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Amparo Elizabeth Cano Basave1, Francesco
Osborne2, Angelo Salatino2
1 Aston University, United Kingdom
2 KMi, The Open University, United Kingdom
EKAW 2016
Ontology	Forecasting	in	Scientific	Literature:	
Semantic	Concepts	Prediction	based	on	
Innovation-Adoption	Priors
22
Osborne, F., Motta, E. and Mulholland, P.
Exploring scholarly data with Rexplore.
International Semantic Web Conference 2013
technologies.kmi.open.ac.uk/rexplore/
The	Computer	Science	Ontology	1
• Not	fine-grained	enough.
– E.g.,	only	2	topics	are	classified	under	Semantic	Web	
• Static,	manually	defined,	hence	prone	to	get	obsolete	very	
quickly.
3
Standard	research	areas	taxonomies/classifications/ontologies	
such	as	ACM	are	not	apt	to	the	task.	
ACM 2012
The	Computer	Science	Ontology	(CSO)	was	automatically	
created	and	updated	by	applying	the	Klink-2	algorithm.
Osborne, F. and Motta, E.: Klink-2: integrating multiple web sources to generate
semantic topic networks. In ISWC 2015. (2015)
The	Computer	Science	Ontology	2
• We	automatically	generated	a	version	of	CSO	consisting	of	about		
15,000	topics linked	by	about	70,000	semantic	relationships.
• It	included	very	granular	and	low	level	research	areas	and	it	can	be	
regularly	updated	by	running	Klink-2	on	a	new	set	of	publications.
• We	also	have	different	versions	of	CSO	obtained	by	running	Klink-2	
on	the	set	of	documents	up	to	a	certain	year.
5
The	Computer	Science	Ontology	3
5
CSO 2012 CSO 2013 CSO 2014 CSO 2015
[…]
A	shared	conceptualization	
“Ontologies	are	a	formal,	explicit	specification	of	a	shared	
conceptualization”	(Studer et	al.,	1998)
“The	conceptualization	should	express	a	shared	view	between	
several	parties,	a	consensus	rather	than	an	individual	view“	
(Guarino at	al,	2009)
“Ontologies	are	us:	inseparable	from	the	context	of	the	
community	in	which	they	are	created	and	used.”	(Mika,	2005)
“Ontology	Evolution	is	the	timely	adaptation	of	an	ontology	to	
the	arisen	changes	and	the	consistent	propagation	of	these	
changes	to	dependent	artefacts.”	(Stojanovic,	2004)
6
But	what	if	we	cannot	wait	for	shared	consensus?
These	ontologies	reflect	the	past,	and	can	only	contain	concepts	
that	are	already	popular	enough	to	be	selected	by	experts	or	
automatic	methods.
Hence,	they	hardly	support	tasks	which	involve	the	ability	to	
describe	emerging	concepts,	e.g.:
• Exploring	the	forefront	of	research;
• Trend	detection;
• Horizon	scanning;
• Producing	smart	analytics	to	inform	business	decision.
77
Ontology	Forecasting
Given	an	ontology	in	time	t,	a	team	of	experts	and/or	a	software	
consider	a	number	of	relevant	knowledge	sources	and	update	
the	ontology	by	also	including	new	concepts	on	which	there	will	
be (probably)	a	shared	consensus	in	time	t+1.	
For	example,	a	forecasted	ontology	of	research	topics	in	2000	may	already	
include	a	new	topic	associated	to	the	dynamics	preluding	to	the	“Semantic	
Web”	(new	collaborations	between	Knowleged Base	Systems,	AI	and	WWW)
8
[…]
t-n t-1 t t+1
Contributions	– a	first	step	towards	ontology	forecasting	
1. We	approach	the	novel	task	of	ontology	forecasting	by	
predicting	semantic	concepts	in	the	research	domain.
2. We	introduce	metrics	to	analyse	the	linguistic	and	semantic	
progressiveness	in	scholarly	data.
3. We	propose Semantic	Innovation	Forecast	(SIF) a	novel	
weakly-supervised	approach	for	the	forecasting	of	emerging	
semantic	concepts.
4. We	evaluate	our	approach	in	a	dataset	of	over	1	million	
documents	in	the	Computer	Science	domain.
– The	proposed	framework	offers	competitive	boosts	in	mean	average	
precision	at	ten	for	forecasts	over	5	years.
9
Scopus	(Computer	Science)	- #	of	publications
10
0
50000
100000
150000
200000
250000
1 9 9 5 1 9 9 7 1 9 9 9 2 0 0 1 2 0 0 3 2 0 0 5 2 0 0 7
NUMBE	R	OF	ARTICLES
YEAR
Scopus	(Computer	Science) – vocabulary	size
11
0
20000
40000
60000
80000
100000
120000
140000
160000
1 9 9 5 1 9 9 7 1 9 9 9 2 0 0 1 2 0 0 3 2 0 0 5 2 0 0 7
VOCABULARY	SIZE
YEAR
Klink-2	Computer	Science	Ontology	- #	of	classes
12
Linguistic	Progressiveness
Language	innovation	in	a	corpus	refers	to	the	introduction	of	
novel	patterns	of	language.
We	generate	a	language	model	per	year	using	Katz	back-off	
smoothing	language	model	and	analyzed	differences	between	
consecutive	years	by	using	the	perplexity metric.	
13
0
2E+10
4E+10
6E+10
8E+10
1E+11
1.2E+11
1.4E+11
1 9 9 5 1 9 9 7 1 9 9 9 2 0 0 1 2 0 0 3 2 0 0 5 2 0 0 7
PERPLEXITY
YEAR
Linguistic	Progressiveness
We	also	perform	a	progressive	analysis	based	on	lexical	
innovation	and	lexical	adoption.
