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Intracellular cargo transport:
Molecular motors playing
tug-of-war
Melanie J.I. Müller,
Stefan Klumpp, Reinhard Lipowsky
Department of Theory & Bio-Systems
Max Planck Institute for Colloids and Interfaces
Outline
1) Intracellular cargo transport
& molecular motors
3) Why such weird motion?
2) Motors playing tug-of-war
a) fair play
b) unfair
1) Intracellular cargo transport
& molecular motors
Cell = chemical micro-factory
Alberts et al., Essential cell biology (1998)
Molecular motors
• Molecular motors
= nanotrucks
- Roads: filaments
- Fuel: ATP
- Cargo: vesicles, organelles…
Travis, Science 261:1112 (1993)www.herculesvanlines.com (2008)
www.inetnebr.com/stuart/ja (2008)
• Nanoscale
→ Stochastic (Brownian) motion
→ Unbinding from filament ('fly')
after ~ 1 μm
Cytoskeleton
MTOC
+
+ +
+
+
+
+
-
--
-
-
-- -
Alberts et al., Essential cell biology (1998)
• Filaments are one-way streets:
Filaments:
• actin = side roads
• microtubules = highways
= unidirectional
road network
www.bildarchiv-hamburg.de (2008)
Bidirectional motion in vivo
Transport of endsosomes in fungus Ustilago maydis
Gero Fink 2006, Steinberg lab, MPI for Terrestrial Microbiology, ~ 2x real time, 60 μm hypha, endosome velocity ~ 2 μm/sec
+
_
Filament direction
time [s]
trajectory [μm]
Bidirectional motion
• Bidirectional motion on
unidirectional filaments
→ plus and minus motors
on one cargo
trajectory [μm]
time [s]
Gero Fink, MPI for Terrestristrial Mikcrobiology (2006)
Ashkin et al., Nature 348: 346 (1990)
0.1 μm
• Teams of 1-10 motors
Why?
• Why bidirectional motion?
→ later
• How does it work?
Why no blockade?
trajectory [μm]
time [s]
~ 2 μm/s
as for one species alone
Coordination
• Hypothetical coordination
complex
Coordination
complex
• mechanical interaction
• Tug-of-war model:
- model for single motor
- mechanical interaction
or tug-of-war?
v
π ε
• Velocity v
• Binding rate π
• Unbinding rate ε
Theoretician‘s view of a motor
• Motor characterized by
v(F)F
π(F) ε(F)
• Under load-force F
→ force-dependent parameters
• (F)
• (F)
• (F)
• Scales: many sec, many μm
→ step details irrelevant (0.01 s)
→ protein stucture irrelevant (100 nm)
→ motor unbinding relevant (1 μm)
• Velocity decreases with force
Model for a single motor
Velocity [μm/s]
Load F [pN]
Stall
force FS
• Velocity ≈ 0 for high forces → blockade
Load F [pN]
Unbinding rate [1/s]
~ exp[F/Fd]
detachment
force
• Unbinding rate increases
exponentially with force
• Binding rate independent of force
• ‘strong motor’:
stall force Fs > detachment force Fd
2) Molecular motors
playing
tug-of-war
Tug-of-war model
v(F)F
π
ε(F)
Single motors with rates from
single molecule experiments
• Opposing motors → load force
• Motors of one team share force
• Forces determined by:
- Balance of motor forces
(+ cargo friction + external force)
- All motors move with one velocity
• Master equation
• Observation time sec - min → stationary state
• Analysis: numerical calculations, simulations,
analytical approximations
Tug-of-war model
Types of motion
Motors block each other
→ no motion
Minus motors win
→ motion to minus end
Plus motors win
→ motion to plus end
Types of motion
Stochastic motion → what are the probabilities?
Plus motion
Slow motion
Minus motion
Symmetric: Plus and minus motors only differ in forward direction
E.g. in vitro antiparallel microtubules
2a) Tug-of-war: fair play
Weak motors
• Weak motors := exert less force than they can sustain
stall force Fs < detachment force Fd
• Motors don’t feel each other
→ random binding and unbinding
x x
Weak motors
• highest probability for same number of bound motors
(0,0)
• blockade!
