Presentation on the Darwin Core standard for data exchange and the germplasm extension for genebanks during the 2014 workshop of the ECPGR Documentation and Information Working Group "Tailoring the Documentation of Plant Genetic Resources in Europe to the Needs of the User" (http://www.ecpgr.cgiar.org/working_groups/documentation_information/docinfo2014.html) in Prague-Ruzyně, Czech Republic, 20th May 2014.
Short URL: https://goo.gl/C5UEnU
DOI: http://doi.org/10.13140/RG.2.2.10865.28006
Darwin Core extension for germplasm (11th December 2013)Dag Endresen
Presentation on the Darwin Core germplasm extension for the "1st International e-Conference on Germplasm Data Interoperability: Session 2", 11th December 2013 (https://sites.google.com/site/germplasminteroperability/). Publishing germplasm information on plant genetic resources and their traits using the Darwin Core standard and the germplasm extension for genebanks.
Persistent identifiers for digitized specimens (2013)Dag Endresen
Persistent identifiers (PID) for digitized museum collections. Presented at the European GBIF meeting at Digitarium in Jounsuu, Finland, 6 March 2013. A proposed model for assigning UUID PIDs using QR-codes during the imaging and digitization process.
Data publication meeting at the Department of Ecology and Natural Resource Management, Norwegian University of Life Sciences (NMBU), GBIF Norway and the Norwegian Biodiversity Information Centre (Artsdatabanken).
Knowledge Organization System (KOS) for biodiversity information resources, G...Dag Endresen
Slides from a presentation on the Knowledge Organization System (KOS) work program for GBIF. KOS developments for biodiversity information resources and input to the emerging Vocabulary Management Task Group (VoMaG).
Links
GBIF KOS prototype tools, http://kos.gbif.org/
Tool: Semantic Wiki prototype, http://terms.gbif.org/wiki/
Tool: ISOcat prototype demo, http://kos.gbif.org/isocat/
GBIF concept vocabulary term browser, http://kos.gbif.org/termbrowser/
GBIF Resources Repository, http://rs.gbif.org/terms/
GBIF Vocabulary Server, http://vocabularies.gbif.org/
GBIF Resources Browser, http://tools.gbif.org/resource-browser/
#HepaticaWeek April 2016, GBIF data publishingDag Endresen
Citizen science species observation reporting and data publishing with the Global Biodiversity Information Facility (GBIF). Video feed available at: https://youtu.be/t22QmFPcvOM?t=34m4s
Darwin Core extension for germplasm (11th December 2013)Dag Endresen
Presentation on the Darwin Core germplasm extension for the "1st International e-Conference on Germplasm Data Interoperability: Session 2", 11th December 2013 (https://sites.google.com/site/germplasminteroperability/). Publishing germplasm information on plant genetic resources and their traits using the Darwin Core standard and the germplasm extension for genebanks.
Persistent identifiers for digitized specimens (2013)Dag Endresen
Persistent identifiers (PID) for digitized museum collections. Presented at the European GBIF meeting at Digitarium in Jounsuu, Finland, 6 March 2013. A proposed model for assigning UUID PIDs using QR-codes during the imaging and digitization process.
Data publication meeting at the Department of Ecology and Natural Resource Management, Norwegian University of Life Sciences (NMBU), GBIF Norway and the Norwegian Biodiversity Information Centre (Artsdatabanken).
Knowledge Organization System (KOS) for biodiversity information resources, G...Dag Endresen
Slides from a presentation on the Knowledge Organization System (KOS) work program for GBIF. KOS developments for biodiversity information resources and input to the emerging Vocabulary Management Task Group (VoMaG).
Links
GBIF KOS prototype tools, http://kos.gbif.org/
Tool: Semantic Wiki prototype, http://terms.gbif.org/wiki/
Tool: ISOcat prototype demo, http://kos.gbif.org/isocat/
GBIF concept vocabulary term browser, http://kos.gbif.org/termbrowser/
GBIF Resources Repository, http://rs.gbif.org/terms/
GBIF Vocabulary Server, http://vocabularies.gbif.org/
GBIF Resources Browser, http://tools.gbif.org/resource-browser/
#HepaticaWeek April 2016, GBIF data publishingDag Endresen
Citizen science species observation reporting and data publishing with the Global Biodiversity Information Facility (GBIF). Video feed available at: https://youtu.be/t22QmFPcvOM?t=34m4s
EURISCO and GBIF IPT, at the Vavilov Institute in St Petersburg (27 April 2010)Dag Endresen
Visit to the NI Vavilov Institute for Plant Industry (VIR) in April 2010. Installation of the GBIF IPT toolkit for data publishing as a test upgrade for the EURISCO data infrastructure of European genebanks.
Global Biodiversity Information Facility - 2013Dag Endresen
Presentation of the Global Biodiversity Information Facility (GBIF), GBIF-Norway and the Norwegian Biodiversity Information Centre (NBIC, Artsdatabanken) at the Norwegian Institute for Forestry and Landscape (Skog og Landskap) at Ås outside Oslo on the 17th October 2013. Seminar together with the Norwegian Biodiversity Information Centre (NBIC, Artsdatabanken).
GBIF-Norway status for the 6th European GBIF nodes meeting April 2014Dag Endresen
Slides prepared for the 6th European GBIF nodes meeting in Brussels. At the meeting these slides was replaced by a live online demo of these tools. Topics include citizen science transcription of specimen labels, persistent identifiers and custom collection portals. All slides are CC-by.
GBIF BIFA mentoring, Day 4b Event core, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
TDWG and GBIF, at European genbank network meeting (Bonn, April 2004)Dag Endresen
Presentation of TDWG and GBIF for the ECP/GR D&I Network meeting at ZADI Bonn Germany 11th April 2005. Dag Endresen (Nordic Gene Bank). TDWG is a standardization body for Biodiversity Information Standards; GBIF is a Global Biodiversity Information Facility for free and open access to biodiversity data.
