighbour-Joining
               tree distances
               Nei-Li
                                                                                         B1 01
                                                                                         B1 03
                                                                                         B1 04
                                                                                         B2 04
                                                                              45         B1 02
                                                                                         B2 02
               2000 bootstrap replicates                            34
                                                                                         B2 03
                                                                                         B2 01
                                                                                         B6 01
                                                                                         B6 02
               Outgroups:                                                           70
                                                                                         B6 03
                                                                                         B6 04
                                                                                         B6 05
               Isopyrum fumarioides                       25
                                                                                         B3 04
                                                                                         B4 05
               Thalictrum speciosissimun                                                 B3 01
                                                                                         B3 03
                                                                                         B3 02
                                                                          79             B3 12
                                                                                         B4 02
                                                                                         B4 03
                                                     58                                  B4 04
                                                                                         B5 02
                                                                                         B5 03
                                                                              47         B5 01
                                                                                         B5 07
                                                                                         B5 05
                                                                         27              B7 01
                                                28                                       B7 09
                                                                                         B7 07
                                                                                         B7 02
                                                                              95         B7 03
                                                                                         N5 02
                                                                                         N5 05
                                           12                                            N5 03
                                                                              47
                                                                                         N5 01
                                                                                         N5 04
                                                                                         N4 01
                                                                                         N4 04
                                                                                         N4 02
                                   19                                               52   N4 03
                                                                                         N4 05
                                                                                         N8 01
                                                                                         N8 04
                                                                                         N8 03
                                                                                    45   N8 02
                                                                              17         N8 05
                                                                                         N2 01
                                                                                         N2 02
                                                                                         N2 03
                                                                                         N1 02
                     66                                                                  N1 03
                                                                                         N3 01
                                                                                         N1 01
                                                                                         N1 05
                                                                                         N1 16
                                                                                         N3 03
                                                                    38                   N3 02
                                                                                         N3 04
                                                                                         N3 09
                                                                                         N7 01
                                                               50                        N7 07
                                                                                         N7 02
                                                                                    57   N7 03
                                                                                         N7 04
                                                                          24             N6 01
                                                                                         N6 02
                                                                                         N6 05
                    100                                                        47        N6 03
                                                                                         IFU 0
                                                                                         TS 03
INTRODUCTION                METHODS                        RESULTS:                  CONCLUSIONS
                                                           NJ Method // Spatial Genetic Structure
                                                                        K = 2 (Evanno et al. 2005)
                                                                               N7

                                                                               N6

                                                                               N1

                                                                               N3

                                                                               B6

                                                                               B1

                                                                               B2

                                                                               B7

                                                                               B5

                                                                               B3

                                                                               B4

                                                                               N4
                                                             K=3
                                                                               N8

                                                                               N5

                                                                               N2

       Individual multilocus profiles allow us to establish 2 groups (+ 1 hybrid
       subgroup) of individuals with homogeneous genetic characters.
       (STRUCTURE v.2.3.1, Pritchard et al. 2000, 2007, Falush et al. 2007).
INTRODUCTION                   METHODS                                               RESULTS                     CONCLUSIONS


           Neighbour-Joining tree                                                            NJ   K=2 K=3
                                                                                     B1 01
                                                                                     B1 03
           Nei-Li distances                                                          B1 04
                                                                                     B2 04




                                                                                                            Aquilegia barbaricina
                                                                          45         B1 02
                                                                                     B2 02
           2000 bootstrap replicates                            34
                                                                                     B2 03
                                                                                     B2 01
                                                                                     B6 01
                                                                                     B6 02
           Outgroups:                                                           70
                                                                                     B6 03
                                                                                     B6 04
                                                                                     B6 05
           Isopyrum fumarioides                       25
                                                                                     B3 04
                                                                                     B4 05
           Thalictrum speciosissimun                                                 B3 01
                                                                                     B3 03
                                                                                     B3 02
                                                                      79             B3 12
                                                                                     B4 02
                                                                                     B4 03
                                                 58                                  B4 04
                                                                                     B5 02
                                                                                     B5 03
                                                                          47         B5 01
                                                                                     B5 07
                                                                                     B5 05
                                                                     27              B7 01
                                            28                                       B7 09
                                                                                     B7 07
                                                                                     B7 02
                                                                          95         B7 03
                                                                                     N5 02
                                                                                     N5 05
                                       12                                            N5 03
                                                                          47
                                                                                     N5 01
                                                                                     N5 04
                                                                                     N4 01