'Strong' motors:
switching between fast
plus / minus motion
'Weak' motors:
little motion
motor number
trajectory [μm]
time [s]
(−)
(+)
(0)
motor number
probability
(0)
Motility states
trajectory [μm]
time [s]
Strong motors
• For motors with larger stall than detachment force
Force on cargo FC
FC/2 FC/3 FC/1 FC/3
Slow motion Fast motion
Unbinding cascade
leads to fast motion
Strong motors
• Unbinding cascade → only one team remains bound
(0,0)
• Unbinding cascade
'Strong' motors:
switching between fast
plus / minus motion
Intermediate case:
fast plus and minus
motion with pauses
'Weak' motors:
little motion
motor number
trajectory [μm]
time [s]
(−)
(+)
(0)
(−)
motor numbermotor number
probability
(0)
(+)
(0) (−+)(−0+)
Motility states
trajectory [μm]
time [s]
trajectory [μm]
time [s]
4 plus and 4 minus motors
zz
desorptionconstantK=ε0/π0
stall force Fs / detachment force Fd
ungebunden
(0)
(−+)
(−0+)trajectory [μm]
trajectory [μm]
trajectory [μm]
Weak motors
‘Weak' motors:
stall force Fs < detachment force Fd
→ motors don’t feel each other
→ analytical solution
desorptionconstantK=ε0/π0
(0)
(−+)
stall force Fs / detachment force Fd
→ slow motion (0)
(−0+)
Strong motors
Unbinding
cascade
→ fast bidirectional motion (−+)
desorptionconstantK=ε0/π0
(0)
(−+)
stall force Fs / detachment force Fd
(−0+)
‘Strong' motors:
stall force Fs > detachment force Fd
Strong motors
• Unbinding cascade → 1D random walk → exact solution
(0,0)
• Unbinding cascade
Strong motors
desorptionconstantK=ε0/π0
(0)
(−+)
stall force Fs / detachment force Fd
(−0+)
‘Strong' motors:
stall force Fs > detachment force Fd
Intermediate case
desorptionconstantK=ε0/π0
(0)
(−+)
stall force Fs / detachment force Fd
(−0+)
Intermediate case:
stall force Fs ~ detachment force Fd
Mean field approximation
desorptionconstantK=ε0/π0
(0)
(−+)
stall force Fs / detachment force Fd
(−0+)
desorptionconstantK=ε0/π0
stall force Fs / detachment force Fd
Stationary solution ↔ fixed points
Transitions between motility
states ↔ bifurcations
saddle-
node
bifurcation
transcritical
bifurcation
2D nonlinear dynamical
system for <n+>, <n–>
Sharp maxima approximation
• Probability concentrated around maxima
→ dynamics only on maxima and nearest neighbours
(0,0)
Sharp maxima approximation
desorptionconstantK=ε0/π0
(0)
(−+)
stall force Fs / detachment force Fd
(−0+)
desorptionconstantK=ε0/π0
(−0+)
(−+)
(0)
stall force Fs / detachment force Fd
Tug-of-war animation
4 plus and 4 minus motors
• Change of motor parameters ↔ cellular regulation
zz
desorptionconstantK=ε0/π0
(0)
stall force Fs / detachment force Fd
ungebunden
Kin1cDyn cDyn
Kin2Kin3
Kin5
• Sensitivity → efficient regulation of cago motion
Biological
parameter
range
(−0+)
(−+)
Asymmetric: e.g. dynein and kinesin
→ Motility states: all combinations of (+), (-), (0)
2b) Tug-of-war: unfair play
Asymmetric tug-of-war
→ 7 motility states (+), (–), (0), (–+), (0+), (–0), (–0+)
→ net motion possible
Comparison to experiment
• Slow motion (blockade)
Experiment:
Fast motion in each direction
• Why people didn’t believe in a tug-of-war before:
• Slow motion (blockade)
Unbinding cascade
→ fast motion
Comparison to experiment
• Why people didn’t believe in a tug-of-war before:
• Slow motion (blockade)
• Stronger motors
determine direction
Stronger = higher stall force
Experiment:
stall forces do not
determine direction
Comparison to experiment
• Why people didn’t believe in a tug-of-war before:
• Slow motion (blockade)
• Stronger motors
determine direction
→ 'Stronger' can mean
- generate larger force
- bind stronger to filament
- resist pulling force better
→ direction not only
determined by (stall) forces
Comparison to experiment
• Why people didn’t believe in a tug-of-war before:
Run times and lengths
• Experimental characterization → run times and lengths
distance [μm]
time [s]
run
length
run time
• determine net direction, velocity, diffusivity
• target of cellular regulation
• Slow motion (blockade)
• Stronger motors
determine direction
• Impairing one direction
enhances the other
→ impairing one direction
can have various effects
plus minus
cellular regulation ↓ ─
dynein mutations ↓ ↓