Data exchange alternatives, GIGA TAG (2009)Dag Endresen
GIGA TAG meeting at Bioversity International, Rome, Italy 18th May 2009. Data exchange alternatives for the Global Information on Germplasm Accessions (GIGA) project. Dag Endresen (Bioversity/NordGen).
GBIF BIFA mentoring, Day 5a Data management, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
Credits: EUDAT/OpenAire, December 2015 & May 2016, CC-BY-4.0
* http://www.slideshare.net/EUDAT/eudat-research-data-management
* http://www.slideshare.net/EUDAT/research-data-management-introduction-eudatopen-aire-webinar?ref=https://eudat.eu/events/webinar/research-data-management-an-introductory-webinar-from-openaire-and-eudat
* https://eudat.eu/events/webinar/research-data-management-an-introductory-webinar-from-openaire-and-eudat
* http://www.instantpresenter.com/WebConference/RecordingDefault.aspx?c_psrid=EB57D6888147
GBIF BIFA mentoring, Day 2 Publish data, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
Presentation Open Science from the Global Biodiversity Information Facility at the Living Norway colloquium in Trondheim on 12 October 2020.
Slides credit: based on slides created by the GBIF Secretariat Scientific Officer; Biodiversity Open Data Ambassadors [ https://www.gbif.org/article/6dNF1d0tgcI4cmqeoS2sQ4/biodiversity-open-data-ambassadors ]. Video recording available at https://youtu.be/OpvxH6hj9K8?t=5786
CC-BY 4.0 Dag Endresen https://orcid.org/0000-0002-2352-5497
See also http://bit.ly/biodiversityinformatics
Trait Mining, prediction of agricultural traits in plant genetic resources with ecological parameters. Focused Identification of Germplasm Strategy (FIGS). For the Vavilov seminars at the IPK Gatersleben 13th June 2007. Dag Endresen, Michael Mackay, Kenneth Street.
Introduction to GBIF. GBIF seminar in Bergen. 2016-12-14Dag Endresen
GBIF data publishing seminar at the Department for Biology at the University of Bergen. http://www.gbif.no/events/2016/data-publishing-seminar-in-bergen.html
Intro to GBIF: Infrastructures and Platforms for Environmental Crowd Sensing ...Kyle Copas
Slides presented while representing GBIF—the Global Biodiversity Information Facility (http://gbif.org)—at 'Infrastructures and Platforms for Environmental Crowd Sensing and Big Data' at the European Environment Agency on 9 Sept 2015. The session was part of EnviroInfo and ICT for Sustainability, a three-day conference in Copenhagen hosted by the University of Copenhagen in collaboration with the European Environment Agency.
EURISCO demo installations of IPT, at GBIF EU Nodes meeting in Alicante (11 M...Dag Endresen
Regional GBIF NODES meeting of Europe in March 2010. Presentation of current activities from the NordGen NODE. Implementations of the GBIF IPT toolkit for genebanks in Europe. Upgrade for selected genebanks from the BioCASE publishing toolkit to the IPT. First step of a scheduled larger implementation planned to start in 2011 as part of the EuroGeneBank application pending EU funding decision. NordGen IPT EURISCO
GBIF data publishing. GBIF seminar in Bergen. 2016-12-14Dag Endresen
GBIF data publishing seminar at the Department for Biology at the University of Bergen. http://www.gbif.no/events/2016/data-publishing-seminar-in-bergen.html
GBIF BIFA mentoring, Day 1 GBIF intro, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
Towards 2030. Strategy seminar for the Research Section at the UiO Natural History Museum in Oslo on 8-9 November 2018. Strategic directions for GBIF and GBIF.no and the UiO Natural History Museum. Progress towards a long-term permanent GBIF research data infrastructure in Norway and a sustainable and actionable GBIF Node consortium.
Global Biodiversity Information Facility (GBIF) - 2012Dag Endresen
Presentation of the Global Biodiversity Information Facility (GBIF) and GBIF Norway for the Department of Technical and Scientific Conservation (CONSERV) at the Natural History Museum, University of Oslo. Tøyen, Oslo, 7 November 2012.
GBIF data portal, ECPGR working group (2017-03-16)Dag Endresen
GBIF data portal. Invited speaker at the ECPGR Barley and Forage working group meeting in Malmö, 2017-03-14 to 16. The workshop included publication of genebank accession and collection data in the European Genebank Search Catalog (EURISCO). Topics also included demonstrations on how to publish characterization & evaluation (C&E) trait data in EURISCO.
See also
* GBIF.no home page: http://www.gbif.no/news/2017/ecpgr-workshop.html
* GBIF/Bioversity task group report on data fitness for use in agrobiodiversity: http://www.gbif.org/resource/82283
* ECPGR Documentation & Information meeting in May 2014: https://www.slideshare.net/DagEndresen/european-agrobidioversity-ecpgr-network-meeting-on-eurisco-central-crop-databases-and-users-prague-may-2014
Using and extending Darwin Core for structured attribute dataCyndy Parr
Presented at the Biodiversity Information Standards (Taxonomic Databases Working Group) 2013 meeting in Florence, Italy on 29 October 2013. Essentially, an introduction to the new trait repository of Encyclopedia of Life.
EURISCO and GBIF IPT, at the Vavilov Institute in St Petersburg (27 April 2010)Dag Endresen
Visit to the NI Vavilov Institute for Plant Industry (VIR) in April 2010. Installation of the GBIF IPT toolkit for data publishing as a test upgrade for the EURISCO data infrastructure of European genebanks.
