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Enzymes
Ms. N.S.MODHAVE
ASSISTANT PROFESSOR
DEPT. OF PHARMACEUTICAL CHEMISTRY
• Give name of co-enzyme and its one biological functions of the
• following vitamins :
• (i) Thiamine hydrochloride
• (ii) Pyridoxin
• (iii) Riboflavin
• (iv) Nicotinamide
• Explain the following terms :
• (i) Adoptive enzymes
• (ii) Constitutive enzymes
• (iii) Isoenzymes
• (iv) Allosteric enzymes
• Explain four pharmaceutical and therapeutic uses of enzymes.
• Enzymes
• (ii) One unit of enzyme activity
• (iii) Turnover number of enzymes
• (iv) Specific activity of enzymes
• What is enzyme inhibition ? Give six points of difference between
• competitive inhibition of non-competitive inhibition.
• Enlist factors affecting rate of enzyme catalysed reaction. Explain in
• detail effect of substrate concentration with the help and curves and
• equations.
• What are co-enzymes ? Name co-enzymes derived from :
• (i) Vitamin B1
• (ii) Vitamin B3
Explain enzyme binding of a substrate with the help of suitable models.
Enlist various factors affecting rate of enzyme catalysed reaction. Explain in
detail role of temperature.
(i) Exoenzymes
(ii) Endoenzymes
(iii) Induced enzymes
(iv) Zymogens
What are enzyme ? How they are classified on the basis of type of reactions
catalysed by them ? Give diagnostic & therapeutic applications of enzyme.
• Mention the factors affecting rate of enzyme catalysed reactions. Explain effect of tem
• Define enzyme & classify them with example. perature and pH on enzyme catalysed reaction.
• What is an active site of an enzyme? Explain ‘lock and key model’ and ‘Induce Fit Model’.
• Enumerate the factors that affect the rate of enzyme catalysed
• reaction. Describe the effect of temperature and pH.
• What is meant by ‘marker enzymes’?
• What is enzyme inhibition? Explain competitive inhibition with example.
• Enlist factors affecting rate of enzyme catalysed reaction. Explain effect of temperature.
Enzymes (Biocatalysts)
Definition: substance that increase rate of chemical reaction without
itself undergoing any change in the overall process.
Properties:
• Enzymes are proteinous in nature
• They increase the rate of reaction by lowering the energy of
activation
• They catalyze nearly all the chemical reactions taking place in the
cells of the body
• Enzymes have unique three-dimensional shapes that fit the shapes
of reactants (substrates), essential for enzyme activity
• The functional unit of enz. Is known as holoenzyme (active
enzyme) = apoenzyme (protein part)+coenzyme (non-protein part)
Enzymes as Biological Catalysts
Naming Enzymes
• The name of an enzyme identifies the reacting substance
- usually ends in –ase
• For example, sucrase catalyzes the hydrolysis of sucrose
• The name also describes the function of the enzyme
• For example, oxidases catalyze oxidation reactions
• Sometimes common names are used, particularly for the
digestion enzymes such as pepsin and trypsin
• Some names describe both the substrate and the function
• For example, alcohol dehydrogenase oxides ethanol
Class Reaction Enzyme
Oxidoreductase Oxidation-reduction Cytochrome oxidase
L & D amino acid oxidase
Transferases Transfer of
functional group
Transaminase
Phosphorylase
Hydrolases Hydrolysis Lipase, pepsin, urease
Lyases Add /remove of
water ,ammonia,
CO2
Aldolase, Fumarase,
Histidase
Isomerases Isomerization
reaction
Retinol Isomerase
Phosphohexose isomerase
Ligase Synthetic reaction Glutamine synthetase
succinate thiokinase
Oxidoreductases, Transferases and Hydrolases
Lyases, Isomerases and Ligases
Active Site of an Enzyme
• The active site is a region within an
enzyme that fits the shape of
substrate molecules
• Active site made up of amino acid
• Active site regarded as pocket or
cleft
• Not rigid in shape
• Substrate binding site & catalytical
site
• Substrate bind at the active site by
weak non-covalent bonds
• Enzyme are specific in function
• E+S ES P + E
Enzyme Catalyzed Reactions
• When a substrate (S) fits properly in an active site, an