kinesin mutation ↓ ↑
Comparison to experiment
• Why people didn’t believe in a tug-of-war before:
Regulation and mutation
• Dynein mutation = changing dynein properties
• Examples:
- increase dynein's unbinding rate
→ minus runs, plus runs
• Cellular regulation = changing motor properties
• Change one parameter → impair / enhance
• Change several parameters
→ various effects of changing many properties
shorter
longer
longer
shorter
- increase dynein's resistance to force
→ minus runs, plus runs
• Slow motion (blockade)
• Stronger motors
determine direction
• Impairing one direction
enhances the other
Impairing one direction
(regulation / mutation)
can have various effects
on the other direction
Comparison to experiment
• Why people didn’t believe in a tug-of-war before:
Comparison to experiment
Gero Fink, MPI for Terrestrial Microbiology (2006)
time [s]
distance [μm]
Endosomes in fungal hypha:
time [s]
distance [μm]
Simulation trajectory:
→ looks similar
→ good comparison: data with statistics
Comparison to experiment
• Bidirectional transport
of lipid-droplets
in Drosophila embryos
trajectory [nm]
time [s]
Gross et al., J. Cell Biol. 148:945 (2000)quest.nasa.gov/projects/flies/LifeCycle.html
• Data from Gross lab (UC Irvine):
- Statistics on run lengths, velocities, stall forces
- effect of cellular regulation (2 embryonic phases)
- effect of 3 dynein mutations
→ Tug-of-war reproduces experimental data within 10 %
→ no coordination complex necessary
3) Why
Why bidirectional motion?
Why instead of ?
• Search for target
• Error correction
• Avoid obstacles
• Cargos without destination
• Easy and fast regulation
• Bidirectional transport of cargo and motors
Why instead of ?
Summary
Bidirectional transport
as tug-of-war of molecular motors
• simple model, but
complex and cooperative motility
• fast bidirectional motion ‘despite’ tug-of-war
• complex parameter-dependence
→ efficient regulation of motility
• consistent with in vivo data
Thank you
Yan
Chai
Stefan
Klumpp
Janina
BeegChristian
Korn
Steffen
Liepelt
Thank you
for your attention!
Reinhard
Lipowsky

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Intracellular cargo transport: Molecular motors playing tug-of-war

  • 1. Intracellular cargo transport: Molecular motors playing tug-of-war Melanie J.I. Müller, Stefan Klumpp, Reinhard Lipowsky Department of Theory & Bio-Systems Max Planck Institute for Colloids and Interfaces
  • 2. Outline 1) Intracellular cargo transport & molecular motors 3) Why such weird motion? 2) Motors playing tug-of-war a) fair play b) unfair
  • 3. 1) Intracellular cargo transport & molecular motors
  • 4. Cell = chemical micro-factory Alberts et al., Essential cell biology (1998)
  • 5. Molecular motors • Molecular motors = nanotrucks - Roads: filaments - Fuel: ATP - Cargo: vesicles, organelles… Travis, Science 261:1112 (1993)www.herculesvanlines.com (2008) www.inetnebr.com/stuart/ja (2008) • Nanoscale → Stochastic (Brownian) motion → Unbinding from filament ('fly') after ~ 1 μm
  • 6. Cytoskeleton MTOC + + + + + + + - -- - - -- - Alberts et al., Essential cell biology (1998) • Filaments are one-way streets: Filaments: • actin = side roads • microtubules = highways = unidirectional road network www.bildarchiv-hamburg.de (2008)
  • 7. Bidirectional motion in vivo Transport of endsosomes in fungus Ustilago maydis Gero Fink 2006, Steinberg lab, MPI for Terrestrial Microbiology, ~ 2x real time, 60 μm hypha, endosome velocity ~ 2 μm/sec + _ Filament direction time [s] trajectory [μm]
  • 8. Bidirectional motion • Bidirectional motion on unidirectional filaments → plus and minus motors on one cargo trajectory [μm] time [s] Gero Fink, MPI for Terrestristrial Mikcrobiology (2006) Ashkin et al., Nature 348: 346 (1990) 0.1 μm • Teams of 1-10 motors
  • 9. Why? • Why bidirectional motion? → later • How does it work? Why no blockade? trajectory [μm] time [s] ~ 2 μm/s as for one species alone
  • 10. Coordination • Hypothetical coordination complex Coordination complex • mechanical interaction • Tug-of-war model: - model for single motor - mechanical interaction or tug-of-war?