Global Biodiversity Information Facility - 2013Dag Endresen
Presentation of the Global Biodiversity Information Facility (GBIF), GBIF-Norway and the Norwegian Biodiversity Information Centre (NBIC, Artsdatabanken) at the Norwegian Institute for Forestry and Landscape (Skog og Landskap) at Ås outside Oslo on the 17th October 2013. Seminar together with the Norwegian Biodiversity Information Centre (NBIC, Artsdatabanken).
GBIF-Norway status for the 6th European GBIF nodes meeting April 2014Dag Endresen
Slides prepared for the 6th European GBIF nodes meeting in Brussels. At the meeting these slides was replaced by a live online demo of these tools. Topics include citizen science transcription of specimen labels, persistent identifiers and custom collection portals. All slides are CC-by.
GBIF BIFA mentoring, Day 4b Event core, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
TDWG and GBIF, at European genbank network meeting (Bonn, April 2004)Dag Endresen
Presentation of TDWG and GBIF for the ECP/GR D&I Network meeting at ZADI Bonn Germany 11th April 2005. Dag Endresen (Nordic Gene Bank). TDWG is a standardization body for Biodiversity Information Standards; GBIF is a Global Biodiversity Information Facility for free and open access to biodiversity data.
Data exchange alternatives, GIGA TAG (2009)Dag Endresen
GIGA TAG meeting at Bioversity International, Rome, Italy 18th May 2009. Data exchange alternatives for the Global Information on Germplasm Accessions (GIGA) project. Dag Endresen (Bioversity/NordGen).
GBIF BIFA mentoring, Day 5a Data management, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
Credits: EUDAT/OpenAire, December 2015 & May 2016, CC-BY-4.0
* http://www.slideshare.net/EUDAT/eudat-research-data-management
* http://www.slideshare.net/EUDAT/research-data-management-introduction-eudatopen-aire-webinar?ref=https://eudat.eu/events/webinar/research-data-management-an-introductory-webinar-from-openaire-and-eudat
* https://eudat.eu/events/webinar/research-data-management-an-introductory-webinar-from-openaire-and-eudat
* http://www.instantpresenter.com/WebConference/RecordingDefault.aspx?c_psrid=EB57D6888147
GBIF BIFA mentoring, Day 2 Publish data, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
Presentation Open Science from the Global Biodiversity Information Facility at the Living Norway colloquium in Trondheim on 12 October 2020.
Slides credit: based on slides created by the GBIF Secretariat Scientific Officer; Biodiversity Open Data Ambassadors [ https://www.gbif.org/article/6dNF1d0tgcI4cmqeoS2sQ4/biodiversity-open-data-ambassadors ]. Video recording available at https://youtu.be/OpvxH6hj9K8?t=5786
CC-BY 4.0 Dag Endresen https://orcid.org/0000-0002-2352-5497
See also http://bit.ly/biodiversityinformatics
Trait Mining, prediction of agricultural traits in plant genetic resources with ecological parameters. Focused Identification of Germplasm Strategy (FIGS). For the Vavilov seminars at the IPK Gatersleben 13th June 2007. Dag Endresen, Michael Mackay, Kenneth Street.
Introduction to GBIF. GBIF seminar in Bergen. 2016-12-14Dag Endresen
GBIF data publishing seminar at the Department for Biology at the University of Bergen. http://www.gbif.no/events/2016/data-publishing-seminar-in-bergen.html
Intro to GBIF: Infrastructures and Platforms for Environmental Crowd Sensing ...Kyle Copas
Slides presented while representing GBIF—the Global Biodiversity Information Facility (http://gbif.org)—at 'Infrastructures and Platforms for Environmental Crowd Sensing and Big Data' at the European Environment Agency on 9 Sept 2015. The session was part of EnviroInfo and ICT for Sustainability, a three-day conference in Copenhagen hosted by the University of Copenhagen in collaboration with the European Environment Agency.
EURISCO demo installations of IPT, at GBIF EU Nodes meeting in Alicante (11 M...Dag Endresen
Regional GBIF NODES meeting of Europe in March 2010. Presentation of current activities from the NordGen NODE. Implementations of the GBIF IPT toolkit for genebanks in Europe. Upgrade for selected genebanks from the BioCASE publishing toolkit to the IPT. First step of a scheduled larger implementation planned to start in 2011 as part of the EuroGeneBank application pending EU funding decision. NordGen IPT EURISCO
GBIF data publishing. GBIF seminar in Bergen. 2016-12-14Dag Endresen
GBIF data publishing seminar at the Department for Biology at the University of Bergen. http://www.gbif.no/events/2016/data-publishing-seminar-in-bergen.html
GBIF BIFA mentoring, Day 1 GBIF intro, July 2016Dag Endresen
GBIF BIFA mentoring in Los Banos, Philippines for the South-East Asian ASEAN Biodiversity Heritage Parks. With Dr. Yu-Huang Wang, Dr. Po-Jen Chiang, and Guan-Shuo Mai from TaiBIF the GBIF node of Taiwan (Chinese Tapei); and the Biodiversity Informatics team at ASEAN Centre For Biodiversity. http://www.gbif.no/events/2016/gbif-bifa-mentoring.html
Towards 2030. Strategy seminar for the Research Section at the UiO Natural History Museum in Oslo on 8-9 November 2018. Strategic directions for GBIF and GBIF.no and the UiO Natural History Museum. Progress towards a long-term permanent GBIF research data infrastructure in Norway and a sustainable and actionable GBIF Node consortium.
Global Biodiversity Information Facility (GBIF) - 2012Dag Endresen
Presentation of the Global Biodiversity Information Facility (GBIF) and GBIF Norway for the Department of Technical and Scientific Conservation (CONSERV) at the Natural History Museum, University of Oslo. Tøyen, Oslo, 7 November 2012.
GBIF data portal, ECPGR working group (2017-03-16)Dag Endresen
GBIF data portal. Invited speaker at the ECPGR Barley and Forage working group meeting in Malmö, 2017-03-14 to 16. The workshop included publication of genebank accession and collection data in the European Genebank Search Catalog (EURISCO). Topics also included demonstrations on how to publish characterization & evaluation (C&E) trait data in EURISCO.