enzyme-substrate (ES) complex is formed:
E + S  ES
• Within the active site of the ES complex, the reaction
occurs to convert substrate to product (P):
ES  E + P
• The products are then released, allowing another substrate
molecule to bind the enzyme
- this cycle can be repeated millions (or even more) times
per minute
• The overall reaction for the conversion of substrate to
product can be written as follows:
E + S  ES  E + P
Example of an Enzyme Catalyzed Reaction
• The reaction for the sucrase catalyzed hydrolysis of sucrose to
glucose and fructose can be written as follows:
E + S  ES  E + P1 + P2
where E = sucrase, S = sucrose, P1 = glucose and P2 = fructose
Mechanism of Enzyme action
Lock-and-Key Model (Fischers template theory)
• In the lock-and-key model of enzyme action:
- the active site has a rigid shape
- only substrates with the matching shape can fit
- the substrate is a key that fits the lock of the active site
• This is an older model, however, and does not work for all
enzymes
Induced Fit Model (Koshland’s Model)
• In the induced-fit model of enzyme action:
- the active site is flexible, not rigid
- the shapes of the enzyme, active site, and substrate adjust to
maximumize the fit, which improves catalysis
- there is a greater range of substrate specificity
• This model is more consistent with a wider range of enzymes
Enzyme Specificity
• Enzyme are highly specific in their action
• Stereospecificity or Optical Specificity
• Reaction Specificity
• Substrate Specificity
Stereospecificity or Optical Specificity:
Eg. Glucokinase on D-Glucose
L- amino acid oxidase on L-amino acid
D- amino acid oxidase on D-amino acid
Reaction Specificity
Eg. Amino acid undergoes different reaction – transamination,
deamination, decarboxylation
Substarte Specificity
i) Absolute- eg.Glucokinase on glucose, urease on urea
ii) Relative- eg. Trypsin hydrolyse peptide linkage in arginine or
lysine
iii) Broad- eg. Hexokinase act on glucose, fructose, mannose and
glucosamine
Enzyme Inhibition
• Substance which binds with enzyme & brings about a
decrease in catalytic activity of that enzyme.
• Two broad categories
• Reversible inhibition
i) Competitive
ii) Non competitive
• Irreversible inhibition
Reversible Enzyme Inhibition
A reversible inhibitor is one that will cause a temporary loss of
enzymatic activity. This substance forms a non-covalent interaction
with the enzyme
. Reversible inhibitors can be
 Competitive inhibitor-is any compound that bears a structural
resemblance to a particular substrate and thus competes with
that substrate for binding at the active site of an enzyme
The inhibitor is not acted on by the enzyme but does prevent
the substrate from approaching the active site.
 Non-competitive inhibitor- A noncompetitive inhibitor attaches
at an allosteric site, which is any site on the enzyme that is not
the active site. The attachment of the non-competitive inhibitor to
the allosteric site results in a shift in three-dimensional structure
that alters the shape of the active site so that the substrate will no
longer fit in the active site properly
Reversible Enzyme Inhibition- Competitive and
Non competitive
Examples:
• Competitive inhibition:- methanol &
ethanol
• Non-Competitive- metals ions binds with
carboxyl group of Histidase
• Irreversible- Disulfiram(Antabuse)
Reversible Enzyme Inhibition
Irreversible Enzyme Inhibition
Example:
Factors affecting enzyme activity
• Concentration of enzyme
• Concentration of substrate
• Effect of Temperature
• Effect of pH (Hydrogen Ion Conc.)
• Effect of activators
• Effect of product conc.
• Effect of light and radiation
• Effect of time
Concentration of enzyme
Assuming a sufficient
concentration of substrate is
available, increasing enzyme
concentration will increase the
enzyme reaction rate.
Concentration of Substrate
• At a constant enzyme
concentration and at lower
concentrations of substrates, the
substrate concentration is the
limiting factor.
• As the substrate concentration
increases, the enzyme reaction
rate increases.