                                                                                                            Aquilegia nugorensis
                                                                                     N4 04
                                                                                     N4 02
                               19                                               52   N4 03
                                                                                     N4 05
                                                                                     N8 01
                                                                                     N8 04
                                                                                     N8 03
                                                                                45   N8 02
                                                                          17         N8 05
                                                                                     N2 01
                                                                                     N2 02
                                                                                     N2 03
                                                                                     N1 02
                 66                                                                  N1 03
                                                                                     N3 01
                                                                                     N1 01
                                                                                     N1 05
                                                                                     N1 16
                                                                                     N3 03
                                                                38                   N3 02
                                                                                     N3 04
                                                                                     N3 09
                                                                                     N7 01
                                                           50                        N7 07
                                                                                     N7 02
                                                                                57   N7 03
                                                                                     N7 04
                                                                      24             N6 01
                                                                                     N6 02
                                                                                     N6 05
                100                                                        47        N6 03
                                                                                     IFU 0
                                                                                     TS 03
INTRODUCTION               METHODS                       RESULTS                     CONCLUSIONS



    Individual genotypes of Sardinian Aquilegia are structured in two main, genetically
    homogeneous groups. This conclusion has a high consistency since results from
    very different analytical bodies do agree.




                                                                                                of
                                                                                        bgrou p
                                                                                ing a su s, where
                                                                       ,s  how n group
                                                                tured oth mai
                                                           struc on of b
                                                        sub buti
                                                    urn                       .
                                             is in t t contri     rid iz in g
                                   gr oups relevan y be hyb
                          of  this            y
                                        a ver roups m
                                                         a
                    One ns with                  g
                          tio        es e mai n
                     loca      ly th
                            ab
                      prob
INTRODUCTION           METHODS                 RESULTS             CONCLUSIONS:
                                                                   Perspectives




    PHYLOGEOGRAPHY
           Possible explanations to this genotypes distribution


    EVOLUTIONARY ECOLOGY
           Adaptive radiation of Sardinian Columbines:
           European-like or North American-like differentiation?



    MACROEVOLUTION
           Relative position in Aquilegia European clade
Thanks soooooooo much to:




        Cristina Pérez                        Sample collectors


              Laboratorio de Sistemas de Información Geográfica y
              Teledetección de la Estación Biológica de Doñana (LAST-EBD-CSIC)

              Laboratorio de Ecología Molecular de la Estación Biológica
              de Doñana (LEM-EBD-CSIC)

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JLGarrido.Cagliari, July 2009.