See also
* GBIF.no home page: http://www.gbif.no/news/2017/ecpgr-workshop.html
* GBIF/Bioversity task group report on data fitness for use in agrobiodiversity: http://www.gbif.org/resource/82283
* ECPGR Documentation & Information meeting in May 2014: https://www.slideshare.net/DagEndresen/european-agrobidioversity-ecpgr-network-meeting-on-eurisco-central-crop-databases-and-users-prague-may-2014
Using and extending Darwin Core for structured attribute dataCyndy Parr
Presented at the Biodiversity Information Standards (Taxonomic Databases Working Group) 2013 meeting in Florence, Italy on 29 October 2013. Essentially, an introduction to the new trait repository of Encyclopedia of Life.
Darwin Core extension for genebanks (germplasm), at Kansas University (May 2012)Dag Endresen
The Darwin Core terms can be seen as an extension to the standard Dublin Core metadata terms. The new Darwin Core extension for genebanks declares the additional terms required for describing genebank datasets, and is based on established standards from the plant genetic resources community. The Global Biodiversity Information Facility (GBIF) provides an information infrastructure for biodiversity data including a suite of software tools for data publishing, distributed data access, and the capture of biodiversity data. The Darwin Core extension for genebanks is a key component that provides access for the genebanks and the plant genetic resources community to the GBIF informatics infrastructure including the new toolkits for data exchange.
Presentation delivered in the context of the Agricultural Data Interoperability WG meeeting, during the RDA 3rd Plenary Meeting in Dublin, Ireland. 26/3/2014.
The presentation is mostly focused on the work done by the agINFRA project towards proposing a methodology for the definition of Germplasm descriptors as RDF, based on the existing work of experts in the field and making use of the existing effort in this direction.
Publishing Germplasm Vocabularies as Linked DataValeria Pesce
What has already been published?
What may still be needed?
How to do it?
This presentation is a part of the 3rd Session of the 1st International e-Conference on Germplasm Data Interoperability https://sites.google.com/site/germplasminteroperability/
Workshop about research data archiving and open access publishing at the Rese...Dag Endresen
The Research Council of Norway (RCN) organizes a workshop on 1st November 2016 to collect experiences on research data archiving and open access data publishing. The Norwegian GBIF-node will present the GBIF framework including dataset DOIs and download DOIs.
See also:
GBIF.no (2016), http://www.gbif.no/news/2016/data-archiving-ncr.html
GBIF GB21 (2014), http://www.gbif.org/newsroom/news/gb21-science-symposium
GBIF GB21 Slides, http://www.gbif.org/resource/81918
Vimeo video (2014), https://vimeo.com/107148220#t=6m28s
Building a Network of Interoperable and Independently Produced Linked and Ope...Michel Dumontier
Over 15 years ago, Sir Tim Berners Lee proclaimed the founding of an exciting new future involving intelligent agents operating over smarter data in order to perform complex tasks at the behest of their human controllers. At the heart of this vision lies an uneasy alliance between tedious formal knowledge representations and powerful analytics over big, but often messy data. Bio2RDF, our decade old open source project to create Linked Data for the life sciences, has weaved emergent Semantic Web technologies such as ontologies and Linked Data to generate FAIR - Findable, Accessible, Interoperable, and Reusable - data in the form of billions of machine accessible statements for use in downstream biomedical discovery.
This revolution in data publication has been strengthened by action from global bioinformatics institutions such as the NCBI, NCBO, EBI, and DBCLS. Notably, NCBI's PubChem has successfully coupled large scale data integration with community-based standards to offer a remakable biochemical knowledge resource amenable to data hungry discovery tools. Yet, in the face of increasing pressure from researchers, funders, and publishers, will these approaches be sufficient for growing and maintaining a comprehensive knowledge graph that is inclusive of all biomedical research?
The Power of Semantic Technologies to Explore Linked Open DataOntotext
Atanas Kiryakov's, Ontotext’s CEO, presentation at the first edition of Graphorum (http://graphorum2017.dataversity.net/) – a new forum that taps into the growing interest in Graph Databases and Technologies. Graphorum is co-located with the Smart Data Conference, organized by the digital publishing platform Dataversity.
The presentation demonstrates the capabilities of Ontotext’s own approach to contributing to the discipline of more intelligent information gathering and analysis by:
- graphically explorinh the connectivity patterns in big datasets;
- building new links between identical entities residing in different data silos;
- getting insights of what type of queries can be run against various linked data sets;
- reliably filtering information based on relationships, e.g., between people and organizations, in the news;
- demonstrating the conversion of tabular data into RDF.
Learn more at http://ontotext.com/.
Scientific Advisory Committee (SAC) meeting May 2023 for the Global Information System (GLIS) of the Plant Treaty (ITPGRFA) of the United Nations Food and Agriculture Organization (FAO)
Global Information Systems for Plant Genetic Resources (2009)Dag Endresen
Global information systems for plant genetic resources. For the Caucasus germplasm network training course at the Nordic Genetic Resource Center (NordGen), Alnarp Sweden 29th January 2009.
This is one out of a series of presentations which I have given during a recent trip to the United States. I will make them all public, but content does not vary a lot between some of them
Sharing of germplasm data sets, at the TDWG 2006 conferenceDag Endresen
Data exchange for germplasm data sets with PyWrapper/BioCASE. TDWG 2006 conference, 16th October 2006, St. Louis. Dag Endresen, Johan Bäckman, Helmut Knupffer, Samy Gaiji.
GBIF web services for biodiversity data, for USDA GRIN, Washington DC, USA (2...Dag Endresen
Presentation of GBIF and the sharing of biodiversity data with web services. USDA GRIN Beltsville Washington DC, 13th December 2005. GBIF is the Global Biodiversity Information Facility for free and open access to biodiversity data.