• At very high substrate
concentrations, the enzymes
become saturated with substrate
and a higher concentration of
substrate does not increase the
reaction rate.
Effect of Temp.
• Each enzyme has an optimum
temperature at which it works best.
• A higher temperature generally
results in an increase in enzyme
activity.
• As the temperature increases,
molecular motion increases
resulting in more molecular
collisions.
If, however, the temperature rises above a certain point, the heat will
denature the enzyme, causing it to lose its three-dimensional
functional shape by denaturing its hydrogen bonds. Cold
temperature, on the other hand, slows down enzyme activity by
decreasing molecular motion.
Effect of pH
• Each enzyme has an optimal
pH that helps maintain its
three-dimensional shape.
• Changes in pH may denature
enzymes by altering the
enzyme's charge.
• This alters the ionic bonds of
the enzyme that contribute to
its functional shape.
Effect of activators
For optimal activity, several enzymes require
inorganic metallic cations such as Mn2+, Mg2+,
Zn2+, Co2+, Ca2+, Cu2+, K+, Na+, and others.
Anions are occasionally needed for enzyme
function, such as a chloride ion (CI–) for
amylase.
Application of Enzyme
Clinical Application:
• Trypsin: Acute thrombophlebitis (Blood clot & inflammation in
vein)
• Streptokinase: Fibrinolysis and dissolution of clot
• Pepsin: Gastric achylia (Undeveloped gastric gland)
• Urokinase: Pulmonary embolism and myocardial infraction
• Asparginase: Leukemia
• Lysoenzymes : Eyes infection
• Galactosidase useful in treatment of
lactose intolerance.
Medicinal application:
• Sulphonamide - Antibacterial
• Allopurinol – Treat Gout
• Xanthin/ Hypoxanthin Xanthin oxidase Uric acid
Diagnostic Application
The enzyme whose presence or decrease or increase in level of blood,
CSF or urine indicates the presence of disease or disorder is known as
marker enzymes
1) Glutamate oxaloacetate transaminase in Myocardial infraction
2) Glutamate pyruvate transaminase in Hepatitis
3) Creatinin kinase in cardia infection
4) Lipase – Actute pancretitis
5) LDH- Infraction , Leukemia, carcinoma
Pharmaceutical Application:
• Penicilline acylase for Antibiotics production
• Papain enzyme used in production of protein hydrolysate
• Rennin is used for cheese preparation
• Glucose isomerase is used for production of syrup
• Alpha amylase is used in food industry to covert starch to
glucose
• Papain, pepsin and trypsin are used in preparation of digestants
Exoenzymes / Extracellular enzymes:
Secreted outside the cell
E.g..: proteoses, lipases.
Endoenzymes / Intracellular enzymes:
Present inside the cell
E.g..: synthetases, phosphorylases
Constitutive Enzymes:
Produced in absence of substrate. Constitutive enzymes are produced
in constant amounts without regard to the physiological demand or
the concentration of the substrate
Eg.: Enzymes of glycolytic series.
Induced Enzymes:
Produced in presence of substrate.
Eg.: hepatic microsomal enzymes.
• Zymogens/ Proenzyme
Produced naturally in an inactive form which can be activated
when required.