  • 1. FLORA AND EVOLUTION IN THE MEDITERRANEAN AREA Structure of the genetic variation of the Sardinian taxa of Aquilegia J.L. Garrido1, G. Bacchetta2, G. Fenu2, E. Mattana2, and C.M. Herrera1 1 Estación Biológica de Doñana, Consejo Superior de Investigaciones Científicas (Sevilla, Andalucía, Spain). 2 Centro Conservazione Biodiversità, Dpto. Scienze Botaniche, Università degli Studi di Cagliari (Cagliari, Sardinia, Italy)
  • 2. INTRODUCTION: METHODS RESULTS CONCLUSIONS North American Columbines
  • 3. INTRODUCTION: METHODS RESULTS CONCLUSIONS European Columbines
  • 4. INTRODUCTION METHODS: RESULTS CONCLUSIONS Study species: Sardinian Columbines (Arrigoni 2006, Flora dell’Isolla di Sardegna) Delimitation of A. nuragica Sardinian Aquilegia taxa A. barbaricina A. nugorensis
  • 5. INTRODUCTION METHODS: RESULTS CONCLUSIONS Study area NA1 A. nugorensis A. barbaricina A. nuragica
  • 6. INTRODUCTION METHODS: RESULTS CONCLUSIONS Genetic characterization: AFLP Analyses (Vos et al. 1995) 72 individuals on 15 locations 8 (48) primers combinations (PstI +2b / MseI +3b) NA1 371 loci AFLP (189 – 500 bp) Contamination, reproducibility (97%), homoplasy controlled A. nugorensis A. barbaricina A. nuragica
  • 7. INTRODUCTION METHODS RESULTS: CONCLUSIONS NJ Method // Spatial Genetic Structure Spatial Genetic Structure Neighbour-Joining tree distances Nei-Li B1 01 B1 03 B1 04 B2 04 45 B1 02 B2 02 2000 bootstrap replicates 34 B2 03 B2 01 B6 01 B6 02 Outgroups: 70 B6 03 B6 04 B6 05 Isopyrum fumarioides 25 B3 04 B4 05 Thalictrum speciosissimun B3 01 B3 03 B3 02 79 B3 12 B4 02 B4 03 58 B4 04 B5 02 B5 03 47 B5 01 B5 07 B5 05 27 B7 01 28 B7 09 B7 07 B7 02 95 B7 03 N5 02 N5 05 12 N5 03 47 N5 01 N5 04 N4 01 N4 04 N4 02 19 52 N4 03 N4 05 N8 01 N8 04 N8 03 45 N8 02 17 N8 05 N2 01 N2 02 N2 03 N1 02 66 N1 03 N3 01 N1 01 N1 05 N1 16 N3 03 38 N3 02 N3 04 N3 09 N7 01 50 N7 07 N7 02 57 N7 03 N7 04 24 N6 01 N6 02 N6 05 100 47 N6 03 IFU 0 TS 03
  • 8. INTRODUCTION METHODS RESULTS: CONCLUSIONS NJ Method // Spatial Genetic Structure K = 2 (Evanno et al. 2005) N7 N6 N1 N3 B6 B1 B2 B7 B5 B3 B4 N4 K=3 N8 N5 N2 Individual multilocus profiles allow us to establish 2 groups (+ 1 hybrid subgroup) of individuals with homogeneous genetic characters. (STRUCTURE v.2.3.1, Pritchard et al. 2000, 2007, Falush et al. 2007).
  • 9. INTRODUCTION METHODS RESULTS CONCLUSIONS Neighbour-Joining tree NJ K=2 K=3 B1 01 B1 03 Nei-Li distances B1 04 B2 04 Aquilegia barbaricina 45 B1 02 B2 02 2000 bootstrap replicates 34 B2 03 B2 01 B6 01 B6 02 Outgroups: 70 B6 03 B6 04 B6 05 Isopyrum fumarioides 25 B3 04 B4 05 Thalictrum speciosissimun B3 01 B3 03 B3 02 79 B3 12 B4 02 B4 03 58 B4 04 B5 02 B5 03 47 B5 01 B5 07 B5 05 27 B7 01 28 B7 09 B7 07 B7 02 95 B7 03 N5 02 N5 05 12 N5 03 47 N5 01 N5 04 N4 01 Aquilegia nugorensis N4 04 N4 02 19 52 N4 03 N4 05 N8 01 N8 04 N8 03 45 N8 02 17 N8 05 N2 01 N2 02 N2 03 N1 02 66 N1 03 N3 01 N1 01 N1 05 N1 16 N3 03 38 N3 02 N3 04 N3 09 N7 01 50 N7 07 N7 02 57 N7 03 N7 04 24 N6 01 N6 02 N6 05 100 47 N6 03 IFU 0 TS 03
  • 10. INTRODUCTION METHODS RESULTS CONCLUSIONS Individual genotypes of Sardinian Aquilegia are structured in two main, genetically homogeneous groups. This conclusion has a high consistency since results from very different analytical bodies do agree. of bgrou p ing a su s, where ,s how n group tured oth mai struc on of b sub buti urn . is in t t contri rid iz in g gr oups relevan y be hyb of this y a ver roups m a One ns with g tio es e mai n loca ly th ab prob
  • 11. INTRODUCTION METHODS RESULTS CONCLUSIONS: Perspectives PHYLOGEOGRAPHY Possible explanations to this genotypes distribution EVOLUTIONARY ECOLOGY Adaptive radiation of Sardinian Columbines: European-like or North American-like differentiation? MACROEVOLUTION Relative position in Aquilegia European clade
  • 12. Thanks soooooooo much to: Cristina Pérez Sample collectors Laboratorio de Sistemas de Información Geográfica y Teledetección de la Estación Biológica de Doñana (LAST-EBD-CSIC) Laboratorio de Ecología Molecular de la Estación Biológica de Doñana (LEM-EBD-CSIC)