USING E-INFRASTRUCTURES FOR BIODIVERSITY CONSERVATION - Module 3Gianpaolo Coro
An e-Infrastructure is a distributed network of service nodes, residing on multiple sites and managed by one or more organizations. e-Infrastructures allow scientists residing at distant places to collaborate. They offer a multiplicity of facilities as-a-service, supporting data sharing and usage at different levels of abstraction, e.g. data transfer, data harmonization, data processing workflows etc. e-Infrastructures are gaining an important place in the field of biodiversity conservation. Their computational capabilities help scientists to reuse models, obtain results in shorter time and share these results with other colleagues. They are also used to access several and heterogeneous biodiversity catalogues.
In this course, the D4Science e-Infrastructure will be used to conduct experiments in the field of biodiversity conservation. D4Science hosts models and contributions by several international organizations involved in the biodiversity conservation field. The course will give students an overview of the models, the practices and the methods that large international organizations like FAO and UNESCO apply by means of D4Science. At the same time, the course will introduce students to the basic concepts under e-Infrastructures, Virtual Research Environments, data sharing and experiments reproducibility.
GBIF & GRScicoll, Høstseminar Norges museumsforbunds Seksjon for natur, 2021-...Dag Endresen
Norges museumsforbunds Seksjon for natur og Naturhistorisk museum ønsker velkommen til Høstseminar! Natur i museum – forskning, formidling og samlinger
24. og 25. november 2021
Dag Endresen (GBIF) (20 min foredrag, 10 min spørsmål)
Digitalisering og GBIF. Registering av samlinger i GrSciColl og Wikidata og publisering av samlingsdata i GBIF.
Genebanks as GBIF data providers, the first experiences, at the TDWG 2004 con...Dag Endresen
Genebanks as GBIF data providers - the first experiences. Helmut Knüpffer and Norbert Biermann (IPK Gatersleben), Dag Endresen (Nordic Gene Bank), Pawel Kolasinski and Wieslaw Podyma (IHAR), Javier de la Torre (BGBM, ENBI). Presented at TDWG 2004 conference in Christchurch, New Zealand, 13 October 2004.
Prototype germplasm data portal (2006)Dag Endresen
Prototype Germplasm Data Portal, predecessor for the ALIS-Global of the GIGA project. Presentation for the Nordic Gene Bank board meeting on 4th December 2006.
Scott Edmunds: GigaScience - a journal or a database? Lessons learned from th...GigaScience, BGI Hong Kong
Scott Edmunds talk at the HUPO congress in Geneva, September 6th 2011 on GigaScience - a journal or a database? Lessons learned from the Genomics Tsunami.
Joint GBIF Biodiversa+ symposium in Helsinki on 2024-04-16Dag Endresen
GBIF Norway contributed to a symposium organized jointly by Biodiversa+ and GBIF, to discuss the requirements for national biodiversity monitoring hubs in the context of proposals for a European Biodiversity Observation Coordination Centre.
Modelling Research Expeditions in Wikidata: Best Practice for Standardisation...Dag Endresen
TDWG 2023 Hobart, 2023-10-10.
Sabine von Mering, Paul Jean-Charles Braun, Robert W. N. Cubey, Quentin Groom, Elspeth M Haston, Annika Hendriksen, Rukaya Johaadien, Siobhan Leachman, Luke Marsden, Heimo Rainer, Joaquim Santos, Dag Endresen. https://doi.org/10.3897/biss.7.111427
See also https://www.wikidata.org/wiki/Wikidata:WikiProject_Research_expeditions
Ontologies for biodiversity informatics, UiO DSC June 2023Dag Endresen
GBIF Norway was invited to the UiO Digital Scholar Centre Data (DSC) Managers Network meeting on 2023-06-08 to present how we use biodiversity ontologies. https://www.gbif.no/news/2023/biodiversity-ontologies.html
The UiO Natural History Museum (GBIF Norway) presented the evacuation of the Kherson herbarium in Ukraine at the 2023 annual conference for the Norwegian Association of Archives. Plenary 2023-06-01.
More information at: https://www.gbif.no/news/2023/privatarkivkonferansen.html
Video at: https://www.gbif.no/news/2023/video/2023-06-kherson-herbarium.mp4
BioDT for the UiO Science section meeting 2023-03-24Dag Endresen
Presentation of the Biodiversity Digital Twin (BioDT) project for the University of Oslo (UiO) Natural History Museum (NHMO) Science department on 2023-03-24.
BioDATA final conference in Oslo, November 2022Dag Endresen
BioDATA – Biodiversity data management skills for students (2018-2022). BioDATA is an international project on developing skills in biodiversity data management and data publishing for undergraduate and postgraduate students from Armenia, Belarus, Norway, Tajikistan, and Ukraine. The project is coordinated by the University of Oslo (Norway) and supported by the Global Biodiversity Information Facility (GBIF). The project is funded by the Directorate for Higher Education and Skills (HKDir). The final closing symposium for all partner universities was organized at the University of Oslo Natural History Museum in Oslo from 11th to 12th November 2022.