  • 11. v π ε • Velocity v • Binding rate π • Unbinding rate ε Theoretician‘s view of a motor • Motor characterized by v(F)F π(F) ε(F) • Under load-force F → force-dependent parameters • (F) • (F) • (F) • Scales: many sec, many μm → step details irrelevant (0.01 s) → protein stucture irrelevant (100 nm) → motor unbinding relevant (1 μm)
  • 12. • Velocity decreases with force Model for a single motor Velocity [μm/s] Load F [pN] Stall force FS • Velocity ≈ 0 for high forces → blockade Load F [pN] Unbinding rate [1/s] ~ exp[F/Fd] detachment force • Unbinding rate increases exponentially with force • Binding rate independent of force • ‘strong motor’: stall force Fs > detachment force Fd
  • 14. Tug-of-war model v(F)F π ε(F) Single motors with rates from single molecule experiments • Opposing motors → load force • Motors of one team share force • Forces determined by: - Balance of motor forces (+ cargo friction + external force) - All motors move with one velocity
  • 15. • Master equation • Observation time sec - min → stationary state • Analysis: numerical calculations, simulations, analytical approximations Tug-of-war model
  • 16. Types of motion Motors block each other → no motion Minus motors win → motion to minus end Plus motors win → motion to plus end
  • 17. Types of motion Stochastic motion → what are the probabilities? Plus motion Slow motion Minus motion
  • 18. Symmetric: Plus and minus motors only differ in forward direction E.g. in vitro antiparallel microtubules 2a) Tug-of-war: fair play
  • 19. Weak motors • Weak motors := exert less force than they can sustain stall force Fs < detachment force Fd • Motors don’t feel each other → random binding and unbinding x x
  • 20. Weak motors • highest probability for same number of bound motors (0,0) • blockade!
  • 21. 'Strong' motors: switching between fast plus / minus motion 'Weak' motors: little motion motor number trajectory [μm] time [s] (−) (+) (0) motor number probability (0) Motility states trajectory [μm] time [s]
  • 22. Strong motors • For motors with larger stall than detachment force Force on cargo FC FC/2 FC/3 FC/1 FC/3 Slow motion Fast motion Unbinding cascade leads to fast motion
  • 23. Strong motors • Unbinding cascade → only one team remains bound (0,0) • Unbinding cascade
  • 24. 'Strong' motors: switching between fast plus / minus motion Intermediate case: fast plus and minus motion with pauses 'Weak' motors: little motion motor number trajectory [μm] time [s] (−) (+) (0) (−) motor numbermotor number probability (0) (+) (0) (−+)(−0+) Motility states trajectory [μm] time [s] trajectory [μm] time [s]
  • 25. 4 plus and 4 minus motors zz desorptionconstantK=ε0/π0 stall force Fs / detachment force Fd ungebunden (0) (−+) (−0+)trajectory [μm] trajectory [μm] trajectory [μm]
  • 26. Weak motors ‘Weak' motors: stall force Fs < detachment force Fd → motors don’t feel each other → analytical solution desorptionconstantK=ε0/π0 (0) (−+) stall force Fs / detachment force Fd → slow motion (0) (−0+)
  • 27. Strong motors Unbinding cascade → fast bidirectional motion (−+) desorptionconstantK=ε0/π0 (0) (−+) stall force Fs / detachment force Fd (−0+) ‘Strong' motors: stall force Fs > detachment force Fd
  • 28. Strong motors • Unbinding cascade → 1D random walk → exact solution (0,0) • Unbinding cascade
  • 29. Strong motors desorptionconstantK=ε0/π0 (0) (−+) stall force Fs / detachment force Fd (−0+) ‘Strong' motors: stall force Fs > detachment force Fd
  • 30. Intermediate case desorptionconstantK=ε0/π0 (0) (−+) stall force Fs / detachment force Fd (−0+) Intermediate case: stall force Fs ~ detachment force Fd
  • 31. Mean field approximation desorptionconstantK=ε0/π0 (0) (−+) stall force Fs / detachment force Fd (−0+) desorptionconstantK=ε0/π0 stall force Fs / detachment force Fd Stationary solution ↔ fixed points Transitions between motility states ↔ bifurcations saddle- node bifurcation transcritical bifurcation 2D nonlinear dynamical system for <n+>, <n–>