eg. Prothrombin – Thrombin, Pepsinogen- pepsin
• Isoenzyme:
Isoenzymes are different forms of an enzyme that catalyze the same
reaction in different tissues in the body
Eg.lactate dehydrogenase
• Coenzyme:
Nonprotein, organic substance required for some enzyme function
or activity of enzyme
Vitamin Water soluble Coenzyme
NonB-complex:VitaminC
(Ascorbic acid)
Ascorbic acid
B complex a) Vitamin B1-
Thiamine
Thiamine pyrophosphate
b) Vitamin B2- Riboflavin FAM ( Flavin mono dinucleotide),
FAD (Flavin adenine dinucleotide)
c) Vitamin B3- Niacin NAD( nicotinamide adenine dinucleotide),
NADP( nicotinamide adenine dinucleotide
phosphate ),
d) Vitamin B5- Pantothenic acid Coenzyme-A
e) Vitamin B6- Pyridoxine Pyridoxal phosphate
f) Vitamin B7- Biotin Biotin
g) Vitamin B9- Folic acid Tetrahydrofolate
h) Vitamin B12- Cyanocobalamin Deoxyadenosine cobalamin
Thank You

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Enzyme. defination ,classification and application

  • 2. • Give name of co-enzyme and its one biological functions of the • following vitamins : • (i) Thiamine hydrochloride • (ii) Pyridoxin • (iii) Riboflavin • (iv) Nicotinamide • Explain the following terms : • (i) Adoptive enzymes • (ii) Constitutive enzymes • (iii) Isoenzymes • (iv) Allosteric enzymes • Explain four pharmaceutical and therapeutic uses of enzymes. • Enzymes • (ii) One unit of enzyme activity • (iii) Turnover number of enzymes • (iv) Specific activity of enzymes • What is enzyme inhibition ? Give six points of difference between • competitive inhibition of non-competitive inhibition. • Enlist factors affecting rate of enzyme catalysed reaction. Explain in • detail effect of substrate concentration with the help and curves and • equations. • What are co-enzymes ? Name co-enzymes derived from : • (i) Vitamin B1 • (ii) Vitamin B3
  • 3. Explain enzyme binding of a substrate with the help of suitable models. Enlist various factors affecting rate of enzyme catalysed reaction. Explain in detail role of temperature. (i) Exoenzymes (ii) Endoenzymes (iii) Induced enzymes (iv) Zymogens What are enzyme ? How they are classified on the basis of type of reactions catalysed by them ? Give diagnostic & therapeutic applications of enzyme.
  • 4. • Mention the factors affecting rate of enzyme catalysed reactions. Explain effect of tem • Define enzyme & classify them with example. perature and pH on enzyme catalysed reaction. • What is an active site of an enzyme? Explain ‘lock and key model’ and ‘Induce Fit Model’. • Enumerate the factors that affect the rate of enzyme catalysed • reaction. Describe the effect of temperature and pH. • What is meant by ‘marker enzymes’? • What is enzyme inhibition? Explain competitive inhibition with example. • Enlist factors affecting rate of enzyme catalysed reaction. Explain effect of temperature.
  • 5. Enzymes (Biocatalysts) Definition: substance that increase rate of chemical reaction without itself undergoing any change in the overall process. Properties: • Enzymes are proteinous in nature • They increase the rate of reaction by lowering the energy of activation • They catalyze nearly all the chemical reactions taking place in the cells of the body • Enzymes have unique three-dimensional shapes that fit the shapes of reactants (substrates), essential for enzyme activity • The functional unit of enz. Is known as holoenzyme (active enzyme) = apoenzyme (protein part)+coenzyme (non-protein part)
  • 7. Naming Enzymes • The name of an enzyme identifies the reacting substance - usually ends in –ase • For example, sucrase catalyzes the hydrolysis of sucrose • The name also describes the function of the enzyme • For example, oxidases catalyze oxidation reactions • Sometimes common names are used, particularly for the digestion enzymes such as pepsin and trypsin • Some names describe both the substrate and the function • For example, alcohol dehydrogenase oxides ethanol
  • 8. Class Reaction Enzyme Oxidoreductase Oxidation-reduction Cytochrome oxidase L & D amino acid oxidase Transferases Transfer of functional group Transaminase Phosphorylase Hydrolases Hydrolysis Lipase, pepsin, urease Lyases Add /remove of water ,ammonia, CO2 Aldolase, Fumarase, Histidase Isomerases Isomerization reaction Retinol Isomerase Phosphohexose isomerase Ligase Synthetic reaction Glutamine synthetase succinate thiokinase
