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CBB 518
Elements of Systems Biology
Vikram Singh
CCBB, SoLS, CUHP
Elements of Systems Biology by Dr. Vikram Singh is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
License.
Course Objectives
• This course will be centered on (i) the theoretical and practical aspects of
modelling in systems biology – both deterministic and stochastic and (ii) the study
of biological networks. Students will become acquainted with the key concepts
and computational approaches of both these fields.
• “Systems Biology” finds its major application in the research field known as
“Synthetic Biology” (aiming to design and realize modified or new biological
parts). Students will also become familiar with necessary mathematical and
computational concepts of Synthetic Biology.
• Students having prior knowledge of any programming language will be
encouraged to write their own codes for simulating and analysing model
biological systems.
Course Contents
Unit 1: Introductory Interdisciplinary Concepts (10 hours)
Unit 2: Deterministic Modelling in Systems Biology (10 hours)
Unit 3: Stochastic Modelling in Systems Biology (8 hours)
Unit 4: Design principles of Biological Networks (6 hours)
UNIT 5: Analysis of Biological Networks (6 Hours)
Attendance Requirements
Students are expected to attend all lectures in order to be able to fully
benefit from the course. A minimum of 75% attendance is a must
failing which a student will not be permitted to appear in
examination.
Evaluation Criteria
1. Mid Term Examination: 25%
2. End Term Examination: 50%
3. Continuous Internal Assessment: 25%
• Class Participation 5%
• Class Test 5%
• Presentation and Assignment 15%

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Course intro

  • 1. CBB 518 Elements of Systems Biology Vikram Singh CCBB, SoLS, CUHP Elements of Systems Biology by Dr. Vikram Singh is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
  • 2. Course Objectives • This course will be centered on (i) the theoretical and practical aspects of modelling in systems biology – both deterministic and stochastic and (ii) the study of biological networks. Students will become acquainted with the key concepts and computational approaches of both these fields. • “Systems Biology” finds its major application in the research field known as “Synthetic Biology” (aiming to design and realize modified or new biological parts). Students will also become familiar with necessary mathematical and computational concepts of Synthetic Biology. • Students having prior knowledge of any programming language will be encouraged to write their own codes for simulating and analysing model biological systems.
  • 3. Course Contents Unit 1: Introductory Interdisciplinary Concepts (10 hours) Unit 2: Deterministic Modelling in Systems Biology (10 hours) Unit 3: Stochastic Modelling in Systems Biology (8 hours) Unit 4: Design principles of Biological Networks (6 hours) UNIT 5: Analysis of Biological Networks (6 Hours)
  • 4. Attendance Requirements Students are expected to attend all lectures in order to be able to fully benefit from the course. A minimum of 75% attendance is a must failing which a student will not be permitted to appear in examination.
  • 5. Evaluation Criteria 1. Mid Term Examination: 25% 2. End Term Examination: 50% 3. Continuous Internal Assessment: 25% • Class Participation 5% • Class Test 5% • Presentation and Assignment 15%