GBIF data mobilisation for the Nansen Legacy, Tromsø, 2022-09-20Dag Endresen
Nansen Legacy (Arven etter Nansen, AeN) - Marine data publishing workshop. 3-day workshop to publish marine biodiversity data from the AeN project as Darwin Core Archives on September 20-22, 2022. With support from the Norwegian Global Biodiversity Information Facility (GBIF) node, and the Ocean Biodiversity Information System (OBIS, EurOBIS). https://www.gbif.no/events/2022/nansen-legacy-tromso.html
GBIF at Living Norway Open Science Lab 2022-03-03Dag Endresen
Presentation of GBIF at the Living Norway Open Science Lab on 2022-03-03. See program at
https://livingnorway.no/join-the-living-norway-ecological-data-network-through-our-open-science-lab/
https://livingnorway.no/2022/02/10/join-our-open-science-lab/
https://www.gbif.no/events/2022/open-science-lab-1.html
Råd fra GBIF-Norge til datainfrastrukturutvalget i dialogmøte 2021-11-19Dag Endresen
[Råd 1] Norske forskningsdata bør publiseres i henhold til internasjonale data-standarder. Internasjonale data-standarder sikrer interoperabilitet og reelle muligheter for gjenbruk av data. Etablerte data-standarder innenfor et fagområde gir ofte best effekt for realisert gjenbruk, men kan hindre gjenbruk av data i nye og uforutsette tverrfaglige studier og sammenhenger. Norge bør derfor også bidra til tverrfaglig videreutvikling av interoperabilitet på tvers av data-standarder som er i anvendelse innenfor de enkelte fagområder.
[Råd 2] Måloppnåelse for økt deling av forskningsdata blir enklere med effektive insentiver. Vi tror at etablering av forskningsdata som siterbart vitenskapelig produkt slik som DORA (sfdora.org, 2012) og Force11 (force11.org, 2011) beskriver gir viktige retningslinjer som datainfrastrukturutvalget bør forsøke å integrere i nye Norske retningslinjer.
[Råd 3] Metrikk for å måle gjennomslag og innflytelse (impact) av forskning ("tellekanter") bør utvides til å inkludere metrikk for anerkjennelse av datakilde (data-publikasjon, data-sitering) for både forsker og institusjon. Publisering av forskningsdata bør fortrinnsvis utføres gjennom en profesjonell infrastruktur (slik som GBIF) der opphavsmann og de ulike bidragsytere til produksjon, innsamling, tilretteleggelse, håndtering, og bevaring av data kan registreres. Dataset bør tilordnes stabil digital identitet, gjennom løsninger slik som DOI (digital object identifier). Personer bør knyttes til stabil digital identitet gjennom løsninger slik som ORCID (Open Researcher and Contributor ID, orcid.org). Institusjoner bør knyttes til stabil digital identitet gjennom system løsninger slik som ROR (Research Organization Registry, ror.org).
[Råd 4] Etablering av infrastruktur for forskningsdata tar tid og behøver derfor kontinuitet og forutsigbare rammer, mandat, og langsiktig strategisk investering. Effektiv langsiktig investering i felles internasjonale løsninger krever ofte bedre kontinuitet enn det som er mulig innenfor handlingsrommet for basisfinansiering for enkelte forskningsinstitusjoner og universiteter. Samtidig som felles multi-nasjonal investering i fellesløsninger ofte har en betydelig lavere kostnad enn en alternativ mere fragmentert infrastruktur.
GBIF Norge (GBIF.no) er den norske deltagernoden i Global Biodiversity Information Facility (GBIF.org). GBIF er en internasjonal organisasjon som arbeider for fri og åpen tilgang til globalt dekkende informasjon om biologisk mangfold. GBIF ble etablert i 2001 etter en beslutning i OECDs Science Forum i 1999. Norge ble medlem av GBIF i 2004 og den norske deltagernoden, GBIF Norge, ble etablert med sekretariat ved Universitet i Oslo Naturhistorisk Museum i nært samarbeid med Artsdatabanken og med finansiering fra Forskningsrådet. GBIF Norges mandat omfatter nasjonal deltagelse i GBIF med internasjonal publisering av norske artsdata i henhold til internasjonale data-standarder som er forvaltet av GBIF.
Lecture for a course at NTNU, 27th January 2021
CC-BY 4.0 Dag Endresen https://orcid.org/0000-0002-2352-5497
See also http://bit.ly/biodiversityinformatics
https://www.gbif.no/events/2021/lecture-ntnu-gbif.html
BioDATA capacity enhancement curriculum at GBIF GB26 Global Nodes Meeting in ...Dag Endresen
BioDATA Biodiversity Data for Internationalization in Higher Education is funded by the Norwegian Agency for International Cooperation and Quality Enhancement in Higher Education (DIKU) -- and is based on reusing training materials from the GBIF Biodiversity Information for Development (BID) program funded by the European Commission.
GBIF-Norway node story lightning talk at GB26 in Leiden, October 2019Dag Endresen
The Nodes training at the start of the Nodes meeting focussed on Nodes strategies, administration, and governance tools. Some of the nodes stories were presented at the Global Nodes Meeting. Norway has an operational GBIF Node providing nationally important data pathways that are very well integrated into national information systems. However, there is not yet any solution in place for funding after 2019. In less than 3 months the node might be left without any node budget. Unfortunately, this is a situation far too many of the GBIF Nodes recognize alarmingly well - if they even have any appropriate node budget at all.
Open science curriculum for students, June 2019Dag Endresen
Living Norway seminar on Open Science in Trondheim 12th June 2019.
https://livingnorway.no/2019/04/26/living-norway-seminar-2019/
https://www.gbif.no/events/2019/living-norway-seminar.html
Event core and new datatypes in GBIF - 10th European GBIF Nodes Meeting in Ta...Dag Endresen
Integrating event-core and other new and complex data types (data models) in GBIF. Data types inside Darwin Core not yet supported in GBIF. Introduction for starting the discussions at the 10th European GBIF Nodes Meeting in Tallinn Estonia 15th May 2018. See also: http://bit.ly/gbifEu2018_datatypes | http://bit.ly/gbifEu2018_new_datatypes | DOI: 10.13140/RG.2.2.16667.36641
GBIF/OBIS hackathon in Brussels January 2018Dag Endresen
From 16 to 17 January 2018 biological data experts was meeting in Brussels to exchange experiences and use cases for the (relatively) new Darwin Core Event core and how the standard can be used in Marine and terrestrial contexts. By discussing use cases we aimed at providing guidelines on best practices of this new standard.