  • 11. Active Site of an Enzyme • The active site is a region within an enzyme that fits the shape of substrate molecules • Active site made up of amino acid • Active site regarded as pocket or cleft • Not rigid in shape • Substrate binding site & catalytical site • Substrate bind at the active site by weak non-covalent bonds • Enzyme are specific in function • E+S ES P + E
  • 12. Enzyme Catalyzed Reactions • When a substrate (S) fits properly in an active site, an enzyme-substrate (ES) complex is formed: E + S  ES • Within the active site of the ES complex, the reaction occurs to convert substrate to product (P): ES  E + P • The products are then released, allowing another substrate molecule to bind the enzyme - this cycle can be repeated millions (or even more) times per minute • The overall reaction for the conversion of substrate to product can be written as follows: E + S  ES  E + P
  • 13. Example of an Enzyme Catalyzed Reaction • The reaction for the sucrase catalyzed hydrolysis of sucrose to glucose and fructose can be written as follows: E + S  ES  E + P1 + P2 where E = sucrase, S = sucrose, P1 = glucose and P2 = fructose
  • 15. Lock-and-Key Model (Fischers template theory) • In the lock-and-key model of enzyme action: - the active site has a rigid shape - only substrates with the matching shape can fit - the substrate is a key that fits the lock of the active site • This is an older model, however, and does not work for all enzymes
  • 16. Induced Fit Model (Koshland’s Model) • In the induced-fit model of enzyme action: - the active site is flexible, not rigid - the shapes of the enzyme, active site, and substrate adjust to maximumize the fit, which improves catalysis - there is a greater range of substrate specificity • This model is more consistent with a wider range of enzymes
  • 17. Enzyme Specificity • Enzyme are highly specific in their action • Stereospecificity or Optical Specificity • Reaction Specificity • Substrate Specificity
  • 18. Stereospecificity or Optical Specificity: Eg. Glucokinase on D-Glucose L- amino acid oxidase on L-amino acid D- amino acid oxidase on D-amino acid Reaction Specificity Eg. Amino acid undergoes different reaction – transamination, deamination, decarboxylation Substarte Specificity i) Absolute- eg.Glucokinase on glucose, urease on urea ii) Relative- eg. Trypsin hydrolyse peptide linkage in arginine or lysine iii) Broad- eg. Hexokinase act on glucose, fructose, mannose and glucosamine
  • 19. Enzyme Inhibition • Substance which binds with enzyme & brings about a decrease in catalytic activity of that enzyme. • Two broad categories • Reversible inhibition i) Competitive ii) Non competitive • Irreversible inhibition
  • 20. Reversible Enzyme Inhibition A reversible inhibitor is one that will cause a temporary loss of enzymatic activity. This substance forms a non-covalent interaction with the enzyme . Reversible inhibitors can be  Competitive inhibitor-is any compound that bears a structural resemblance to a particular substrate and thus competes with that substrate for binding at the active site of an enzyme The inhibitor is not acted on by the enzyme but does prevent the substrate from approaching the active site.  Non-competitive inhibitor- A noncompetitive inhibitor attaches at an allosteric site, which is any site on the enzyme that is not the active site. The attachment of the non-competitive inhibitor to the allosteric site results in a shift in three-dimensional structure that alters the shape of the active site so that the substrate will no longer fit in the active site properly
  • 21. Reversible Enzyme Inhibition- Competitive and Non competitive
  • 22. Examples: • Competitive inhibition:- methanol & ethanol • Non-Competitive- metals ions binds with carboxyl group of Histidase • Irreversible- Disulfiram(Antabuse) Reversible Enzyme Inhibition
  • 24. Factors affecting enzyme activity • Concentration of enzyme • Concentration of substrate • Effect of Temperature • Effect of pH (Hydrogen Ion Conc.) • Effect of activators • Effect of product conc. • Effect of light and radiation • Effect of time
  • 25. Concentration of enzyme Assuming a sufficient concentration of substrate is available, increasing enzyme concentration will increase the enzyme reaction rate.
  • 26. Concentration of Substrate • At a constant enzyme concentration and at lower concentrations of substrates, the substrate concentration is the limiting factor. • As the substrate concentration increases, the enzyme reaction rate increases. • At very high substrate concentrations, the enzymes become saturated with substrate and a higher concentration of substrate does not increase the reaction rate.