  • 32. Sharp maxima approximation • Probability concentrated around maxima → dynamics only on maxima and nearest neighbours (0,0)
  • 33. Sharp maxima approximation desorptionconstantK=ε0/π0 (0) (−+) stall force Fs / detachment force Fd (−0+) desorptionconstantK=ε0/π0 (−0+) (−+) (0) stall force Fs / detachment force Fd
  • 35. 4 plus and 4 minus motors • Change of motor parameters ↔ cellular regulation zz desorptionconstantK=ε0/π0 (0) stall force Fs / detachment force Fd ungebunden Kin1cDyn cDyn Kin2Kin3 Kin5 • Sensitivity → efficient regulation of cago motion Biological parameter range (−0+) (−+)
  • 36. Asymmetric: e.g. dynein and kinesin → Motility states: all combinations of (+), (-), (0) 2b) Tug-of-war: unfair play
  • 37. Asymmetric tug-of-war → 7 motility states (+), (–), (0), (–+), (0+), (–0), (–0+) → net motion possible
  • 38. Comparison to experiment • Slow motion (blockade) Experiment: Fast motion in each direction • Why people didn’t believe in a tug-of-war before:
  • 39. • Slow motion (blockade) Unbinding cascade → fast motion Comparison to experiment • Why people didn’t believe in a tug-of-war before:
  • 40. • Slow motion (blockade) • Stronger motors determine direction Stronger = higher stall force Experiment: stall forces do not determine direction Comparison to experiment • Why people didn’t believe in a tug-of-war before:
  • 41. • Slow motion (blockade) • Stronger motors determine direction → 'Stronger' can mean - generate larger force - bind stronger to filament - resist pulling force better → direction not only determined by (stall) forces Comparison to experiment • Why people didn’t believe in a tug-of-war before:
  • 42. Run times and lengths • Experimental characterization → run times and lengths distance [μm] time [s] run length run time • determine net direction, velocity, diffusivity • target of cellular regulation
  • 43. • Slow motion (blockade) • Stronger motors determine direction • Impairing one direction enhances the other → impairing one direction can have various effects plus minus cellular regulation ↓ ─ dynein mutations ↓ ↓ kinesin mutation ↓ ↑ Comparison to experiment • Why people didn’t believe in a tug-of-war before:
  • 44. Regulation and mutation • Dynein mutation = changing dynein properties • Examples: - increase dynein's unbinding rate → minus runs, plus runs • Cellular regulation = changing motor properties • Change one parameter → impair / enhance • Change several parameters → various effects of changing many properties shorter longer longer shorter - increase dynein's resistance to force → minus runs, plus runs
  • 45. • Slow motion (blockade) • Stronger motors determine direction • Impairing one direction enhances the other Impairing one direction (regulation / mutation) can have various effects on the other direction Comparison to experiment • Why people didn’t believe in a tug-of-war before:
  • 46. Comparison to experiment Gero Fink, MPI for Terrestrial Microbiology (2006) time [s] distance [μm] Endosomes in fungal hypha: time [s] distance [μm] Simulation trajectory: → looks similar → good comparison: data with statistics
  • 47. Comparison to experiment • Bidirectional transport of lipid-droplets in Drosophila embryos trajectory [nm] time [s] Gross et al., J. Cell Biol. 148:945 (2000)quest.nasa.gov/projects/flies/LifeCycle.html • Data from Gross lab (UC Irvine): - Statistics on run lengths, velocities, stall forces - effect of cellular regulation (2 embryonic phases) - effect of 3 dynein mutations → Tug-of-war reproduces experimental data within 10 % → no coordination complex necessary
  • 49. Why bidirectional motion? Why instead of ? • Search for target • Error correction • Avoid obstacles • Cargos without destination • Easy and fast regulation • Bidirectional transport of cargo and motors Why instead of ?
  • 50. Summary Bidirectional transport as tug-of-war of molecular motors • simple model, but complex and cooperative motility • fast bidirectional motion ‘despite’ tug-of-war • complex parameter-dependence → efficient regulation of motility • consistent with in vivo data