A	large	number	of	new	words	appear	each	year,	but	only	few	of	
them	are	adopted	(i.e.,	still	used	in	the	following	year).	
14
0
10000
20000
30000
40000
50000
60000
70000
1 9 9 7 1 9 9 9 2 0 0 1 2 0 0 3 2 0 0 5 2 0 0 7
NUMBER	OF	WORDS
YEAR
# of new words per year
# of adopted words per year
Measure	Linguistic	Progressiveness
15
0
0.05
0.1
0.15
0.2
0.25
0.3
0.35
1 9 9 7 1 9 9 9 2 0 0 1 2 0 0 3 2 0 0 5 2 0 0 7
LINGUISTIC	PROGRESSIVENESS
YEAR
We introduce the linguistic progressiveness metric:
𝑳𝑷 𝒕 =
𝑳𝑨 𝒕
𝑳𝑰 𝒕
Innovation-Adoption	Priors	
We	assume	that	emerging	topics	will	be	associated	with	novel	
words,	thus	we	compute	priors	in	time	t	by	considering	
innovative	(LI)	and	adopted	words	(LA).	
A	word	prior	is	a	probability	distribution	that	expresses	a	word	
relevance	to		- in	this	case	- being	characteristic	of	innovative	
topics.
We	build	the	prior	matrix	by	assigning	a	weight	to	each	term	in	
this	vocabulary.
– 0.7	if	w	∈ LIt−2 and	0.9	if	w	∈ LAt−1.	Because	our	analysis	shows	that	
recently	adopted	words	(LA)	are	more	often	associated	with	emerging	
topics	than	new	words	(LI).	
16
Semantic	Innovation	Forecast	(SIF)	model
SIF	is	a	generative	probabilistic	topic	model that	takes	in	input	a	
set	of	documents	at	year	t	and	a	set	of	historical	priors	and	
forecast	topic	word	distributions	representing	new	concepts	in	
the	ontology	Ot+1.	
17
Semantic	Innovation	Forecast	(SIF)	model	
18
We	use	Collapsed	Gibbs	Sampling	to	infer	the	model	parameters	
and	topic	assignments	for	a	corpus	at	year	t	+	1	given	observed	
documents	at	year	t.
Evaluation
We	perform	this	task	by	applying	our	framework	on	the	Scopus	
dataset	for	Computer	Science	(	>	1M	publications).
Each	collection	of	documents	in	a	year	is	randomly	partitioned	
into	three	subsets:	20%	is	used	to	derive	innovation	priors,	40%	
training	set,	40%	testing	set.
We	train	a	SIF	model	on	year	t	using	innovative	priors	computed	
for	the	two	previous	years	(t-1	and	t-2)	and	we	use	the	SIF	
model	to	forecast	semantic	concepts	at	year	t	+	1.
We	then	measure	compute	the	cosine	similarity	between	the	
predicted	semantic	concepts	for	t	+	1	and	the	gold	standard	
concepts	for	that	year.	We	consider	a	concept	correctly	
forecasted	if	the	similarity	with	a	GS	concept	is	higher	than	0.5.	 19
Evaluation	- Baselines
We	compare	SIF	against	four	baselines.	For	a	year	t	forecasting	
for	year	t	+	1:	
1. LDA	Topics	(LDA) on	the	full	training	set.	This	setting	makes	
no	assumption	over	innovative/adopted	lexicons.
2. LDA	Innovative	Topics	(LDA-I);	computes	topics	based	on	
documents	containing	at	least	one	word	appearing	in	LIt.
3. LDA	Adopted	Topics	(LDA-A);	computes	topics	based	only	
on	documents	containing	at	least	one	word	appearing	in	LAt.
4. LDA	Innovation/Adoption	Topics	(LDA-IA); computes	topics	
based	only	on	documents	containing	at	least	one	word	
appearing	in	LIt or	LAt.
20
Evaluation	- Mean	Average	Precision	@	10
21
Year SIF LDA LDA-A LDA-I LDA-IA
2000 0.70 0.12 0.48 0 0.41
2002 0.87 0 0.82 0.64 0.75
2004 0.91 0 0.58 0.57 0.63
2006 0.87 0.31 0.78 0.84 0.69
2008 0.99 0.40 0.68 0.57 0.70
AVG 0.87 0.17 0.67 0.52 0.64
Conclusion
It	is	possible	to	forecast	reliably	emerging	semantic	
concepts	if	the	ontology	is	associated	with	a	large	
collection	of	document.	
The	next	challenge	is	to	forecast	new	version	of	an	
ontology,	that	is	to	produce	an	ontology	that	includes	
all	concepts	and	relationships	that	will	be	(probably)	
included	in	the	new	version.
22
Future	works
• Integration	of	explicit	and	latent	semantics;
• Including	graph-structure	information	into	the	
model;
• Understanding	how	research	topics	are	created	and	
forecast	topic	trends.
23
Salatino, A.A., Osborne, F., Motta, E. (2016) How are topics
born? Understanding the research dynamics preceding the
emergence of new areas. PeerJ Preprints
Francesco Osborne Angelo SalatinoAmparo Cano Basave
Elizabeth Cano-Basave, A. E., Osborne, F., Salatino, A.A.
(2016) Ontology Forecasting in Scientific Literature: Semantic
Concepts Prediction based on Innovation-Adoption Priors.
EKAW 2016, Bologna, Italy
Email: francesco.osborne@open.ac.uk
Twitter: FraOsborne
Site: people.kmi.open.ac.uk/francesco
EKAW 2016 - Ontology Forecasting in Scientific Literature: Semantic Concepts Prediction Based on Innovation-Adoption Priors

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