See also:
http://www.gbif.no/news/2018/gbif_obis_event_core_workshop.html
http://www.gbif.no/news/2018/documents/2018-01-17_event_core_mof_dwciri.pptx
DERIVATION OF MODIFIED BERNOULLI EQUATION WITH VISCOUS EFFECTS AND TERMINAL V...Wasswaderrick3
In this book, we use conservation of energy techniques on a fluid element to derive the Modified Bernoulli equation of flow with viscous or friction effects. We derive the general equation of flow/ velocity and then from this we derive the Pouiselle flow equation, the transition flow equation and the turbulent flow equation. In the situations where there are no viscous effects , the equation reduces to the Bernoulli equation. From experimental results, we are able to include other terms in the Bernoulli equation. We also look at cases where pressure gradients exist. We use the Modified Bernoulli equation to derive equations of flow rate for pipes of different cross sectional areas connected together. We also extend our techniques of energy conservation to a sphere falling in a viscous medium under the effect of gravity. We demonstrate Stokes equation of terminal velocity and turbulent flow equation. We look at a way of calculating the time taken for a body to fall in a viscous medium. We also look at the general equation of terminal velocity.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
Salas, V. (2024) "John of St. Thomas (Poinsot) on the Science of Sacred Theol...Studia Poinsotiana
I Introduction
II Subalternation and Theology
III Theology and Dogmatic Declarations
IV The Mixed Principles of Theology
V Virtual Revelation: The Unity of Theology
VI Theology as a Natural Science
VII Theology’s Certitude
VIII Conclusion
Notes
Bibliography
All the contents are fully attributable to the author, Doctor Victor Salas. Should you wish to get this text republished, get in touch with the author or the editorial committee of the Studia Poinsotiana. Insofar as possible, we will be happy to broker your contact.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...
European agrobiodioversity, ECPGR network meeting on EURISCO, Central Crop Databases and Users (Prague, May 2014)
1.
ECPGR Documentation & Information Network meeting
Workshop 20-22 May 2014, Prague-Ruzyně, Czech Republic
Data exchange: the Darwin Core
and other approaches
Dag Endresen
GBIF-Norway, Natural History Museum of the University in Oslo (NHM-UiO)
Global Biodiversity Information Facility (GBIF)
20th May 2014
2. Why
did
we
make
a
Darwin
Core
extension
for
germplasm
data?
à Upgrade germplasm data pathways to
use web services
The objective (1) was to enable sharing of germplasm information using
the standard web-service based biodiversity data publishing toolkits
maintained by the Global Biodiversity Information Facility (GBIF) and the
Biodiversity Information Standards (TDWG).
à Upgrade data types to include trait data
The objective (2) was to expand on the germplasm data types published
to germplasm data portal from basic passport data to include in particular
crop trait information.
2
4. The compatibility of data standards
between PGR and biodiversity
collections made it possible to
integrate the worldwide germplasm
collections into the biodiversity
community (TDWG, GBIF).
Potential of the GBIF technology
http://data.gbif.org/datasets/network/2
http://www.gbif.org/network/ae3a42e4-5829-4210-8d8a-84b0cbda47bc
Using GBIF/TDWG technology
(and contributing to its
development), the PGR
community can more easily
establish specific PGR networks
without duplicating GBIF's work.
2,122,405 records of germplasm data (status May 2014)
4
5. GBIF enables free and open access to biodiversity data online.
We are an international government-initiated and funded
initiative focused on making biodiversity data available to
all and anyone, for scientific research, conservation and
sustainable development.
5
May 2014
6. GBIF and GEO
Intergovernmental group on earth observations
Data Integration &
Interoperability
GBIF provides the infrastructure for
delivering species occurrence data.
GEO
BON
Biodiversity observation
network
6
Agriculture
JECAM.org
8. The European Genetic Resources Search Catalogue (EURISCO) receives data from the National
Inventories (NI) and provides access to all ex situ PGR accessions in Europe, http://eurisco.ecpgr.org
1,084,457 germplasm accessions from Europe
351 institutes – 44 countries (May 2014)
9. A total of 64 ECPGR Central Crop Databases have been established by individual
institutes and the ECPGR Working Groups. The databases hold passport data and, to
varying degrees, characterization and primary evaluation data of the major collections of
the respective crops in Europe,
http://www.ecpgr.cgiar.org/germplasm_databases/central_crop_databases.html
(8 databases)
(10 databases)
(6 databases)
(10 databases)
(8 databases)
(22 databases)
12. Possible
Upgraded
PGR
Network
Model
v Each dataset is shared from
the holding gene bank.
v The National Inventory (NI)
endorse all national gene
banks for EURISCO.
v ECPGR Crop databases can
access passport data from
EURISCO and additional crop
specific data from the gene
bank IPT interface.
v Standard data sharing tools
ensure that the genebank
dataset is available to other
relevant decentralized
thematic, regional or global
networks.
Illustration from the GBIF
annual report 2009, page 47.
12
18. Mostly a mapping of MCPD terms
to Darwin Core.
The first DRAFT version (0.1) was
released in August 2009.
Mapping
of
MCPD
à
Darwin
Core
was
required
before
using
the
GBIF
IPT
18
19. The Darwin Core extension for germplasm
data is an extension to the Darwin Core
standard.
Includes additional terms required for
describing germplasm resources that were
missing in Darwin Core.
Provides a mapping of MCPD terms and
Darwin Core terms.
• Endresen, D., S. Gaiji, and T. Robertson (2009). Darwin Core Germplasm extension and
deployment in the GBIF infrastructure. Proceedings of TDWG 2009, Montpellier, France.
Bioversity Information Standards (TDWG).
• Endresen, D.T.F. and H. Knüpffer (2012). The Darwin Core extension for genebanks opens up
new opportunities for sharing genebank data sets. Biodiversity Informatics 8:11-29.