  • 27. Effect of Temp. • Each enzyme has an optimum temperature at which it works best. • A higher temperature generally results in an increase in enzyme activity. • As the temperature increases, molecular motion increases resulting in more molecular collisions. If, however, the temperature rises above a certain point, the heat will denature the enzyme, causing it to lose its three-dimensional functional shape by denaturing its hydrogen bonds. Cold temperature, on the other hand, slows down enzyme activity by decreasing molecular motion.
  • 28. Effect of pH • Each enzyme has an optimal pH that helps maintain its three-dimensional shape. • Changes in pH may denature enzymes by altering the enzyme's charge. • This alters the ionic bonds of the enzyme that contribute to its functional shape.
  • 29. Effect of activators For optimal activity, several enzymes require inorganic metallic cations such as Mn2+, Mg2+, Zn2+, Co2+, Ca2+, Cu2+, K+, Na+, and others. Anions are occasionally needed for enzyme function, such as a chloride ion (CI–) for amylase.
  • 30. Application of Enzyme Clinical Application: • Trypsin: Acute thrombophlebitis (Blood clot & inflammation in vein) • Streptokinase: Fibrinolysis and dissolution of clot • Pepsin: Gastric achylia (Undeveloped gastric gland) • Urokinase: Pulmonary embolism and myocardial infraction
  • 31.
  • 32. • Asparginase: Leukemia • Lysoenzymes : Eyes infection • Galactosidase useful in treatment of lactose intolerance.
  • 33. Medicinal application: • Sulphonamide - Antibacterial • Allopurinol – Treat Gout • Xanthin/ Hypoxanthin Xanthin oxidase Uric acid Diagnostic Application The enzyme whose presence or decrease or increase in level of blood, CSF or urine indicates the presence of disease or disorder is known as marker enzymes 1) Glutamate oxaloacetate transaminase in Myocardial infraction 2) Glutamate pyruvate transaminase in Hepatitis 3) Creatinin kinase in cardia infection 4) Lipase – Actute pancretitis 5) LDH- Infraction , Leukemia, carcinoma
  • 34. Pharmaceutical Application: • Penicilline acylase for Antibiotics production • Papain enzyme used in production of protein hydrolysate • Rennin is used for cheese preparation • Glucose isomerase is used for production of syrup • Alpha amylase is used in food industry to covert starch to glucose • Papain, pepsin and trypsin are used in preparation of digestants
  • 35. Exoenzymes / Extracellular enzymes: Secreted outside the cell E.g..: proteoses, lipases. Endoenzymes / Intracellular enzymes: Present inside the cell E.g..: synthetases, phosphorylases Constitutive Enzymes: Produced in absence of substrate. Constitutive enzymes are produced in constant amounts without regard to the physiological demand or the concentration of the substrate Eg.: Enzymes of glycolytic series. Induced Enzymes: Produced in presence of substrate. Eg.: hepatic microsomal enzymes.
  • 36. • Zymogens/ Proenzyme Produced naturally in an inactive form which can be activated when required. eg. Prothrombin – Thrombin, Pepsinogen- pepsin • Isoenzyme: Isoenzymes are different forms of an enzyme that catalyze the same reaction in different tissues in the body Eg.lactate dehydrogenase • Coenzyme: Nonprotein, organic substance required for some enzyme function or activity of enzyme
  • 37. Vitamin Water soluble Coenzyme NonB-complex:VitaminC (Ascorbic acid) Ascorbic acid B complex a) Vitamin B1- Thiamine Thiamine pyrophosphate b) Vitamin B2- Riboflavin FAM ( Flavin mono dinucleotide), FAD (Flavin adenine dinucleotide) c) Vitamin B3- Niacin NAD( nicotinamide adenine dinucleotide), NADP( nicotinamide adenine dinucleotide phosphate ), d) Vitamin B5- Pantothenic acid Coenzyme-A e) Vitamin B6- Pyridoxine Pyridoxal phosphate f) Vitamin B7- Biotin Biotin g) Vitamin B9- Folic acid Tetrahydrofolate h) Vitamin B12- Cyanocobalamin Deoxyadenosine cobalamin