Darwin Core extension for germplasm
19
20. Darwin Core
“The Darwin Core is primarily based on taxa,
their occurrence in nature as documented by
observations, specimens, and samples, and
related information.”
• a well-defined standard core vocabulary
• a flexible framework to maximize re-usability
• approved as TDWG standard in 2009
http://rs.tdwg.org/dwc/
Wieczorek J., D. Bloom, R. Guralnick, S. Blum, M. Döring, R. Giovanni, T. Robertson, D.
Vieglais (2012). Darwin Core: An Evolving Community-Developed Biodiversity Data Standard.
PLoS ONE 7(1): e29715. doi:10.1371/journal.pone.0029715
20
21. Darwin Core – a vocabulary of terms
Wieczorek J, Bloom D, Guralnick R, Blum S, Döring M, De Giovanni R, Robertson T, and
Vieglais D (2012) Darwin Core: An Evolving Community-Developed Biodiversity Data Standard.
PLoS ONE 7(1): e29715. (doi:10.1371/journal.pone.0029715) 21
22. • Provide
a
shared
understanding
of
what
we
mean
when
describing
biodiversity
enHHes.
• What
kind
of
thing
or
property.
• A
list
of
things
we
as
a
community
can
agree
upon
the
meaning
of.
• “Concept
repository”
with
terms
idenHfied
by
URIs.
Vocabularies/ontologies
TDWG Technical Roadmap 2008 (convened by Roger Hyam).
Photo CC-by-3.0 by Hannes
Grobe/AWI. Palaeoclimate
archives.
22
24. Darwin
Core
Archive
(DwC-‐A)
v DwC-A publish Darwin Core records including
extensions
v Simple text based format
v Zipped single file archive
Germplasm.txt
24
25. Darwin
Core
star
schema
Germplasm
Breeder
Trait
… Audubon
core
Can relate elements
one-to-one or
one-to-many.
(1:many)
1:many1:many
1:many 1:many
26. Namespace (SKOS/RDF) (stable version)
http://purl.org/germplasm/germplasmTerm#
Code repository (stable version)
http://code.google.com/p/darwincore-germplasm
Community discussion (development version)
http://terms.tdwg.org/wiki/Germplasm
Darwin Core extension for germplasm
26
29. Darwin Core Archive Assistant (GBIF, 2010)
The Darwin Core Archive Assistant is a web application that presents a
simple interface for describing the data elements a data publisher wishes to
serve to the GBIF network as basic text files and composes the appropriate
XML descriptor file as defined in the Darwin Core Text Guidelines to
accompany them. It communicates with the GBIF registry to provide an up-
to-date listing of all relevant Darwin Core terms and available extensions
and presents these in a simple checklist format.
http://tools.gbif.org/dwca-assistant/ 29
33. The purpose of identifiers
…is to name things,
making it possible to refer to them.
What is an identifier:
“Each identifier refers to one and only one thing” (Coyle 2006).
“An association between a string and a thing” (Kunze 2003).
“A stated association between a symbol and a thing; that the
symbol may be used to unambiguously refer to the thing
within a given context” (Campbell 2007).
33
34. hip
–
PURL
–
UUID
hip://purl.org/cgngenis/accenumb/CGN00001
34
hip://purl.org/nhmuio/id/41d9cbb4-‐4590-‐4265-‐8079-‐ca44d46d27c3
35. UUID QR codes for all
museum objects at NHM-
UiO would provide:
• Machine-readable using an
ordinary smart phone (or PDA).
• Allows for new and efficient
workflows for collection
management.
• Deployment for stable identifiers
appropriate for data-basing.
35
40. Status for genebank datasets in GBIF, May 2014
Publisher
Dataset
Updated
Records
Georef
Bioversity
Interna1onal
The
European
Gene1c
Resources
Search
Catalogue
(EURISCO)
Dec
2,
2009
976
457
87
776
Bioversity
Interna1onal
The
System-‐wide
Informa1on
Network
for
Gene1c
Resources
(SINGER)
Oct
25,
2008
683
018
171
493
US
Na1onal
Plant
Germplasm
System
United
States
Na1onal
Plant
Germplasm
System
Collec1on
(USDA
GRIN)
Apr
29,
2009
313
949
66
267
Plant
Breeding
and
AcclimaHzaHon
InsHtute
(IHAR)
Polish
gene
bank
passport
data
of
plants
accessions
which
are
important
in
human
life
May
8,
2013
59
948
16
344
Plant
Breeding
and
AcclimaHzaHon
InsHtute
(IHAR)
Seed
collecHon
Dead
seeds
for
evaluaHon
and
observaHon
purposes
May
8,
2013
10
597
Plant
Breeding
and
AcclimaHzaHon
InsHtute
(IHAR)
Polish
seed
gene
bank
historical
passport
data
of
accessions
May
8,
2013
8
462
3
476
Nordic
GeneHc
Resource
Center
(NORDGEN)
Nordic
GeneHc
Resources
Jun
6,
2012
37
641
5
237
Centre
for
GeneHc
Resources,
The
Netherlands
Centre
for
GeneHc
Resources,
the
Netherlands,
PGR
passport
data
Apr
18,
2014
22
579
20
159
Dep
Plant
Biology,
Agronomy,
Univ
Politécnica
de
Madrid
Universidad
Politécnica
de
Madrid,
Dpto.
Biología
Vegetal,
Banco
de
Germoplasma
Sep
27,
2012
9
754
7
data
publishers
9
datasets
2
122
405
370
752
40
This
list
only
includes
the
datasets
classified
to
the
PGR
network:
hip://www.gbif.org/network/ae3a42e4-‐5829-‐4210-‐8d8a-‐84b0cbda47bc
41. “Things can happen in a band, or any
type of collaboration, that would not
otherwise happen” (Jim Coleman,
Jazz-musician).
41